• Title/Summary/Keyword: POLAR

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Screening for Cold-Active Protease-Producing Bacteria from the Culture Collection of Polar Microorganisms and Characterization of Proteolytic Activities (남북극 유래 저온성 박테리아 Culture Collection에서 저온활성 프로테아제 생산균주의 스크리닝과 효소 특성)

  • Kim, Doc-Kyu;Park, Ha-Ju;Lee, Yung-Mi;Hong, Soon-Gyu;Lee, Hong-Kum;Yim, Joung-Han
    • Korean Journal of Microbiology
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    • v.46 no.1
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    • pp.73-79
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    • 2010
  • The Korea Polar Research Institute (KOPRI) has assembled a culture collection of cold-adapted bacterial strains from both the Arctic and Antarctic. To identify excellent protease-producers among the proteolytic bacterial collection (874 strains), 78 strains were selected in advance according to their relative activities and were subsequently re-examined for their extracellular protease activity on $0.1{\times}$ ZoBell plates supplemented with 1% skim milk at various temperatures. This rapid and direct screening method permitted the selection of a small group of 15 cold-adapted bacterial strains, belonging to either the genus Pseudoalteromonas (13 strains) or Flavobacterium (2 strains), that showed proteolytic activities at temperatures ranging between $5-15^{\circ}C$. The cold-active proteases from these strains were classified into four categories (serine protease, aspartic protease, cysteine protease, and metalloprotease) according to the extent of enzymatic inhibition by a class-specific protease inhibitor. Since highly active and/or cold-adapted proteases have the potential for industrial or commercial enzyme development, the protease-producing bacteria selected in this work will be studied as a valuable natural source of new proteases. Our results also highlight the relevance of the Antarctic for the isolation of protease-producing bacteria active at low temperatures.

Morphology and phylogenetic relationships of Micractinium (Chlorellaceae, Trebouxiophyceae) taxa, including three new species from Antarctica

  • Chae, Hyunsik;Lim, Sooyeon;Kim, Han Soon;Choi, Han-Gu;Kim, Ji Hee
    • ALGAE
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    • v.34 no.4
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    • pp.267-275
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    • 2019
  • Three new species of the genus Micractinium were collected from five localities on the South Shetland Islands in maritime Antarctica, and their morphological and molecular characteristics were investigated. The vegetative cells are spherical to ellipsoidal and a single chloroplast is parietal with a pyrenoid. Because of their simple morphology, no conspicuous morphological characters of new species were recognized under light microscopy. However, molecular phylogenetic relationships were inferred from the concatenated small subunit rDNA, and internal transcribed spacer (ITS) sequence data indicated that the Antarctic microalgal strains are strongly allied to the well-supported genus Micractinium, including M. pusillum, the type species of the genus, and three other species in the genus. The secondary structure of ITS2 and compensatory base changes were used to identify and describe six Antarctic Micractinium strains. Based on their morphological and molecular characteristics, we characterized three new species of Micractinium: M. simplicissimum sp. nov., M. singularis sp. nov., and M. variabile sp. nov.

Polar rain flux variations in northern hemisphere observed by STSAT_1 with IMF geometry

  • Hong, Jin-Hy;Lee, J.J.;Min, K.W.;Kim, K.H.
    • Bulletin of the Korean Space Science Society
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    • 2008.10a
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    • pp.25.2-25.2
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    • 2008
  • Polar rain is a spatially uniform precipitation of electrons with energies around 100eV that penetrate into the polar cap region where geomagnetic field lines are connected to the Interplanetary Magnetic Fields (IMF). Since their occurrences depend on the IMF sector polarity, they are believed to originate from the field aligned component of the solar wind. However, statistically direct correlation between polar rain and solar wind has not been shown. In this presentation, we examined specifically the IMF strength influence on the polar rain flux variation by classifying of IMF sector polarities. For this study, we employed the polar rain flux data measured by STSAT-1 and compared them with the solar wind parameters obtained from the WIND and ACE satellites. We found the direct mutuality between polar rain flux and IMF strength with correlation coefficient above 0.5. This proportional tendency appears stronger when the northern hemisphere is in the away sector of the IMF, which could be associated with a favorable geometry for magnetic reconnection. Simple particle trajectory simulation clearly shows why polar rain intensity depends on the IMF sector polarity. These results are consistent with the direct entry model of Fairfield et al.(1985), while low correlation coefficient with solar wind density, the similarity between slops of both energy spectra shows that transport process occur without acceleration.

