• Title/Summary/Keyword: OCT

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Simple Spectral Calibration Method and Its Application Using an Index Array for Swept Source Optical Coherence Tomography

  • Jung, Un-Sang;Cho, Nam-Hyun;Kim, Su-Hwan;Jeong, Hyo-Sang;Kim, Jee-Hyun;Ahn, Yeh-Chan
    • Journal of the Optical Society of Korea
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    • v.15 no.4
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    • pp.386-393
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    • 2011
  • In this study, we report an effective k-domain linearization method with a pre-calibrated indexed look-up table. The method minimizes k-domain nonlinear characteristics of a swept source optical coherence tomography (SS-OCT) system by using two arrays, a sample position shift index and an intensity compensation array. Two arrays are generated from an interference pattern acquired by connecting a Fabry-Perot interferometer (FPI) and an optical spectrum analyzer (OSA) to the system. At real time imaging, the sample position is modified by location movement and intensity compensation with two arrays for linearity of wavenumber. As a result of evaluating point spread functions (PSFs), the signal to noise ratio (SNR) is increased by 9.7 dB. When applied to infrared (IR) sensing card imaging, the SNR is increased by 1.29 dB and the contrast noise ratio (CNR) value is increased by 1.44. The time required for the linearization and intensity compensation is 30 ms for a multi thread method using a central processing unit (CPU) compared to 0.8 ms for compute unified device architecture (CUDA) processing using a graphics processing unit (GPU). We verified that our linearization method is appropriate for applying real time imaging of SS-OCT.

Initial Excess Pore Pressure Induced by Cone Penetration in Normally Consolidated Clays (정규압밀점토에서의 피에조 콘 관입에 의한 과잉간극수압에 대한 연구)

  • 임형덕;이우진;김대규
    • Journal of the Korean Geotechnical Society
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    • v.19 no.1
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    • pp.151-161
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    • 2003
  • In this study, an interpretation method is proposed to evaluate the stress conditions, including individual excess pore pressure components ($\Delta{u}_{oct}$/ and $\Delta{u}_{shear}$), of normally consolidated clay elements adjacent to the cone face. It is assumed that the stress path of triaxial compression is representative f3r that of the soil element and the soil is elastic-perfectly plastic material. The proposed method is applied to the results of miniature piezocone tests conducted at Louisiana State University calibration chamber system. Based on the results of interpretation, it was found that the ratio of $\Delta{u}_{oct}$/ $\Delta{u}$and $\Delta{u}_{shear}$/$\Delta{u}$ estimated by the proposed method is affected only by the pore pressure parameter. The proposed method gives consistent and reliable values of $\Delta{u}_{oct}$/ $\Delta{u}$and $\Delta{u}_{shear}$/$\Delta{u}$ compared with early works, whereas those obtained by other solutions are significantly dependent on the accuracy in estimating soil properties such as undrained shear strength and rigidity index.

Estimation of Coefficient of Consolidation Using Piezocone Dissipation Test in Normally Consolidated Clays (정규압밀점토에서의 피에조 콘 소산시험을 이용한 수평압밀계수의 산정)

  • 임형덕;이우진;김대규
    • Journal of the Korean Geotechnical Society
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    • v.19 no.5
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    • pp.145-154
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    • 2003
  • In this study, the variation in excess pore pressure during dissipation is estimated by using successive cavity expansion theory and finite difference technique based on axisymmetric uncoupled linear consolidation theory with separate consideration of magnitude and initial distribution $\Delta{u}_{oct}$induced by changes of octahedral normal stress, and $\Delta{u}_{shear}$ induced by changes of octahedral shear stress. The coefficient of consolidation is also estimated by trial and error procedure until the predicted dissipation curve matches the measured curve at a typical degree of dissipation. The proposed method is applied to the results of miniature piezocone tests at Louisiana State University calibration chamber system. Based on the results of interpretation and the comparison with experimental measurements and those from other solutions, the prediction dissipation curves show a good match with those measured during dissipation tests and the values of coefficient of consolidation estimated by proposed method are more close to the range of laboratory measurements than those of other theories.

A Comparative Study of Sepiae Os, Arcae Concha, Ostreae Concha and Esomeprazole in a Mouse Model of Reflux Esophagitis (역류성 식도염 생쥐 모델에서 해표초, 와릉자, 모려와 Esomeprazole의 치료효과에 대한 비교 연구)

  • Song, Chang-Hun;Baek, Tae-Hyun
    • The Journal of Korean Medicine
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    • v.39 no.2
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    • pp.92-105
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    • 2018
  • Objectives: This aim of this study is to compare the reflux esophagitis improvement effects of Sepiae Os, Arcae Concha, Ostreae Concha, and Proton Pump Inhibitor(esomeprazole) through rat experiments. Methods: NO production inhibitory effect was measured by NO production amount and iNOS mRNA expression level in cell lines. iNOS, $TNF-{\alpha}$ and $p-I{\kappa}B$, and serotonin were compared using immunohistochemistry at the rat reflux esophagitis. Reflux esophagitis connection external form, lower esophageal sphincter, and gap were observed and an esophageal inflammatory indicator, IL-6 activity was also evaluated by immunohistochemistry. Results: NO production and iNOS mRNA expression was showed concentration dependent decrease in cell lines treated with Sepiae OS, Arcae Concha, and Ostreae Concha at the experiments of cell lines. In the suppression of iNOS and $p-I{\kappa}B$ at the rat reflux esophagitis, Sepiae Os treat group(SOT) and Ostreae Concha treat group(OCT) were more effective. In the increase of serotonin at the rat reflux esophagitis, ACT, MT and OCT were more effective. Damage of lower esophageal sphincter, and gap between esophageal keratin and mucosa were observed less at the SOT, ACT, OCT. In the suppression of IL-6 at the rat reflux esophagitis, SOT and OCT were more effective than GE and, SOT was more effective than MT significantly. Conclusions: The anti-inflammatory effect was the best in the SOT and lower esophageal sphincter muscle contraction was the best in the ACT at the rat reflux esophagitis. Sepiae OS was more effective than esomeprazole in the suppression of iNOS, $TNF-{\alpha}$, and IL-6.

