• Title/Summary/Keyword: PepA

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Policy Definition Language for Service Management in Mobile Environment (모바일 서비스관리를 위한 정책정의언어)

  • Ahn, Sung-Wook;Rhew, Yul-Sung
    • The KIPS Transactions:PartD
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    • v.16D no.4
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    • pp.561-570
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    • 2009
  • In order to manage repair and maintenance efficiently in the mobile environment, the system structure to manage service as a policy and the policy description language are needed. This research defined the structure of PEP, which is the executioner of policy in the IETF policy framework, and proposed the policy description language which can be carried out under the PEP structure. The proposed policy description language derived demand matters based on documentary data and the characteristics of mobile and the policy information model was designed with the three stage approaches and was defined as policy description language. The three stage approaches are made up of the policy domain that decides the scope to which the policy applies, the policy rules which distinguish the kinds of policy application and control, and policy grammar which contextualizes the policy structure. In order to verify the efficiency of the policy description language, scenarios are defined with the policy description language and verified it by using policy tool and proved the expansive nature by comparing and analyzing other policy description language.

Memory-improving Effects of Fermented Sea Tangle Saccharina japonica in Normal Mice (정상 동물모델에서 다시마(Saccharina japonica) 발효물의 기억력 개선 효과)

  • Ryu, Jehkwang;Jo, Young-Hong;Chang, Seong-Jun;Lee, Bae-Jin
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.49 no.2
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    • pp.131-136
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    • 2016
  • Marine organisms are sources of many bioactive compounds, such as essential fatty acids, essential amino acids, vitamins, and minerals, making them useful candidates for the production of safe bioactive substances. They also synthesize glutamic acid, which can be used to produce γ-aminobutyric acid (GABA), the major inhibitory neurotransmitter in the central nervous system (CNS), via fermentation with Lactobacillus brevis BJ-20. This study investigated the degree to which fermented sea tangle (FST) inhibits enzymes such as acetylcholine esterase (AChE) and prolyl endopeptidase (PEP) and affects memory of normal mice using the T-maze test. FST inhibited more than 90% of AChE at 1 mg/mL and 50% of PEP at 8 mg/mL. Oral FST (100 mg/kg) significantly improved performance of normal mice on the T-maze. Therefore, sea tangle fermented with L. brevis BJ20 effectively contributes to memory improvement and might be a useful functional food ingredient.

Active PDP Discovery for PBNM in MANETs (MANETs에서 정책기반 망 관리를 위한 Active PDP Discovery)

  • Lee Kyung-Jin;Song Wang-Cheol
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.31 no.5B
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    • pp.390-396
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    • 2006
  • Policy-based Network Management(PBNM) in the Mobile Ad-hoc network(MANETs) requires additional, reliable and efficient mechanism over PBNM in wired network. Thus, it is important that the management system in MANETs should cluster the moving nodes and manage their movements in an effective manner. In this thesis, I propose a mechanism for the policy-based management in ad hoc networks in which I consider several methods to discover the Policy Decision Point(PDP), set the management area, and manage the movements of Policy Enforcement Point(PEP) nodes in the PBNM system. Moreover, COPS-PR is extended for the mechanism. Finally, I analyze and validate the results through simulations.

Incidence and Occurrence Pattern of Viruses on Peppers Growing in Fields in Korea (국내 노지재배 고추의 바이러스 발생률 및 발병 현황)

  • Kwon, Sun-Jung;Cho, In-Sook;Yoon, Ju-Yeon;Chung, Bong-Nam
    • Research in Plant Disease
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    • v.24 no.1
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    • pp.66-74
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    • 2018
  • Field surveys to investigate the incidence and occurrence pattern of viruses in red pepper were conducted during 2015-2016 in Korea. A total of 424 samples in 2015 and 368 samples in 2016 were collected based on selection of plants showing symptoms from farmer's field from every June to September. Reverse transcription-Polymerase chain reaction was used to test all samples for the presence of one or more of following viruses: Cucumber mosaic virus (CMV), Broad bean wilt virus 2 (BBWV2), Tomato spotted wilt virus (TSWV), Beet western yellows virus (BWYV), Pepper mottle virus (PepMoV), Potato virus Y (PVY) and Pepper mild mottle virus (PMMoV). The average disease incidence was 91.7% in 2015 and 98% in 2016 and the all seven viruses were found although there were different kinds of regions. The percent virus incidence in collected samples during 2015 was as follows: CMV, 73.8%; BBWV2, 68.3%; BWYV, 46.9%; PMMoV, 14.6%; TSWV, 12.7%; PepMoV, 6.6% and PVY, 3.3%. For 2016, incidence was as follows: CMV, 73.3%; BBWV2, 71.4%; BWYV, 34.7%; TSWV, 27.9%, PMMoV, 19.2%; PepMoV, 13.5% and PVY, 3.5%. Mixed infections were prevalent over single infections and infection rate was 83% and 86.7% in 2015 and 2016, respectively.