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Enhancement of the Stability and Solubility of Prodigiosin Using β-Cyclodextrin in Seawater (β-Cyclodextrin을 이용한 해수에서의 Prodigiosin의 안정성과 용해도 향상)

  • Park, Hee-Yong;Kim, Tai-Kyoung;Han, Se-Jong;Yim, Joung-Han
    • KSBB Journal
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    • v.27 no.2
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    • pp.109-113
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    • 2012
  • This research was to examine the effects of various cyclodextrins on the solubility and stability of prodigiosin in seawater. Among them, ${\beta}$-cyclodextrin was found to have the best efficiency and formation of the inclusion complex was saturated when prodigiosin and ${\beta}$-cyclodextrin were mixed in a ratio of 1:8 and shaken at $25^{\circ}C$ and pH 8.0 for 6 h. The maximum algicidal activity against Chattonella antiqua using the inclusion complex stored at $4^{\circ}C$ for 5 weeks of culture was obtained, $52.28{\pm}3.41%$, which was about 5.0 fold higher than that of control. Our results suggest that inclusion complexes of prodigiosin and ${\beta}$-cyclodextrin could serve as effective algicidal agents.

Morphology and Molecular Data for Antarctic Cryophilic Microalga, Porosira pseudodenticulata (남극 호냉성 미세조 Porosira pseudodenticulata의 형태와 분자적 자료)

  • Jung, Woong-Sic;Joo, Hyoung-Min;Hong, Sung-Soo;Kang, Jae-Shin;Choi, Han-Gu;Kang, Sung-Ho
    • ALGAE
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    • v.21 no.2
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    • pp.169-174
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    • 2006
  • We have cultured more than 100 Arctic and Antarctic cryophilic microalgal strains in KOPRI culture collections of polar microorganisms (KCCPM). Among them, we tried to identify an Antarctic strain, KOPRI AnM0008 by morphological and molecular analysis. Nuclear SSU rDNA and plastid rbcL sequences were used to identify the strain. It was identified as Porosira pseudodenticulata based on SSU sequence data showing 99% identity with GenBank X85398. This result was supported by morphological features like solitary labiate process, external foramina and internal cribra by optical and scanning electron microscope. Morphological identification and molecular analysis on polar cryophilic microalgae will be accomplished to construct the databases for KCCPM.

Characterization of Heterogeneous Interaction Behaviour in Ternary Mixtures by Dielectric Analysis: The H-Bonded Binary Polar Mixture in Non-Polar Solvent

  • Sengwa, R.J.;Madhvi;Sankhla, Sonu;Sharma, Shobha
    • Bulletin of the Korean Chemical Society
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    • v.27 no.5
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    • pp.718-724
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    • 2006
  • The heterogeneous association behaviour of various concentration binary mixtures of mono alkyl ethers of ethylene glycol with ethyl alcohol were investigated by dielectric measurement in benzene solutions over the entire concentration range at 25 ${^{\circ}C}$. The values of static dielectric constant $\epsilon_0$ of the mixtures were measured at 1 MHz using a four terminal dielectric liquid test fixture and precision LCR meter. The high frequency limiting dielectric constant $\epsilon_\infty$ values were determined by measurement of refractive index $n_D$ ($\epsilon_\infty\;=\;n_D\;^2$). The measured values of $\epsilon_0$ and $\epsilon_\infty$ were used to evaluate the values of excess dielectric constant $\epsilon^E$, effective Kirkwood correlation factor $g^{eff}$ and corrective correlation factor $g_f$ of the binary polar mixtures to obtain qualitative and quantitative information about the H-bond complex formation. The non-linear behaviour of the observed $\epsilon_0$ values of the polar molecules and their mixtures in benzene solvent confirms the variation in the associated structures with change in polar mixture constituents concentration and also by dilution in non-polar solvents. Appearance of the maximum in $\epsilon^E$ values at different concentration of the polar mixtures suggest the formation of stable adduct complex, which depends on the molecular size of the mono alkyl ethers of ethylene glycol. Further, the observed $\epsilon^E$ < 0 also confirms the heterogeneous H-bond complex formation reduces the effective number of dipoles in these polar binary mixtures. In benzene solutions these polar molecules shows the maximum reduce in effective number of dipoles at 50 percent dilutions. But ethyl alcohol rich binary polar mixtures in benzene solvent show the maximum reduce in effective number of dipoles in benzene rich solutions.

