• Animal Bioscience
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• v.34 no.7
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• pp.1105-1115
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• 2021

Objective: To conserve and utilize the genetic resources of a traditional Chinese indigenous pig breed, Liangshan pig, we assessed the genetic diversity, genetic structure, and genetic distance in this study. Methods: We used 50K single nucleotide polymorphism (SNP) chip for SNP detection of 139 individuals in the Liangshan Pig Conservation Farm. Results: The genetically closed conserved population consisted of five overlapping generations, and the total effective content of the population (Ne) was 15. The whole population was divided into five boar families and one non-boar family. Among them, the effective size of each generation subpopulation continuously decreased. However, the proportion of polymorphic markers (P_N) first decreased and then increased. The average genetic distance of these 139 Liangshan pigs was 0.2823±0.0259, and the average genetic distance of the 14 boars was 0.2723±0.0384. Thus, it can be deduced that the genetic distance changed from generation to generation. In the conserved population, 983 runs of homozygosity (ROH) were detected, and the majority of ROH (80%) were within 100 Mb. The inbreeding coefficient calculated based on ROH showed an average value of 0.026 for the whole population. In addition, the inbreeding coefficient of each generation subpopulation initially increased and then decreased. In the pedigree of the whole conserved population, the error rate of paternal information was more than 11.35% while the maternal information was more than 2.13%. Conclusion: This molecular study of the population genetic structure of Liangshan pig showed loss of genetic diversity during the closed cross-generation reproduction process. It is necessary to improve the mating plan or introduce new outside blood to ensure long-term preservation of Liangshan pig.

• Korean Journal of Plant Resources
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• v.26 no.2
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• pp.310-319
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• 2013

The genetic diversity and structure of eight populations of Coreanomecon hylomeconoides Nakai, an endemic Korean plant, were investigated using 50 ISSR loci from eight primers. The average percentage of polymorphic loci was 47.3%. The Shannon's index (SI=0.218) and gene diversity (h=0.142) were relatively lower than those of other long-lived perennials. The Sancheong (SI=0.233, h=0153), Gwangyang (SI=0.263, h=0.171), and Suncheon (SI=0.241, h=0.159) populations showed greater genetic diversity than the Namhae and Gwangju populations, which are on the edge of the distribution. Analysis of molecular variance (AMOVA) showed that 18% of the total variation could be attributed to differences among populations, and 82% to differences within populations, indicating moderate gene flow among adjacent populations. These results were supported by value of Nm (2.184). The UPGMA conducted using the genetic distance and Bayesian cluster analysis showed a remarkable geographic trend structured into east and west regions. Overall, the results indicate that the Sancheong and Gwangyang populations, which had a large population size and higher degree of genetic diversity, should be the focus of in situ conservation.

• Korean Journal of Environmental Biology
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• v.37 no.4
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• pp.508-525
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• 2019

Algific talus slopes provide microclimates suitable for disjunct or relict populations of northern plant species at low elevation habitats in the temperate zones. The propose of this study was to assess the phytogeographical significance and produce a strategy for the comprehensive conservation of the vegetation on algific talus slopes. Therefore, we studied the floristics of bryophytes on 15 algific talus slopes in Korea. The bryophytes on the algific talus slopes in Korea consisted of 59 families, 138 genera, 226 species, two subspecies, and five varieties, totaling 233 taxa. Peculiarly, many northern bryophytes, such as Andreaea rupestris var. fauriei (Besch.) Takaki., Buxbaumia minakatae S. Okamura, Racomitrium lanuginosum (Hedw.) Brid., Hylocomium splendens (Hedw.) Schimp., and Pleurozium schreberi (Willd. ex Brid.) Mitt. were found on the algific talus slopes. Of them, unrecorded species from south Korea numbered 14 taxa and unrecorded species from the Korean peninsula numbered seven taxa. A similarity analysis based on the bryophyte flora showed that the index of similarity between regions with similar environmental factors was high. This means that the bryophyte flora composition on each algific talus slopes was affected by topography and microclimate. Algific talus slopes are phytogeographically significant microhabitats where northern plant species that advanced southward during the latest glacial age have been isolated and adapted. However, algific talus slopes have constantly been destroyed or damaged by humans without consideration of conservation. Conservation strategies to ensure the biodiversity and effective management of algific talus slopes in Korea are discussed in detail.

