Morphology and phylogenetic relationships of Micractinium (Chlorellaceae, Trebouxiophyceae) taxa, including three new species from Antarctica |
Chae, Hyunsik
(Division of Polar Life Sciences, Korea Polar Research Institute)
Lim, Sooyeon (Division of Polar Life Sciences, Korea Polar Research Institute) Kim, Han Soon (School of Life Sciences, Kyungpook National University) Choi, Han-Gu (Division of Polar Life Sciences, Korea Polar Research Institute) Kim, Ji Hee (Division of Polar Life Sciences, Korea Polar Research Institute) |
1 | Hoshina, R., Iwataki, M. & Imamura, N. 2010. Chlorella variabilis and Micractinium reisseri sp. nov. (Chlorellaceae, Trebouxiophyceae): redescription of the endosymbiotic green algae of Paramecium bursaria (Peniculia, Oligohymenophorea) in the 120th year. Phycol. Res. 58:188-201. DOI |
2 | Kim, Y. G. & Kim, H. S. 2012. Algal flora of Korea. Vol. 6, No. 2. Freshwater green algae: Chlorophyta: Chlorophyceae:Chlorococcales I: Micractiniaceae, Botryococcaceae, Characiaceae, Hydrodictyaceae. National Institute of Biological Resources, Incheon, 117 pp. |
3 | Korshikov, A. A. 1953. The freshwater algae of the Ukrainian SSR. Vol. 5. Sub-class Protococcineae. Vacuolales and Protococcales. Akademii Nauk URSR, Kiev, pp. 1-439. |
4 | Krienitz, L., Bock, C., Luo, W. & Proschold, T. 2010. Polyphyletic origin of the Dictyosphaerium morphotype within Chlorellaceae (Trebouxiophyceae). J. Phycol. 46:559-563. DOI |
5 | Krienitz, L., Hegewald, E. H., Hepperle, D., Huss, V. A. R., Rohr, T. & Wolf, M. 2004. Phylogenetic relationship of Chlorella and Parachlorella gen. nov. (Chlorophyta, Trebouxiophyceae). Phycologia 43:529-542. DOI |
6 | Llames, M. E. & Vinocur, A. 2007. Phytoplankton structure and dynamics in a volcanic lake in Deception Island (South Shetland Islands, Antarctica). Polar Biol. 30:849-857. DOI |
7 | Luo, W., Krienitz, L., Pflugmacher, S. & Walz, N. 2005. Genus and species concept in Chlorella and Micractinium (Chlorophyta, Chlorellaceae): genotype versus phenotypical variability under ecosystem conditions. Verh. Int. Ver. Limnol. 29:170-173. |
8 | Luo, W., Pflugmacher, S., Proschold, T., Walz, N. & Krienitz, L. 2006. Genotype versus phenotype variability in Chlorella and Micractinium (Chlorophyta, Trebouxiophyceae). Protist 157:315-333. DOI |
9 | Muller, J., Friedl, T., Hepperle, D., Lorenz, M. & Day, J. G. 2005. Distinction between multiple isolates of Chlorella vulgaris (Chlorophyta, Trebouxiophyceae) and testing for conspecificity using amplified fragment length polymorphism and ITS rDNA sequences. J. Phycol. 41:1236-1247. DOI |
10 | Mai, J. C. & Coleman, A. W. 1997. The internal transcribed spacer 2 exhibits a common secondary structure in green algae and flowering plants. J. Mol. Evol. 44:258-271. DOI |
11 | Muller, T., Philippi, N., Dandekar, T., Schultz, J. & Wolf, M. 2007. Distinguishing species. RNA 13:1469-1472. DOI |
12 | Seibel, P. N., Muller, T., Dandekar, T., Schultz, J. & Wolf, M. 2006. 4SALE: a tool for synchronous RNA sequence and secondary structure alignment and editing. BMC Bioinformatics 7:498. DOI |
13 | Proschold, T., Bock, C., Luo, W. & Krienitz, L. 2010. Polyphyletic distribution of bristle formation in Chlorellaceae:Micractinium, Diacanthos, Didymogenes and Hegewaldia gen. nov. (Trebouxiophyceae, Chlorophyta). Phycol. Res. 58:1-8. DOI |
14 | Proschold, T., Darienko, T., Silva, P. C., Reisser, W. & Krienitz, L. 2011. The systematics of Zoochlorella revisited employing an integrative approach. Environ. Microbiol. 13:350-364. DOI |