Occurrence of Viral Diseases in Field-Cultivated Pepper in Korea from 2006 to 2010 (2006~2010년도 국내 노지재배 고추의 바이러스병 발생현황)

  • Lee, Jang Ha;Hong, Jin Sung;Ju, Ho-Jong;Park, Duck Hwan
    • Korean Journal of Organic Agriculture
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    • v.23 no.1
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    • pp.123-131
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    • 2015
  • In this study, viral disease samples were obtained between 2006 and 2010 from pepper fields in 11 major pepper-growing districts in Gangwon-do, and in 83 areas from other provinces, with the exception of Gyeongsangnam-do and Jeju island in Korea. In order to assess the type of infection, field surveys were conducted with regard to viral disease severity and virus type, based on typical symptoms on leaves. The means of single and mixed-virus infections were 46.6% and 48.0%, respectively, during those periods, suggesting that viruses are the agents that most severely decrease pepper production in field cultivation in Korea. In terms of single infection, Cucumber mosaic virus (CMV) was the most prevalent virus based on its disease severity ratings (34.8%). Next, Pepper mild mottle virus (PMMoV) and Pepper mottle virus (PepMoV) were shown to cause severe viral diseases in pepper, with disease severities of around 5-10%. On the other hand, Tomato spotted wilt virus (TSWV) occurs in a limited area in Chungcheongnam-do and Jeollanam-do. Thus, the viral disease caused by CMV, PMMoV, and PepMoV in pepper can be severe, and these virus types should remain considered critical reasons for decreased pepper production in field cultivation in Korea. In addition to single infection, mixed infections are frequently observed in collected pepper samples from all areas. The ratios of mixed infection were therefore studied to evaluate the disease severity of mixed infections and to define individual virus types. These data showed that different types of viruses were present, and CMV was the most abundant virus for mixed infection, as in the case of single infection. Among mixed infections, the highest disease severity was seen with CMV+Broad beam wilt virus 2 (BBWV2), followed by other types of mixed infection such as CMV+PepMoV and CMV+PMMoV. However, further work is needed to reduce the severe damage caused by viruses and to assess mixed infection types involving three or more viruses.

Kinetic Properties of Wild-type and C117D Mutant UDP-N-Acetylglucosamine Enolpyruvyl Transferase (MurA) from Haemophilus influenzae

  • Han, Seong-Gu;Jin, Bong-Suk;Lee, Won-Kyu;Yu, Yeon-Gyu
    • Bulletin of the Korean Chemical Society
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    • v.32 no.8
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    • pp.2549-2552
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    • 2011
  • In this study, the kinetic properties of wild-type and C117D mutant H. influenzae MurA (Hi MurA), which catalyzes the first reaction in the biosynthetic pathway of the cell wall, were characterized. Purified recombinant Hi MurA was active at pH values ranging from pH 5.5 to pH 10, and its $K_m$ (UNAG), $K_m$ (PEP), and $k_{cat}$ values were measured to be 31 ${\mu}M$, 24 ${\mu}M$, and 210 $min^{-1}$, respectively. Hi MurA activity was effectively inhibited by fosfomycin with an $IC_{50}$ value of 60 ${\mu}M$. Hi MurA contains a cysteine residue (C117) at the loop region near the PEP binding, whereas MurA from fosfomycin resistant Mycobaterium tuberculosis or Chlamydia trachomatis contain an aspartate residue instead of the cysteine at the corresponding site. Aspartate substitution of Cys117 in Hi MurA shifted its optimum pH from 7.8 to 6.0. In addition, the $K_m$ values for UNAG and PEP were increased to 160 ${\mu}M$ and 150 ${\mu}M$, respectively, and the $k_{cat}$ value was significantly reduced to 41 $min^{-1}$. Furthermore, the C117D mutant form of Hi MurA was not inhibited by 1 mM fosfomycin. These results indicate that the Cys117 of Hi MurA is the binding site of fosfomycin and plays an important role in the fast turnover of the catalytic reaction.

Construction of a Novel Shuttle Vector for Tetragenococcus species based on a Cryptic Plasmid from Tetragenococcus halophilus

  • Min Jae Kim;Tae Jin Kim;Yun Ji Kang;Ji Yeon Yoo;Jeong Hwan Kim
    • Journal of Microbiology and Biotechnology
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    • v.33 no.2
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    • pp.211-218
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    • 2023
  • A cryptic plasmid (pTH32) was characterized from Tetragenococcus halophilus 32, an isolate from jeotgal, Korean traditional fermented seafood. pTH32 is 3,198 bp in size with G+C content of 35.84%, and contains 4 open reading frames (ORFs). orf1 and orf2 are 456 bp and 273 bp in size, respectively, and their translation products showed 65.16% and 69.35% similarities with RepB family plasmid replication initiators, respectively, suggesting the rolling-circle replication (RCR) mode of pTH32. orf3 and orf4 encodes putative hypothetical protein of 186 and 76 amino acids, respectively. A novel Tetragenococcus-Escherichia coli shuttle vector, pMJ32E (7.3 kb, Emr), was constructed by ligation of pTH32 with pBluescript II KS(+) and an erythromycin resistance gene (ErmC). pMJ32E successfully replicated in Enterococcus faecalis 29212 and T. halophilus 31 but not in other LAB species. A pepA gene, encoding aminopeptidase A (PepA) from T. halophilus CY54, was successfully expressed in T. halophilus 31 using pMJ32E. The transformant (TF) showed higher PepA activity (49.8 U/mg protein) than T. halophilus 31 cell (control). When T. halophilus 31 TF was subculturd in MRS broth without antibiotic at 48 h intervals, 53.8% of cells retained pMJ32E after 96 h, and only 2.4% of cells retained pMJ32E after 14 days, supporting the RCR mode of pTH32. pMJ32E could be useful for the genetic engineering of Tetragenococcus and Enterococcus species.