• Korean Journal of Heritage: History & Science
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• v.48 no.2
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• pp.96-109
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• 2015

The Dresden Elbe Valley of Germany was delisted from the World Heritage List after a long dispute amongst the city of Dresden, UNESCO and the World Heritage Committee upon a plan to build a four-lane bridge within the boundaries of the property. The plan was claimed to threaten the Outstanding Universal Value of the heritage embedded in the view of the river landscape. However looking back on the necessity of the bridge in order to maintain the city dynamics and the needs of the local population, it is possible to diagnose that plans for the bridge had a rather different nature from the usual urban 'development' plans appearing in the vicinity of other World Heritage properties. This article examines the process that led to the delisting of the Elbe Valley from the World Heritage List and assesses the problems arising between the entities which determine the value of the heritage and the entities that implement conservation measures. Recognizing the necessity of involving the local residents, this article stresses the importance of the role of communities in heritage conservation. It is also important to set up dependable directions for establishing conservation policies which takes into account the changing dynamics of the living environment, and sound methods for assessing the impact of future projects on the heritage.

• Korean Journal of Heritage: History & Science
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• v.47 no.4
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• pp.92-105
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• 2014

Microbial characteristics of bacterial population were investigated in human remains and soil inside the bones in excavated grave no.4 and no.5 at Keundokgol site, Osu-ri, Buyeo. Phylogenetic characteristics of bacterial populations were analyzed by direct extracting of ancient DNA. In this study, based on the 16S rDNA sequences, in case of grave no.4, 319s from human remain were classified into 11 phyla, and 462s from soil were classified into 16 phyla. In case of grave no.5, 271s from human remain were classified into 10 phyla, and 497s from soil were classified into 11 phyla. Especially, Actinobacteria phylogenetic group are dominant group of bacterial populations in grave no.4 and no.5. Also, most of these were analyzed uncultured group. Thus, the discovery of a diversely microbial community and uncultured group was thought to be due to the specificity of the sample. Conclusively the general excavated human bones were contaminated with soil bacteria species their near around. This results contribute to preservation and management of ancient human bone from archaeological sites.

• Asian-Australasian Journal of Animal Sciences
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• v.33 no.6
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• pp.888-901
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• 2020

Objective: A set of microsatellite markers with high polymorphism from Tsaiya duck were used for the genetic monitoring and genetic structure analysis of Brown and White Tsaiya duck populations in Taiwan. Methods: The synthetic short tandem repeated probes were used to isolate new microsatellite markers from the genomic DNA of Tsaiya ducks. Eight populations, a total of 566 samples, sourced from Ilan Branch, Livestock Research Institute were genotyped through novel and known markers. The population genetic variables were calculated using optional programs in order to describe and monitor the genetic variability and the genetic structures of these Tsaiya duck populations. Results: In total 24 primer pairs, including 17 novel microsatellite loci from this study and seven previously known loci, were constructed for the detection of genetic variations in duck populations. The average values for the allele number, the effective number of alleles, the observed heterozygosity, the expected heterozygosity, and the polymorphism information content were 11.29, 5.370, 0.591, 0.746, and 0.708, respectively. The results of analysis of molecular variance and principal component analysis indicated a contracting Brown Tsaiya duck cluster and a spreading White Tsaiya duck cluster. The Brown Tsaiya ducks and the White Tsaiya ducks with Pekin ducks were just split to six clusters and three clusters when K was set equal to 6 and 3 in the Bayesian cluster analysis. The individual phylogenetic tree revealed eight taxa, and each individual was assigned to its own population. Conclusion: According to our study, the 24 novel microsatellite markers exhibited a high capacity to analyze relationships of inter- and intra-population in those populations with a relatively limited degree of genetic diversity. We suggest that duck farms in Taiwan could use the new (novel) microsatellite set to monitor the genetic characteristics and structures of their Tsaiya duck populations at various intervals in order to ensure quality breeding and conservation strategies.

