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The First Record of the Marphysa victori (Polychaeta, Eunicida, Eunicidae) from Korea, with DNA Barcode Data

  • Kim, Hana;Kim, Keun-Yong;Phoo, War War;Kim, Chang-Hoon
    • Animal Systematics, Evolution and Diversity
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    • v.37 no.1
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    • pp.1-8
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    • 2021
  • A eunicid polychaete, Marphysa victori Lavesque, Daffe, Bonifácio & Hutchings, 2017 is described for the first time from the intertidal zones of the Korean coasts. It is characterized by having three types of pectinate chaetae (INS, isodont-narrow-slender; AWS, anodont-wide-slender; and AWT, anodont-wide-thick), appearance of pectinate chaetae from chaetiger 2, the chaetae consisted of pectinate and compound spinigers, and pygidium with one pair of pygidial cirri. In genetic analysis based on cytochrome c oxidase subunit I (COI), intra-specific genetic distance between the specimens of M. victori from its type locality, France and Korea are in the range of 0.000-0.013. This paper includes the morphological description and photographs of M. victori new to Korean fauna, with partial sequences of the mitochondrial COI as DNA barcode data on this species.

Development of Pyropia yezoensis Mutant with Improved Amino Acid Content Using Gamma Rays (방사선 돌연변이 육종기술을 통한 고 아미노산 함유 김(Pyropia yezoensis) 돌연변이 개발)

  • Lee, Hak-Jeung
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.54 no.6
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    • pp.982-988
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    • 2021
  • Gamma irradiation is one of the simple methods used to induce mutagenesis. Therefore, it is widely used for the development of breeding lineages of plants and algae. In this study, it was developed a new variety of Pyropia yezoensis using gamma irradiation. It was applied a dose of 1 kGy and named the developed mutant Py1k. The blade with width of the mutant was narrower and the blade length was longer than those of the wild type. To further investigate the mutant, it was analyzed the nutrient composition and antioxidant activity. In comparison to those in the wild type, it was found a higher amino acid composition and marginally increased antioxidant activity in Py1k. Based on these results, it was suggests that our protocol can be utilized to develop Pyropia species with improved nutritional quality through gamma irradiation.

Identification and Characterization Colletotrichum spp. Causing Mango Dieback in Indonesia

  • Khaerani Nurlaelita;Arif Wibowo;Ani Widiastuti
    • The Plant Pathology Journal
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    • v.40 no.4
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    • pp.399-407
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    • 2024
  • Dieback disease in mango trees has been observed in Indonesia, particularly in Java Island, with the causal agent remaining unidentified. One of the important pathogens that are responsible for causing mango dieback is Colletotrichum. Field surveys were conducted in various mango cultivating areas in Java Island, Indonesia to assess prevalence of Colletotrichum as dieback disease pathogen. Eleven Colletotrichum isolates were recovered from symptomatic dieback twigs and morphologically characterized. Genetic diversity fingerprint analysis was carried out using rep-PCR. Phylogenetic analysis identified isolates as belonging to Colletotrichum asianum and Colletotrichum cairnsense using partial sequences of four gene regions, including ITS, ACT, GAPDH, and TUB2. Pathogenicity tests on mango seedlings cv. Arumanis showed that all fungal isolates were responsible for causing dieback symptoms. Subsequently, symptomatic tissue was reisolated to fulfill Koch's Postulate. This study represented new funding for two species of Colletotrichum causing mango dieback in Indonesia.

Strategy for Bio-Diversity and Genetic Conservation of Forest Resources in Korea (생물종(生物種) 다양성(多樣性) 및 삼림유전자원(森林遺傳資源) 보존(保存) 전략(戰略))

