• Title/Summary/Keyword: Random selection

Search Result 638, Processing Time 0.024 seconds

Simple Statistical Tools to Detect Signals of Recent Polygenic Selection

  • Piffer, Davide
    • Interdisciplinary Bio Central
    • /
    • v.6 no.1
    • /
    • pp.1.1-1.6
    • /
    • 2014
  • A growing body of evidence shows that most psychological traits are polygenic, that is they involve the action of many genes with small effects. However, the study of selection has disproportionately been on one or a few genes and their associated sweep signals (rapid and large changes in frequency). If our goal is to study the evolution of psychological variables, such as intelligence, we need a model that explains the evolution of phenotypes governed by many common genetic variants. This study illustrates simple statistical tools to detect signals of recent polygenic selection: a) ANOVA can be used to reveal significant deviation from random distribution of allele frequencies across racial groups. b) Principal component analysis can be used as a tool for finding a factor that represents the strength of recent selection on a phenotype and the underlying genetic variation. c) Method of correlated vectors: the correlation between genetic frequencies and the average phenotypes of different populations is computed; then, the resulting correlation coefficients are correlated with the corresponding alleles' genome-wide significance. This provides a measure of how selection acted on genes with higher signal to noise ratio. Another related test is that alleles with large frequency differences between populations should have a higher genome-wide significance value than alleles with small frequency differences. This paper fruitfully employs these tools and shows that common genetic variants exhibit subtle frequency shifts and that these shifts predict phenotypic differences across populations.

Comparison of model selection criteria in graphical LASSO (그래프 LASSO에서 모형선택기준의 비교)

  • Ahn, Hyeongseok;Park, Changyi
    • Journal of the Korean Data and Information Science Society
    • /
    • v.25 no.4
    • /
    • pp.881-891
    • /
    • 2014
  • Graphical models can be used as an intuitive tool for modeling a complex stochastic system with a large number of variables related each other because the conditional independence between random variables can be visualized as a network. Graphical least absolute shrinkage and selection operator (LASSO) is considered to be effective in avoiding overfitting in the estimation of Gaussian graphical models for high dimensional data. In this paper, we consider the model selection problem in graphical LASSO. Particularly, we compare various model selection criteria via simulations and analyze a real financial data set.

The Game Selection Model for the Payoff Strategy Optimization of Mobile CrowdSensing Task

  • Zhao, Guosheng;Liu, Dongmei;Wang, Jian
    • KSII Transactions on Internet and Information Systems (TIIS)
    • /
    • v.15 no.4
    • /
    • pp.1426-1447
    • /
    • 2021
  • The payoff game between task publishers and users in the mobile crowdsensing environment is a hot topic of research. A optimal payoff selection model based on stochastic evolutionary game is proposed. Firstly, the process of payoff optimization selection is modeled as a task publisher-user stochastic evolutionary game model. Secondly, the low-quality data is identified by the data quality evaluation algorithm, which improves the fitness of perceptual task matching target users, so that task publishers and users can obtain the optimal payoff at the current moment. Finally, by solving the stability strategy and analyzing the stability of the model, the optimal payoff strategy is obtained under different intensity of random interference and different initial state. The simulation results show that, in the aspect of data quality evaluation, compared with BP detection method and SVM detection method, the accuracy of anomaly data detection of the proposed model is improved by 8.1% and 0.5% respectively, and the accuracy of data classification is improved by 59.2% and 32.2% respectively. In the aspect of the optimal payoff strategy selection, it is verified that the proposed model can reasonably select the payoff strategy.

Landslide susceptibility assessment using feature selection-based machine learning models

  • Liu, Lei-Lei;Yang, Can;Wang, Xiao-Mi
    • Geomechanics and Engineering
    • /
    • v.25 no.1
    • /
    • pp.1-16
    • /
    • 2021
  • Machine learning models have been widely used for landslide susceptibility assessment (LSA) in recent years. The large number of inputs or conditioning factors for these models, however, can reduce the computation efficiency and increase the difficulty in collecting data. Feature selection is a good tool to address this problem by selecting the most important features among all factors to reduce the size of the input variables. However, two important questions need to be solved: (1) how do feature selection methods affect the performance of machine learning models? and (2) which feature selection method is the most suitable for a given machine learning model? This paper aims to address these two questions by comparing the predictive performance of 13 feature selection-based machine learning (FS-ML) models and 5 ordinary machine learning models on LSA. First, five commonly used machine learning models (i.e., logistic regression, support vector machine, artificial neural network, Gaussian process and random forest) and six typical feature selection methods in the literature are adopted to constitute the proposed models. Then, fifteen conditioning factors are chosen as input variables and 1,017 landslides are used as recorded data. Next, feature selection methods are used to obtain the importance of the conditioning factors to create feature subsets, based on which 13 FS-ML models are constructed. For each of the machine learning models, a best optimized FS-ML model is selected according to the area under curve value. Finally, five optimal FS-ML models are obtained and applied to the LSA of the studied area. The predictive abilities of the FS-ML models on LSA are verified and compared through the receive operating characteristic curve and statistical indicators such as sensitivity, specificity and accuracy. The results showed that different feature selection methods have different effects on the performance of LSA machine learning models. FS-ML models generally outperform the ordinary machine learning models. The best FS-ML model is the recursive feature elimination (RFE) optimized RF, and RFE is an optimal method for feature selection.

