• Title/Summary/Keyword: Rare Class

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Endolichenic Fungal Community Analysis by Pure Culture Isolation and Metabarcoding: A Case Study of Parmotrema tinctorum

  • Yang, Ji Ho;Oh, Seung-Yoon;Kim, Wonyong;Hur, Jae-Seoun
    • Mycobiology
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    • v.50 no.1
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    • pp.55-65
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    • 2022
  • Lichen is a symbiotic mutualism of mycobiont and photobiont that harbors diverse organisms including endolichenic fungi (ELF). Despite the taxonomic and ecological significance of ELF, no comparative investigation of an ELF community involving isolation of a pure culture and high-throughput sequencing has been conducted. Thus, we analyzed the ELF community in Parmotrema tinctorum by culture and metabarcoding. Alpha diversity of the ELF community was notably greater in metabarcoding than in culture-based analysis. Taxonomic proportions of the ELF community estimated by metabarcoding and by culture analyses showed remarkable differences: Sordariomycetes was the most dominant fungal class in culture-based analysis, while Dothideomycetes was the most abundant in metabarcoding analysis. Thirty-seven operational taxonomic units (OTUs) were commonly observed by culture-and metabarcoding-based analyses but relative abundances differed: most of common OTUs were underrepresented in metabarcoding. The ELF community differed in lichen segments and thalli in metabarcoding analysis. Dissimilarity of ELF community intra lichen thallus increased with thallus segment distance; inter-thallus ELF community dissimilarity was significantly greater than intra-thallus ELF community dissimilarity. Finally, we tested how many fungal sequence reads would be needed to ELF diversity with relationship assays between numbers of lichen segments and saturation patterns of OTU richness and sample coverage. At least 6000 sequence reads per lichen thallus were sufficient for prediction of overall ELF community diversity and 50,000 reads per thallus were enough to observe rare taxa of ELF.

Experimental Analysis of Bankruptcy Prediction with SHAP framework on Polish Companies

  • Tuguldur Enkhtuya;Dae-Ki Kang
    • International journal of advanced smart convergence
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    • v.12 no.1
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    • pp.53-58
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    • 2023
  • With the fast development of artificial intelligence day by day, users are demanding explanations about the results of algorithms and want to know what parameters influence the results. In this paper, we propose a model for bankruptcy prediction with interpretability using the SHAP framework. SHAP (SHAPley Additive exPlanations) is framework that gives a visualized result that can be used for explanation and interpretation of machine learning models. As a result, we can describe which features are important for the result of our deep learning model. SHAP framework Force plot result gives us top features which are mainly reflecting overall model score. Even though Fully Connected Neural Networks are a "black box" model, Shapley values help us to alleviate the "black box" problem. FCNNs perform well with complex dataset with more than 60 financial ratios. Combined with SHAP framework, we create an effective model with understandable interpretation. Bankruptcy is a rare event, then we avoid imbalanced dataset problem with the help of SMOTE. SMOTE is one of the oversampling technique that resulting synthetic samples are generated for the minority class. It uses K-nearest neighbors algorithm for line connecting method in order to producing examples. We expect our model results assist financial analysts who are interested in forecasting bankruptcy prediction of companies in detail.

A Study on the Perception and Application of Distance Learning Method to Cooking Practice Subject - College Students with Cuisine-Related Majors in Seoul and Gyeonggi Areas - (조리실기과목에 대한 원격교육방법 활용현황과 인식 조사 - 서울.경기지역 외식조리관련전공 2년제 대학생을 대상으로 -)

  • Kang, Jae-Hee
    • Journal of the Korean Society of Food Culture
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    • v.25 no.6
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    • pp.661-670
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    • 2010
  • Although many studies have suggested that introducing the distance learning method, including Web-based learning, to a practice class is effective, studies applying the distance learning method to subjects who are practicing cooking are rare. The purpose of this study was to determine the perception of the distance learning method, the degree of computer use, and the use of distance learning by college students with cuisine-related majors to practice cooking. The results showed that most students used the distance learning method, and that the method was positively perceived, as it was a great aid in learning. Most of the cooking information was obtained through the internet, and the most effective learning media for practicing cooking was "e-learning" using a computer. The most effective learning method for those who were practicing cooking was a "face-to-face learning method", because face-to-face type of teaching and learning was most universally recognized. Most of the students surveyed responded that using the distance learning method was a positive experience, indicating that cyber lectures could be applied at more universities for subjects practicing cooking.