  • Park, Young Goo
    • Journal of Korean Society of Forest Science
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    • v.83 no.2
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    • pp.191-204
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    • 1994
  • Due to its topographic complexities and various climatical condition, Korea exhibits diverse forest types. Dominant tree species in this zone are Quercus spp., Betula spp., Zelkova spp., Fraxinus spp., Pinus densiflora, Pinus koraiensis, and Pinus thunbergii ete. Genetic conservation in forest species in Korea there are three ways ; one is in situ, other is ex situ and third is in-facility conservation. In situ conservation include that are the present status of conservation of rare and endangered flora and ecosystem, the reserved forest, the national and provincial park, and the gene pool of natural forests. Ex situ conservation means to be established the new forest from in situ forest stands, progeny and provenance test populations, seed orchard and clone banks, and gene conservation in-facility. As a tool for low temperature storage, several aspects on in vitro system were studied ; (1) establishment of in vitro cultures from juvenile and/or rejuvenated tissues, (2) induction of multiple shoots from the individual micropropagules, (3) elongation of the proliferated shoots. Studies on cold storage for short-and long-term maintenance of in vitro cultures under $4^{\circ}C$ in the refrigerator were conducted. For the cryopreservation at $-196^{\circ}C$, various factors affecting survivability of the plant materials are being examined. The necessity of gene conservation of forest trees is enlarged not only to increase the adaptability for various environments but also to gain the breeding materials in the future. For effective gene conservation of forest trees, I would like to suggest followings ; 1. Forest stands reserved for other than the gene conservation purposes such as national parks should be investigated by botanical and gene-ecological studies for selecting bio-diversity and gene conservation stands. 2. Reserved forest for gene pool should be extented both economically important tree spp. and non-economical species. 3. Reserved forest for progeny test and clone bank should be systematically investigated for the use of Ex situ forest gene conservation. 4. We have to find out a new methodology of genetic analysis determining the proper and effective size of subpopulation for in situ gene conservation. 5. We should develop a new tree breeding systems for successful gene conservation and utilization of the genetic resources. 6. New method of in-facility gene conservation using advanced genetic engineering should be developed to save time and economic resources. 7. For the conservation of species with short-life span of seed or shortage of knowledge of seed physiology, tissue culture techniques will be played a great role for gene conservation of those species. 8. It is are very useful conservation not only of genes but of genotypes which were selected already by breeding program. 9. Institutional and administrative arrangements including legistlation must be necessarily taken for gene conservation of forest trees. 10. It is national problems for conservation of forest resources which have been rapidly destroyed because of degenerating environmental condition and of inexperienced management system of bio-diversity and gene conservation. 11. In order to international cooperation for exchanging data of bio-diversity and gene conservation, we should connect to international net works as soon as possible.

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Environmental Pollutants and Epigenetics (환경오염 물질과 에피제네틱스)

  • Park, Sung-Kyun;Lee, Sun-Dong
    • Journal of Environmental Health Sciences
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    • v.35 no.5
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    • pp.343-354
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    • 2009
  • Since Barker found associations between low birth weight and several chronic diseases later in life, the hypothesis of fetal origins of adult disease (aka, Barker Hypothesis) and epigenetics have been emerging as a new paradigm for geneenvironment interaction of chronic disease. Epigenetics is the study of heritable changes in gene silencing that occur without any change in DNA sequence. Gene expression can be regulated by several epigenetic mechanisms, including DNA methylation and histone modifications, which may be associated with chronic conditions, such as cancers, cardiovascular disease, and type-2 diabetes. One carbon metabolism which involves the transfer of a methyl group catalyzed by DNA methyltransferase is an important mechanism by which DNA methylation occurs in promoter regions and/or repetitive elements of the genome. Environmental factors may induce epigenetic modification through production of reactive oxygen species, alteration of methyltransferase activity, and/or interference with methyl donors. In this review, we introduce recent studies of epigenetic modification and environmental factors, such as heavy metals, environmental hormones, air pollution, diet and psychosocial stress. We also discuss epigenetic perspectives of early life environmental exposure and late life disease occurrence.

Hyphomycetes from Korean Soil. I. The Genus Penicillium with a Teleomorphic State Eupenicillium javanicum. (한국 토괴중의 사상균에 관한 연구. I. Penicillium속과 자양균 Eupenicillium javanicum에 관하여)

  • Kyung Hee MIN;Hong Soon Woo;Tatsuo YOKOYAMA
    • Korean Journal of Microbiology
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    • v.18 no.2
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    • pp.91-103
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    • 1980
  • A mycological survey was carried out with the soil samples collected in Korea from Sptember, 1978 to December, 1979. Special attention was paid fungus genus Penicillum. One hundred twenty three isolates, as a result, were obtained from the Korean soils. Among these, sixteen species were iedentified and described in this paper. Almost all of the fungi reported here are new to Korea. One of them is an asomycete cleisothecia of $120~50\mu$ in diameter. Ascospores of this fungus were found lenticular with an equatorial furrow as indicated in the previous descriptions.