15 | Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D. L., Darling, A., Hohna, S., Larget, B., Liu, L., Suchard, M. A. & Huelsenbeck, J. P. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst. Biol. 61:539-542. DOI |
16 | Seibel, P. N., Muller, T., Dandekar, T. & Wolf, M. 2008. Synchronous visual analysis and editing of RNA sequence and secondary structure alignments using 4SALE. BMC Res. Notes 1:91. DOI |
17 | Luo, W., Proschold, T., Bock, C. & Krienitz, L. 2010. Generic concept in Chlorella-related coccoid green algae (Chlorophyta, Trebouxiophyceae). Plant Biol. 12:545-553. DOI |
18 | Zidarova, R. P. 2008. Algae from Livingston Island (S Shetland Islands): a checklist. Phytol. Balcan 14:19-35. |
19 | Wall, D. H. 2005. Biodiversity and ecosystem functioning in terrestrial habitats of Antarctica. Antarct. Sci. 17:523-531. DOI |
20 | White, T. J., Bruns, T., Lee, S. & Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In Innis, M. A., Gelfand, D. H., Sninsky, J. J. & White, T. J. (Eds.) PCR Protocols: A Guide to Methods and Applications. Academic Press, San Diego, CA, pp. 315-322. |
21 | Zuker, M. 2003. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 32:3406-3415. DOI |
22 | Fermani, P., Mataloni, G. & Van de Vijver, B. 2007. Soil microalgal communities on an antarctic active volcano (Deception Island, South Shetlands). Polar Biol. 30:1381-1393. DOI |
23 | Convey, P., Hopkins, D. W., Roberts, S. J. & Tyler, A. N. 2011. Global southern limit of flowering plants and moss peat accumulation. Polar Res. 30:8929. DOI |
24 | Darriba, D., Taboada, G. L., Doallo, R. & Posada, D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nat. Methods 9:772. |
25 | Dennis, P. G., Newsham, K. K., Rushton, S. P., O'Donnell, A. G. & Hopkins, D. W. 2019. Soil bacterial diversity is positively associated with air temperature in the maritime Antarctic. Sci. Rep. 9:2686. DOI |
26 | Guindon, S., Dufayard, J. F., Lefort, V., Anisimova, M., Hordijk, W. & Gascuel, O. 2010. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst. Boil. 59:307-321. DOI |
27 | Guiry, M. D. & Guiry, G. M. 2019. AlgaeBase. World-wide electronic publication, National University of Ireland, Galway. Available from: http://www.algaebase.org. Accessed Sep 17, 2019. |
28 | Hall, T. A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 41:95-98. |
29 | Hong, J. W., Jo, S.-W., Cho, H.-W., Nam, S. W., Shin, W., Park, K. M., Lee, K. I. & Yoon, H.-S. 2015. Phylogeny, morphology, and physiology of Micractinium strains isolated from shallow ephemeral freshwater in Antarctica. Phycol. Res. 63:212-218. DOI |
30 | Hamsher, S., Kopalova, K., Kociolek, J. P., Zidarova, R. & Van de Vijver, B. 2016. The genus Nitzschia on the South Shetland Islands and James Ross Island. Fottea 16:79-102. DOI |
31 | Hortobagyi, T. 1973. Neue Chlorococcalen aus den Absetzund Grundwasseranreicherungsbecken der Budapester Wasserwerke. Acta Bot. Acad. Sci. Hung. 18:119-130. |
32 | Hortobagyi, T. 1979. New Chlorococcales species in the Danube hybrid algae? Acta Biol. Szeged 25:7-12. |
33 | Hoshina, R. & Fujiwara, Y. 2013. Molecular characterization of Chlorella cultures of the National Institute for Environmental Studies culture collection with description of Micractinium inermum sp. nov., Didymogenes sphaerica sp. nov., and Didymogenes soliella sp. nov. (Chlorellaceae, Trebouxiophyceae). Phycol. Res. 61:124-132. DOI |
![]() |