The role of the orthodontist in diagnosis of hyperparathyroidism : rare case with general root resorption (부갑상선 기능항진증 진단에서의 교정의사의 역할 : 치근흡수를 동반한 희귀증례)

  • Cha, Bong-Kuen;Lee, Suk-Kuen
    • The korean journal of orthodontics
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    • v.30 no.6 s.83
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    • pp.669-675
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    • 2000
  • Excessive production of parathyroid hormone causes bony disorder such as periosteal bone resorption and bone pain due to excessive skeletal demineralization. A Class III facial deformity case with generalized root resorption presented bete was fumed out to be due to hyperparathyroidism. Clinical and cephalometric analysis revealed a straight skeletal profile with a retruded maxilla and a prognathic mandible. The x-ray findings demonstrated generalized root resorption of entire dentition to different degree. There also appeared osteoporosis like immature trabecular structure with the evidence of ground glass appearance. Serum test showed elevated 1evel of parathyroid hormone and growth hormone. Change of cranial growth by hyperparathyroidism can be dependent up(In a decreased bone apposition in viscerocranial growth site and abnormalities in cranial suture growth. It is possible to hypothesize that growth retardation of maxilla at least partially be accounted lot hyperparathyroidism. Therefore, regarding to the definite etiology of skeletal Class III and orthodontic treatment planning considering root resorption and osteoporosis, the early diagnosis for the hyperparathyroidism should be carefully carried by clinical and laboratory studies.

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Students' Characteristics of the Reflective Inquiry Dispositions According to the Modes of Interaction of Small Group in High School Earth Science Inquiry Class (고등학교 지구과학 탐구활동에서 소그룹의 상호작용 양식에 따른 학생들의 반성적 탐구의 특성)

  • Park, Mi-Ra;Jeong, Jin-Woo;Cheong, Cheol
    • Journal of The Korean Association For Science Education
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    • v.26 no.7
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    • pp.843-855
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    • 2006
  • The purpose of this study was to understand the substance of the reflective inquiry of students and obtain educational suggestion to the inquiry class for the promotion of the reflective inquiry, by checking out which characteristics the reflective inquiry showed according to the modes of interaction of small group in highschool earth science inquiry class. The result of study is shown as follows. At the stage of developmentand conclusion, the reflective inquiry relating the task context to data context was often appeared on the group of the modes of comfort interaction, but it was very rare on the group of modes of confrontation interaction. And the reflective inquiry scale value of the latter was two times lower than the former, The comfort group showed much more reflective inquiry statements quantitatively and performed much more meaningful reflective inquiry relating the task context to the data context. The heterogeneous group in the inquiry ability and the cognitive style showed confrontation interaction modes in the affective domain, having the most negative influence on the reflective inquiry. The homogeneous group both in the cognitive style and the inquiry ability showed the comfort interaction mode, having positive int1uence on the reflective inquiry.

Study on Vascular Plants of the Gosan Recreational Forest in Jeonbuk -A Case Study of Wild Plants except Planted Plants- (전북 고산자연휴양림 일대의 관속식물상 연구 -식재종을 제외한 야생식물을 중심으로-)

  • Kim, Young-Ha;Beon, Mu-Sup;Oh, Hyun-Kyung
    • Korean Journal of Plant Resources
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    • v.19 no.5
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    • pp.617-627
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    • 2006
  • The wild plants of the studied area in the Gosan recreational forest was listed 327 taxa: 99 families, 252 genera, 289 species,1 subspecies, 34 varieties and 3 forms. Based on the list of the rare plants by the Forest Research Institute, 2 taxa were recorded in the studied areas; Lilium distichum (Presevation priority order: No. 159), Aristolochia contorta (No. 151) and based on the list of Korean endemic plants, 4 taxa were recorded; Cephalotaxus koreana, Carex okamotoi, Salix purpurea var. japonica, Weigela subsessilis. Specific plant species by floral region were total 21 taxa; 2 taxa (Asperula lasiantha, Lonicera subhispida) in class III, 4 taxa (Lilium distichum, Potentilla dickinsii, Caryopteris incana, Ligularia fischeri) in class II, 15 taxa (Hosta capitata, Alnus hirsuta, Ribes mandshuricum, Cayratia japonica, Vaccinium oldhami, etc.) in class I. The naturalized plants in this site were 12 families, 28 genera, 31 species, 1 varieties, 32 taxa and naturalization rate was 9.8%. So, wild plants disturbing ecosystem like Ambrosia artemisiifolia var. elatior have been increasing and it needs continuing control and conservation measures on the plant ecosystem.