Analysis of Genetic Diversity of Phytophthora infestans in Korea by Using Molecular Markers

  • Zhang Xuan-Zhe;Kim Hwa-Yeong;Kim Byung-Sup
    • Journal of Microbiology and Biotechnology
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    • v.16 no.3
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    • pp.423-430
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    • 2006
  • A total of 367 isolates of Phytophthora infestans was collected from the leaf samples of late blight disease from five provinces in Korea over the three growing seasons of 2002-2004. Of the 367 isolates, 337 isolates were of the A1 mating type, and 30 isolates were of A2 mating type, showing that the majority was A1 mating type. Profiles of Gpi and Pep defined four allozyme genotypes among the total of 367 isolates. All four allozyme genotypes could be distinguished on the basis of Gpi profiles alone, whereas all isolates were homozygous at the Pep locus (100/100). The mitochondrial DNA haplotype of all isolates were the IIa haplotype. Amplification of the genomic DNAs extracted from eight isolates of each mating type by polymerase chain reaction with the selected primer (OPC-5 primer) produced a total of 20 DNA bands, of which 11 bands were polymorphic. According to the RAPD analysis using the OPC-5 primer, 106 isolates including two standard isolates were separated into 8 groups at the similarity level of 92.5%. The RAPD groups were not correlated with the allozyme genotypes and the isolated locations. All of the eight RAPD groups were identified in Gangwon-do, suggesting that Gangwon-do is the center of origin of the P. infestans in Korea. A 600-bp DNA band generated with the OPC-5 primer was specific to A1 mating type isolates, but not detected with A2 mating type, showing that the specific PCR primer can distinguish different mating types in P. infestans.

N-Terminal Sequence of Soybean $\beta$- Amylase (대두 $\beta$- Amylase의 N-말단 아미노산 배열)

  • Ji, Ui-Sang;Kim, Gwan-Muk;Kim, Jun-Pyeong
    • The Korean Journal of Food And Nutrition
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    • v.4 no.2
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    • pp.161-166
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    • 1991
  • The blocked N-terminus and N-terminal sequence of soybean B-amylase were aetermined by analyzing the acidic peptides derived on peptic digestion of the enzyme. The acidic peptides were separated from the digest on a Dowex 50$\times$2 column(1X5cm) and purified by reversed phase-high performance liquid chromatography(RP-HPLC). The major acidic peptide, PEP-1, was a heptapeptlde. The N-terminal 7 amino acid sequence of soybean B-amylase was deduced to be acetyl-Ala-Thf-Ser-Asp-Ser-Asn-Met- from the results of sequence analysis of PEP-1 and amino acid analysis of other acidic peptides.

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Safety and feasibility of opening window fistulotomy as a new precutting technique for primary biliary access in endoscopic retrograde cholangiopancreatography

  • Yasuhiro Kuraishi;Kazuo Hara;Shin Haba;Takamichi Kuwahara;Nozomi Okuno;Takafumi Yanaidani;Sho Ishikawa;Tsukasa Yasuda;Masanori Yamada;Nobumasa Mizuno
    • Clinical Endoscopy
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    • v.56 no.4
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    • pp.490-498
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    • 2023
  • Background/Aims: Post-endoscopic retrograde cholangiopancreatography pancreatitis (PEP) is the most common and serious complication of endoscopic retrograde cholangiopancreatography. To prevent this event, a unique precutting method, termed opening window fistulotomy, was performed in patients with a large infundibulum as the primary procedure for biliary cannulation, whereby a suprapapillary laid-down H-shaped incision was made without touching the orifice. This study aimed to assess the safety and feasibility of this novel technique. Methods: One hundred and ten patients were prospectively enrolled in this study. Patients with a papillary roof size ≥10 mm underwent opening window fistulotomy for primary biliary access. In addition, the incidence of complications and success rate of biliary cannulation were evaluated. Results: The median size of the papillary roof was 6 mm (range, 3-20 mm). Opening window fistulotomy was performed in 30 patients (27.3%), none of whom displayed PEP. Duodenal perforation was recorded in one patient (3.3%), which was resolved by conservative treatment. The cannulation rate was high (96.7%, 29/30 patients). The median duration of biliary access was 8 minutes (range, 3-15 minutes). Conclusions: Opening window fistulotomy demonstrated its feasibility for primary biliary access by achieving great safety with no PEP complications and a high success rate for biliary cannulation.