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Austropeplea ollular (Pulmonata: Lymnaeidae): a new first intermediate host of Neodiplostomum seoulense ( Trematoda : Diplostomatidae ) in Korea ("이전고환극구흡충" 패류중간숙주로서의 "애기물달팽이")

  • Chung, Pyung-Rim;Younghun Jung;Hwang, Myung-Gi
    • Proceedings of the Korean Society of Fisheries Technology Conference
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    • 2000.05a
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    • pp.512-512
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    • 2000
  • Some planorbid snails such as Hippeutis cantori and Segmentina hemisphaerula have reported as the molluscan intermediate hosts of Neodiplostomum seoulense, one of important snail-borne human intestinal trematodes in Korea. However, one of the Korean lymnaeid snail species, Austropeplea ollular was also found to be the first intermediate ho of N. seoulense. In field-collected Austropeplea snails from Sorae and Kimpo out of se collected localities, the bifurcated cercariae of N. seoulense were shed (infection rat 0.3%), whereas no Radix auricularia and Fossaria truncatula were found shedding cercariae. Each of 12 tadpoles of Rana nigromaculata, known as the second intermedia host of N. seoulense, were exposed to 200 cercariae shed from field-collected A ollula. F tadpoles of R. nigromaculata were found to be massively infected with metacercariae o N. seoulense (recovery rate: 62.1%). Each of five rats (Sprague-Dowley strain) was or fed with 200 metacercariae, and eggs of N. seoulense were detected in the rat feces on week later. These rats were killed 4 weeks after postinfection and adult worms of N seoulense were recovered from the small intestines (recovery rate: 9%). This is the f report of A. ollula as the first molluscan intermediate host for N. seoulense in Korea.

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Novel Synthesis of bis Acetylated Hybrid Pyrazoles as Potent Anticandidiasis Agents (항칸다디아 활성이 우수한 bis acetylated hybrid pyrazoles의 합성 연구)

  • Kanagarajan, V.;Ezhilarasi, M. R.;Gopalakrishnan, M.
    • Journal of the Korean Chemical Society
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    • v.55 no.2
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    • pp.256-261
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    • 2011
  • A new series of bis acetylated hybrid pyrazoles were synthesized and characterized by their melting point, elemental analysis, MS, FT-IR, one-dimensional $^1H$, and $^{13}C$ NMR spectroscopic data. All the synthesized compounds were tested for their in vitro antifungal activities against Candida sp. namely Candida albicans, Candida glabrata, Candida parapsilosis, Candida dubliniensis and Candida tropicalis. A close inspection of the in vitro anticandidal activity profile in differently electron donating ($CH_3$ and $OCH_3$) and electron withdrawing (-F, -Cl, and Br) functional group substituted phenyl rings of novel hybrid pyrazoles exerted strong anticandidal activity against all the tested Candida species.

Similarity of Zooplankton Community Structure among Reservoirs in Yeongsan-Seomjin River Basin (영산강, 섬진강 수계 내 주요 저수지에 대한 동물플랑크톤 군집 구조의 유사성 분석)

  • Ko, Eui-Jeong;Kim, Gu-Yeon;Joo, Gea-Jae;Kim, Hyun-Woo
    • Korean Journal of Ecology and Environment
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    • v.52 no.4
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    • pp.285-292
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    • 2019
  • Our study was based on the long-term surveys with respect to the major reservoirs located in the Yeongsan and Seomjin river basins. A total of 45 survey sites have been surveyed four times a year from 2008 to 2017. We identified 166 zooplankton species, including 127 rotifers, 26 cladocerans, and 13 copepods. Mean population density and species number of small reservoirs were higher than those of mid and large reservoirs. Considering outliers exceeding the 90th percentile between species occupancy and mean abundance, 10 of 11 habitat generalists were rotifers, and Bosmina longirostris was the only cladoceran. Habitat specialist consisted of three species of rotifers and emerged from one to three survey sites. According to the modularity results, it was found that the survey sites covering the entire river basins were characterized into five groups, which was similar to the classification by maximum water surface areas(MWSA). The result of the eigenvector centrality showed that the size of MWSA had a greater impact on the similarity of zooplankton community structure between reservoirs than the difference in distance between reservoirs. In the case of survey points in near dam or estuary bank of Juam and Youngsan reservoirs, modularity class were separated from other internal survey points of those. Given that the zooplankton interactions may contribute to freshwater functions more than species diversity. These topological features provide new insight into studying zooplankton distribution patterns, their organization and impacts on freshwater-associated function.