Analysis of Unobservable RSS Queueing Systems (관측불가능한 임의순서규칙 대기행렬시스템 분석)

  • Park, Jin-Soo;Kim, Yun-Bae
    • Journal of the Korea Society for Simulation
    • /
    • v.17 no.2
    • /
    • pp.75-82
    • /
    • 2008
  • The times of service commencement and service completion had been used for inferring the queueing systems. However, the service commencement times are difficult to measure because of unobservable nature in queueing systems. In this paper, for inferring queueing systems, the service commencement times are replaced for arrival times which can be easily observed. Determining the service commencement time is very important in our methods. The methods for first come first served(FCFS), last come first served(LCFS) queueing discipline are already developed in our previous work. In this paper, we extend to random selection for service(RSS) queueing discipline. The performance measures we used are mean queueing time and mean service time, the variances of two. The simulation results verify our proposed methods to infer queueing systems under RSS discipline.

  • PDF

A study on helper node selection mechanisms in cooperative communications (협력통신에서 도움노드 선정방법에 대한 비교연구)

  • Jang, Jae-Shin
    • Journal of the Korea Institute of Information and Communication Engineering
    • /
    • v.16 no.7
    • /
    • pp.1397-1405
    • /
    • 2012
  • Cooperative communications play a important role in increasing frame transmission rate at wireless communication networks where frequency resource is strictly limited. In this paper, we did a research on how to select the helper nodes that are very import in cooperative communications. As a prelude study in this research field, we carried out performance comparison of three helper node selection schemes using computer simulation. The system throughput was used as the performance measure and the random way point mobility model, where every communicating nodes move around within the designated communication range, was used.

Identification of the DNA Binding Element of the Human ZNF333 Protein

  • Jing, Zhe;Liu, Yaping;Dong, Min;Hu, Shaoyi;Huang, Shangzhi
    • BMB Reports
    • /
    • v.37 no.6
    • /
    • pp.663-670
    • /
    • 2004
  • ZNF 333 is a new and sole gene containing two KRAB domains which has been identified currently. It is a member of subfamilies of zinc finger gene complex which had been localized on chromosome 19p13.1. The ZNF333 gene mainly encodes a 75.5 kDa protein which contains 10 zinc finger domains. Using the methods of random oligonucleotide selection assay, electromobility gel shift assay and luciferase activity assay, we found that ZNF333 recognized the specific DNA core binding sequence ATAAT. Moreover, these data indicated that the KRAB domain of ZNF333 really has the ability of transcriptional repression.

On The performance of Coordinated Random Beamforming Schemes in A Two-Cell Symmetric Interference Channel (두 셀 대칭적 간섭 채널환경에서 협력적 불규칙 빔형성 방법의 성능에 대한 연구)

  • Yang, Jang-Hoon;Chae, Hyun-Jin;Kim, Yo-Han;Kim, Dong-Ku
    • The Journal of Korean Institute of Communications and Information Sciences
    • /
    • v.36 no.4A
    • /
    • pp.318-324
    • /
    • 2011
  • In this paper, three coordinated random beamforming (CRBF) schemes are analyzed in a two-cell symmetric interference channel. A simple partial coordination of RBF with base station selection (BSS) is shown to achieve the same average sum rate performance of CRBF with joint encoding (JE). To improve the sum rate performance further, we also propose a transmission mode selection (TMS) between the BSS and JE which is shown to have additional sum rate gain for the large number of users. Simulation results verify the eectiveness of the proposed CRBF schemes and accuracy of the proposed analysis.

Adaptive Success Rate-based Sensor Relocation for IoT Applications

  • Kim, Moonseong;Lee, Woochan
    • KSII Transactions on Internet and Information Systems (TIIS)
    • /
    • v.15 no.9
    • /
    • pp.3120-3137
    • /
    • 2021
  • Small-sized IoT wireless sensing devices can be deployed with small aircraft such as drones, and the deployment of mobile IoT devices can be relocated to suit data collection with efficient relocation algorithms. However, the terrain may not be able to predict its shape. Mobile IoT devices suitable for these terrains are hopping devices that can move with jumps. So far, most hopping sensor relocation studies have made the unrealistic assumption that all hopping devices know the overall state of the entire network and each device's current state. Recent work has proposed the most realistic distributed network environment-based relocation algorithms that do not require sharing all information simultaneously. However, since the shortest path-based algorithm performs communication and movement requests with terminals, it is not suitable for an area where the distribution of obstacles is uneven. The proposed scheme applies a simple Monte Carlo method based on relay nodes selection random variables that reflect the obstacle distribution's characteristics to choose the best relay node as reinforcement learning, not specific relay nodes. Using the relay node selection random variable could significantly reduce the generation of additional messages that occur to select the shortest path. This paper's additional contribution is that the world's first distributed environment-based relocation protocol is proposed reflecting real-world physical devices' characteristics through the OMNeT++ simulator. We also reconstruct the three days-long disaster environment, and performance evaluation has been performed by applying the proposed protocol to the simulated real-world environment.

Accurate Wind Speed Prediction Using Effective Markov Transition Matrix and Comparison with Other MCP Models (Effective markov transition matrix를 이용한 풍속예측 및 MCP 모델과 비교)

  • Kang, Minsang;Son, Eunkuk;Lee, Jinjae;Kang, Seungjin
    • New & Renewable Energy
    • /
    • v.18 no.1
    • /
    • pp.17-28
    • /
    • 2022
  • This paper presents an effective Markov transition matrix (EMTM), which will be used to calculate the wind speed at the target site in a wind farm to accurately predict wind energy production. The existing MTS prediction method using a Markov transition matrix (MTM) exhibits a limitation where significant prediction variations are observed owing to random selection errors and its bin width. The proposed method selects the effective states of the MTM and refines its bin width to reduce the error of random selection during a gap filling procedure in MTS. The EMTM reduces the level of variation in the repeated prediction of wind speed by using the coefficient of variations and range of variations. In a case study, MTS exhibited better performance than other MCP models when EMTM was applied to estimate a one-day wind speed, by using mean relative and root mean square errors.