Evaluation of Cavity Wall Adaptation of Bulk-fill Resin Composites in Class II Cavities of Primary Molar (유구치 2급 와동에서 bulk-fill 복합레진의 와동적합성 평가)

  • Bae, Youngeun;Shin, Jonghyun;Kim, Shin;Jeong, Taesung;Kim, Jiyeon
    • Journal of the korean academy of Pediatric Dentistry
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    • v.44 no.4
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    • pp.446-454
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    • 2017
  • Recently, there have been many studies on bulk-fill resin composites. However, studies on the proper materials for pediatric patients are rare. The aim of this study was to compare the cavity wall adaptation of bulk-fill resin composites with conventional resin composite in class II cavities of primary molars using microcomputed tomography (micro-CT). Standardized class II slot cavities were prepared in 80 exfoliated primary molars and randomly divided into 4 groups. The control group was restored with conventional resin composite, Filtek Z-350 XT (FZ), and the three groups were restored with bulk-fill resin composites, Filtek bulk-fill posterior (FB), Tetric N-Ceram Bulk Fill (TNC), Filtek bulk-fill flowable (FBF). All specimens were thermocycled and then immersed in 50% silver nitrate ($AgNO_3$) solution. Micro-CT was used to measure the penetration volume of the total silver nitrate and the degree of cervical marginal leakage and the number, size, and position of the voids were evaluated. The results revealed that the volume of silver nitrate were significantly different between FB and FZ (p < 0.05). The results also revealed that the penetration length of silver nitrate FBF showed statistically lower than the FZ and FB (p < 0.05). There was no significant difference between the groups in number and size of voids. In conventional resin composite, most of the voids were present inside the restoration (83.3%), but the voids in the bulk-fill resin composites incidence were higher in the gingivoaxial angle. The cavity wall adaptation demonstrated in class II restorations of primary molar by new bulk fill resin composites was similar to conventional incremental technique. Bulk-fill resin composites might be an clinical option for a faster restoration in deciduous teeth.

A Study on Improvement through Functionality Evaluation on Botanic Gardens and Arboreta in Korea (식물원·수목원 기능성 평가를 통한 개선방안 연구)

  • Kang, Hyun Kyung;Kim, Sun Hae;Kweon, Min-Hoon;Bang, Kwang Ja;Kim, Kwang Doo
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.15 no.3
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    • pp.29-43
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    • 2012
  • This study evaluated 23 botanic gardens and arboretums under two main categories including professional group and operational group. As for professional group, the main difference between the functions of botanic gardens and arboretums was analyzed. In the case of operational group compared professional group respectively, on categories including importance of function and implementation, seeking to provide fundamental data of botanic gardens and arboretums by enhancing the quality of visitors and examining functional differences. The result of a difference in arboretums' function between professional and operational groups, the study analyzed the importance of botanic gardens and arboretums in terms of detailed categories such as research, education, collection, display, retention, and service for visitors. As a result, professional group showed retention 4.32>education 4.11>research 4.09>service for visitors 4.05, and operational group showed retention 3.70>service 3.52>education 3.41>research 3.37, indicating that both groups had retention as the most selected answer. Looking closely at the functions of the currently implemented detailed categories of botanic gardens and arboretums, such as research, education, collection, display, retention, and service for visitors, the study showed that 91.3% selected rare species and individual multiplication for research function, 78.3% chose education of natural ecosystem for children for education, 73.9% answered space for experiencing nature for display, and 73.9% also replied managon, diof rare species, reproduction, and retention of native plants' species for retention category, and service for visitors showed 95.7% for implementation. The study could not clearly point out the influence between predictors due to absence of an established comprehensive evaluation model. Also, it analyzed and reviewed comparison of functions of professional group and operational group, but in the future, it should conduct study on a systemic and objective classification of botanic gardens and arboretums to clearly examine the difference in views between groups, which also requires, at the same time, study on management policy of botanic gardens and arboretums or suggesting guidelines that suit types of forms, and also study on facilities and program development that can be applied to each class.