Different Developmental Competence of Porcine Oocytes Selected by Brilliant Cresyl Blue Staining and Polar Body Extrusion (Brilliant Cresyl Blue 염색방법과 극체 방출 여부에 따른 돼지 체외수정용 난포란 선별 방법이 배발달에 미치는 영향)

  • Kim, Yeon-Soo;Kim, Cheol-Wook;Kim, In-Cheol;Kwack, Dae-O;Chung, Ki-Hwa
    • Reproductive and Developmental Biology
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    • v.33 no.1
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    • pp.29-33
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    • 2009
  • The brilliant cresyl blue (BCB) has been used to select the developmental competent oocytes in pigs, goats and cows. Growing oocytes have a higher level of active glucose-6-phosphate dehydrogenase(G6PDH) compare to mature oocytes and are rarely stained compared to mature oocytes, because G6PDH converts BCB to colorless. First polar body extrusion regard as a guideline of meoisis completion. Selection of polar body extrude oocyte is more developmental competent to blastocyst than unselected. This study was conducted to compare the BCB test to the polar body extrusion on selection of developmental competent porcine oocytes for the production of blastocyst. Cumulus-Oocytes complex were exposed to 26uM BCB stain diluted in NCSU-23 for 90 min. There was no significant difference embryo development to blastocysts between BCB treated and not treated($19.58{\pm}1.99$ vs $18.75{\pm}2.27%$), which means there was no detrimental effect of BCB exposure to oocytes. Normal fertilization is not differed among treatment groups from 70.0 to 78.4% development to blastocyst, beside polyspermy did not. To compare two different selection methods, BCB test and polar body extrusion, evaluate the developmental competent of IVP embryos. BCB+PB+(blue stained and polar body extruded, $20.71{\pm}0.45%$) and BCB-PB+(colorless and polar body extruded, $20.04{\pm}l.29%$) groups are significantly (p<0.05) higher developed than those of BCB+PB-(blue stained and no polar body, $13.24{\pm}0.73%$) and BCB-PB-(colorless and no poladbody, $7.25{\pm}0.77%$). These results showed that selection of polar body extruded oocytes method is more efficient than that of BCB test.

Ground-based Observations of the Polar Region Space Environment at the Jang Bogo Station, Antarctica

  • Kwon, Hyuck-Jin;Lee, Changsup;Jee, Geonhwa;Ham, Young-Bae;Kim, Jeong-Han;Kim, Yong Ha;Kim, Khan-Hyuk;Wu, Qian;Bullett, Terence;Oh, Suyeon;Kwak, Young-Sil
    • Journal of Astronomy and Space Sciences
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    • v.35 no.3
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    • pp.185-193
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    • 2018
  • Jang Bogo Station (JBS), the second Korean Antarctic research station, was established in Terra Nova Bay, Antarctica ($74.62^{\circ}S$ $164.22^{\circ}E$) in February 2014 in order to expand the Korea Polar Research Institute (KOPRI) research capabilities. One of the main research areas at JBS is space environmental research. The goal of the research is to better understand the general characteristics of the polar region ionosphere and thermosphere and their responses to solar wind and the magnetosphere. Ground-based observations at JBS for upper atmospheric wind and temperature measurements using the Fabry-Perot Interferometer (FPI) began in March 2014. Ionospheric radar (VIPIR) measurements have been collected since 2015 to monitor the state of the polar ionosphere for electron density height profiles, horizontal density gradients, and ion drifts. To investigate the magnetosphere and geomagnetic field variations, a search-coil magnetometer and vector magnetometer were installed in 2017 and 2018, respectively. Since JBS is positioned in an ideal location for auroral observations, we installed an auroral all-sky imager with a color sensor in January 2018 to study substorms as well as auroras. In addition to these observations, we are also operating a proton auroral imager, airglow imager, global positioning system total electron content (GPS TEC)/scintillation monitor, and neutron monitor in collaboration with other institutes. In this article, we briefly introduce the observational activities performed at JBS and the preliminary results of these observations.

Performance of Successive-Cancellation List Decoding of Extended-Minimum Distance Polar Codes (최소거리가 확장된 극 부호의 연속 제거 리스트 복호 성능)

  • Ryu, Daehyeon;Kim, Jae Yoel;Kim, Jong-Hwan;Kim, Sang-Hyo
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.38C no.1
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    • pp.109-117
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    • 2013
  • Polar codes are the first provable error correcting code achieving the symmetric channel capacity in a wide case of binary input discrete memoryless channel(BI-DMC). However, finite length polar codes have an error floor problem with successive-cancellation list(SCL) decoder. From previous works, we can solve this problem by concatenating CRC(Cyclic Redundancy Check) codes. In this paper we propose to make polar codes having extended-minimum distance from original polar codes without outer codes using correlation with generate matrix of polar codes and that of RM(Reed-Muller) codes. And we compare performance of proposed polar codes with that of polar codes concatenating CRC codes.