Manganese and Iron Interaction: a Mechanism of Manganese-Induced Parkinsonism

  • Zheng, Wei
    • Proceedings of the Korea Environmental Mutagen Society Conference
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    • 2003.10a
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    • pp.34-63
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    • 2003
  • Occupational and environmental exposure to manganese continue to represent a realistic public health problem in both developed and developing countries. Increased utility of MMT as a replacement for lead in gasoline creates a new source of environmental exposure to manganese. It is, therefore, imperative that further attention be directed at molecular neurotoxicology of manganese. A Need for a more complete understanding of manganese functions both in health and disease, and for a better defined role of manganese in iron metabolism is well substantiated. The in-depth studies in this area should provide novel information on the potential public health risk associated with manganese exposure. It will also explore novel mechanism(s) of manganese-induced neurotoxicity from the angle of Mn-Fe interaction at both systemic and cellular levels. More importantly, the result of these studies will offer clues to the etiology of IPD and its associated abnormal iron and energy metabolism. To achieve these goals, however, a number of outstanding questions remain to be resolved. First, one must understand what species of manganese in the biological matrices plays critical role in the induction of neurotoxicity, Mn(II) or Mn(III)? In our own studies with aconitase, Cpx-I, and Cpx-II, manganese was added to the buffers as the divalent salt, i.e., $MnCl_2$. While it is quite reasonable to suggest that the effect on aconitase and/or Cpx-I activites was associated with the divalent species of manganese, the experimental design does not preclude the possibility that a manganese species of higher oxidation state, such as Mn(III), is required for the induction of these effects. The ionic radius of Mn(III) is 65 ppm, which is similar to the ionic size to Fe(III) (65 ppm at the high spin state) in aconitase (Nieboer and Fletcher, 1996; Sneed et al., 1953). Thus it is plausible that the higher oxidation state of manganese optimally fits into the geometric space of aconitase, serving as the active species in this enzymatic reaction. In the current literature, most of the studies on manganese toxicity have used Mn(II) as $MnCl_2$ rather than Mn(III). The obvious advantage of Mn(II) is its good water solubility, which allows effortless preparation in either in vivo or in vitro investigation, whereas almost all of the Mn(III) salt products on the comparison between two valent manganese species nearly infeasible. Thus a more intimate collaboration with physiochemists to develop a better way to study Mn(III) species in biological matrices is pressingly needed. Second, In spite of the special affinity of manganese for mitochondria and its similar chemical properties to iron, there is a sound reason to postulate that manganese may act as an iron surrogate in certain iron-requiring enzymes. It is, therefore, imperative to design the physiochemical studies to determine whether manganese can indeed exchange with iron in proteins, and to understand how manganese interacts with tertiary structure of proteins. The studies on binding properties (such as affinity constant, dissociation parameter, etc.) of manganese and iron to key enzymes associated with iron and energy regulation would add additional information to our knowledge of Mn-Fe neurotoxicity. Third, manganese exposure, either in vivo or in vitro, promotes cellular overload of iron. It is still unclear, however, how exactly manganese interacts with cellular iron regulatory processes and what is the mechanism underlying this cellular iron overload. As discussed above, the binding of IRP-I to TfR mRNA leads to the expression of TfR, thereby increasing cellular iron uptake. The sequence encoding TfR mRNA, in particular IRE fragments, has been well-documented in literature. It is therefore possible to use molecular technique to elaborate whether manganese cytotoxicity influences the mRNA expression of iron regulatory proteins and how manganese exposure alters the binding activity of IPRs to TfR mRNA. Finally, the current manganese investigation has largely focused on the issues ranging from disposition/toxicity study to the characterization of clinical symptoms. Much less has been done regarding the risk assessment of environmenta/occupational exposure. One of the unsolved, pressing puzzles is the lack of reliable biomarker(s) for manganese-induced neurologic lesions in long-term, low-level exposure situation. Lack of such a diagnostic means renders it impossible to assess the human health risk and long-term social impact associated with potentially elevated manganese in environment. The biochemical interaction between manganese and iron, particularly the ensuing subtle changes of certain relevant proteins, provides the opportunity to identify and develop such a specific biomarker for manganese-induced neuronal damage. By learning the molecular mechanism of cytotoxicity, one will be able to find a better way for prediction and treatment of manganese-initiated neurodegenerative diseases.

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