Distribution of Vascular Plants of Halmibong(Mt.) and Gusibong(Mt.) located in Baekdu trail of Korea (백두대간 할미봉과 구시봉 일대의 관속식물상)

  • Park, Sam-Bong;An, Jong-Bin;Park, Jeong-Geun;Kim, Jin-Jung;Ha, Hyoun-Woo;Kim, Bong-Gyu;Choo, Gab-Chul
    • Korean Journal of Environment and Ecology
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    • v.29 no.6
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    • pp.819-841
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    • 2015
  • To investigate the distribution of vascular plants growing at Halmibong(1,026m) and Gusibong(1,014m) in Baekdutrail, we surveyed from March in 2013 to March in 2014. The flora of Haimibong and Gusibong in Baekdu trail were found to be; 528 taxa; 95 families, 287 genus, 454 species, 4 subspecies, 59 varieties, 11 forma. Rare plants were found to be; 15 taxa, 10 families, 14 genus, 13 species, 2 varieties. Among them EN degree was found to be 1 species(Rhododendron tschonoskii Maxim.), VU degree; 2 species(Scorzonera albicaulis Bunge, Lilium cernuum Kom.), LC degree; 12 species(Abies koreana Wilson, Coreanomecon hylomeconoides Nakai, Viola albida Palib. etc.) respectively. In all surveyed areas, a total of 15 taxa(Heloniopsis koreana Fuse, N.S.Lee & M.N. Tamura etc.) were found to be endemic to Korea. Distribution of floristic special plants in the surveyed areas were found to be divided into five classes (class I~V). The floristic special plants found in surveyed areas were 2 taxa of grade V, 6 taxa of grade IV, 12 taxa of grade III, respectively. The naturalized plants were investigated as 23 taxa; Rumex crispus L., Amorpha fruticosa L., Veronica arvensis L. etc..

Vegetation and Flora of Sagye Coastal Sand Dunes on Jeju Island (제주도 사계 해안사구의 식생과 식물상)

  • Seon-Tak Kang;Hong-Shik Oh
    • Korean Journal of Environment and Ecology
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    • v.38 no.1
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    • pp.1-21
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    • 2024
  • This study conducted surveys to identify the distribution of communities and flora according to vegetation in the coastal sand dunes of Sagye in Jeju Special Self-Governing Province, located at the southernmost tip of Korea. The survey was conducted over 20 sessions from April 2020 to October 2021. As a result of the study, physiognomy was classified into six correlated vegetation types: plant communities on the salt marsh, annual communities on a coastal drift-line, herb communities on a dune, shrub communities on a coastal dune, forest-edge communities on a dune, and artificial afforestation vegetation. The survey identified 43 communities, and a total of 212 taxa were found to be distributed among 62 families, 166 genera, 191 species, 15 varieties, 3 subspecies, and 3 forma. It was found that there were five rare plant taxa distributed in the area, including the Cymbidium macrorrhizum which was classified as an endangered Class II plant by the Ministry of Environment. Floristic target species identified by the surveys included 2 taxa for grade V, 5 taxa for grade IV, 15 taxa for grade III, 14 taxa for grade II, and 19 taxa for grade I. Climate-sensitive biological indicator species included 11 indicator and 2 candidate species, representing a high ratio of 33.3% of all indicator species and 15.4% of candidate species. Naturalized plants included 16 families, 43 genera, and 52 taxa, with a naturalization rate of 21.1% and an urbanization index of 24.5%. It is expected that these results will be widely used as data needed to prepare conservation and management measures for biodiversity in response to climate change in coastal dunes in the future.