• Korean Journal of Plant Taxonomy
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• v.43 no.4
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• pp.245-251
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• 2013

Paeonia lactiflora is a valuable natural resource for horticulture and traditional Chinese medicine. To propose conservation strategy and future utility of the wild Paeonia lactiflora populations recently found around the Gyeongju National Park, genetic diversity analysis using microsatellite markers were performed. Three populations in and near the Gyeongju N.P. and one population from Jilin, China were analyzed for five microsatellite markers, producing 61 alleles with mean observed heterozygosity($H_o$) of 0.452. $F_{ST}$ value (0.11642) suggested moderate level of genetic differentiation among the populations, and hierarchical AMOVA suggested most of the genetic variation resides within/among the individuals rather than among-population. While AMOVA with $F_{ST}$ suggested lack of genetic differentiation between the regional (Korean vs. Chinese) populations, AMOVA with $R_{ST}$, which incorporates the allele sizes, suggested considerable differentiation between them, but without significant statistical support. STRUCTURE analysis also suggested segregation of regional populations with presence of gene flow among the three Gyeongju N.P. populations. Considering small population size and scarcity of mature individuals, further protection and long-term monitoring are needed.

• Korean Journal of Plant Taxonomy
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• v.43 no.3
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• pp.181-187
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• 2013

Genetic variation in Asaum misandrum, a woodland herb in Korea, was investigated based on allozyme analysis with starch gel electrophoresis. All of previously reported populations in Korea were sampled and seven loci from six enzymes were analyzed. Overall genetic variation of A. misandrum population showed considerably high levels of genetic variation within the species (A = 2.05, P = 71.4, $H_E$ = 0.294). A positive $F_{IS}$ value of A. misandrum indicated overall deficiency of heterozygotes, and a low $F_{ST}$ value (0.112) meant very little differentiation among populations. Factors contributing to the high levels of genetic diversity found within populations of A. misandrum include population maintenance via wide distribution range from Korea to Japan and primarily outcrossing breeding system. Although it showed moderate genetic diversity level, most habitats of the species were scattered and discontinuous. Besides, low numbers of individuals were found in the most habitats and individuals are collected frequently from the wild due to the unique shape of the flowers as well as the rarity of the species. Thus, there is a need to set up a reasonable conservation strategies including the maintenance mechanism of genetic diversity of A. misandrum.

• Journal of Forest and Environmental Science
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• v.33 no.1
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• pp.8-21
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• 2017

The objective of this study is to identify the individual characteristics and the elements of social capital hence a suitable design of social capital reinforcement can be proposed to promote a sustainable community-based mangrove management. The research conducted in three villages that were selected based on mangrove ecological differences in Lampung Province, Indonesia. Qualitative data was collected through field observation and in-depth interviews with key informants. The results showed that the population in the three villages dominated on productive ages, worked as farmers, and less educated (only a half of the population had fulfilled the basic education standard of Indonesia). The study results also indicated that the social capital in the communities showed minimum condition of interpersonal attachment and cooperation. This condition was derived from the attitude of the people who only took personal benefit without concerning to others' welfare. Many programs conducted by government to ensure the conservation of mangroves were project-oriented with minor participation of community. The minor participation might also contributed to the minimum of social capital in the community. To improve social capital, the communities should strengthen mutual trust based on mutual benefit to increase members' participation in mangrove activity.

• Ocean and Polar Research
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• v.31 no.3
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• pp.277-282
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• 2009

Saunders' gulls (Laurs saundersi) which are listed as globally vulnerable species on the IUCN Red List are distributed in East Asia and breed mainly in China and Korea. Their population is estimated to be between 7,100 to 9,600. Songdo reclaimed lands in the western coast of South Korea are the main breeding sites for these species. However, most of these breeding sites have been seriously disturbed in the last several years because of new urban development constructions. This study was conducted to provide baseline data on the breeding ecology of Saunders' gulls. Since 1998, the breeding population has rapidly increased in South Korea, with the number of nests rising from 85 nests in 2000 to 185 nests in 2005. Egg volume is more variable than breadth or length. Clutch size, hatching and breeding success were $2.9{\pm}0.81$ (n=182, mean$\pm$sd.), 48.07% (75 hatched egg/156 eggs) and 29.08% (155 fledglings/533 eggs), respectively. Factors affecting breeding failure were predation, rainfall, starvation and supernormal clutches. These results are provided along with other cited literature to argue for conservation of Saunders' gulls.