Impact of Global and Gene-Specific DNA Methylation in de Novo or Relapsed Acute Myeloid Leukemia Patients Treated with Decitabine

  • Zhang, Li-Ying;Yuan, You-Qing;Zhou, Dong-Ming;Wang, Zi-Yan;Ju, Song-Guang;Sun, Yu;Li, Jun;Fu, Jin-Xiang
    • Asian Pacific Journal of Cancer Prevention
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    • v.17 no.1
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    • pp.431-437
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    • 2016
  • In this investigation, global DNA methylation patterns and the specific methylation status of 5 genes were studied in DNA from peripheral blood (PB) and impact on progression free survival (PFS) and overall-survival (OS) in patients with de novo or relapsed acute myeloid leukemia (AML) treated with decitabine-based regimens waas assessed. DNA was isolated from PB samples at the time of -1, 1, and 7 days of chemotherapy. Global methylation was determined by ELISA, and the CpG island DNA methylation profile of 5 genes using a DNA methylation PCR system. Our data demonstrated that patients with a high level of 5-mC had a poor prognosis after demethylation therapy and those who have low levels of 5-mC in PB achieved higher CR and better SO, but there was no significant correlation found between the 5-mC levels and other clinical features before treatment except the disease status. Higher methylation status of Sox2 and Oct4 genes was associated with differential response to demethylation therapy. A relatively low methylation percentage in one or both of these two genes was also associated with longer OS after decitabine based chemotherapy. We also suggest that global DNA and Oct-4/Sox2 methylation might impact on the pathogenesis of leukemia and play an important role in the initiation and progression. Moreover, dynamic analysis of 5-mC and Oct-4/Sox2 in peripheral blood nucleated cells of leukemia patients may provide clues to important molecular diagnostic and prognostic targets.

Crystal Structure of 1-Cyclopropyl-7-(2,7-diazabicyclo[3.3.0]oct-4-en-7-yl)-6-fluoro-8-methoxy-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (HCI salt) (1-Cyclopropyl-7-(2,7-diazabicyclo[3.3.0]oct-4-en-7-yl)-6-fluoro-8-methoxy-4-oxo-1,4-dihydroquinoline-3-carboxylic acid 염산염의 결정구조)

  • 김문집;신준철
    • Korean Journal of Crystallography
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    • v.6 no.2
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    • pp.103-110
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    • 1995
  • The crystal structure of 1-Cyclopropyl-7-(2,7-diazabicyclo[3.3.0]oct-4-en-7-yl)-6-fluoro-8-methoxy-4-oxo-1,4-dihydroquinoline-3-carboxylic acid (HCI salt) has been determined from single crystal x-ray diffraction study ; C20H21N3O4FCl, Monoclinic, C2/c, a=28.349(2)Å, b=11.941(2)Å, c=12.806(2)Å, β=96.428(9)°, V=4307.8Å3, T=296(2)K, Z=8, CuKα(λ=1.5418Å). The molecular structure was solved by direct method and refined by full-matrix least squares to a final R=4.96% for 2258 unique observed F0>4σ(F0) reflections and 293 parameters. The conformation of the molecule is stabilized by an intramolecular O(28)-H(28)…O(25) [2.517(4)Å, 156.7(447)°] hydrogen bond. Intermoleculars distances correspond to van der Waals contacts.

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Donepezil, Tacrine and $\alpha-Phenyl-n-tert-Butyl Nitrone$ (PBN) Inhibit Choline Transport by Conditionally Immortalized Rat Brain Capillary Endothelial Cell Lines (TR-BBB)

  • Kang Young-Sook;Lee Kyeong-Eun;Lee Na-Young;Terasaki Tetsuya
    • Archives of Pharmacal Research
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    • v.28 no.4
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    • pp.443-450
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    • 2005
  • In the present study, we have characterized the choline transport system and examined the influence of various amine drugs on the choline transporter using a conditionally immortalized rat brain capillary endothelial cell line (TR-BBB) in vitro. The cell-to-medium (C/M) ratio of $[^3{H}]choline$ in TR-BBB cells increased time-dependently. The initial uptake rate of $[^3{H}]choline$ was concentration-dependent with a Michaelis-Menten value, $K_{m}$, of $26.2\pm2.7{\mu}M$. The $[^3{H}]choline$ uptake into TR-BBB was $Na^{+}-independent$, but was membrane potential-dependent. The $[^3{H}]choline$ uptake was susceptible to inhibition by hemicholinium-3, and tetraethy-lammonium (TEA), which are organic cation transporter substrates. Also, the uptake of $[^3{H}]choline$ was competitively inhibited with $K_{i}$ values of $274 {\mu}M, 251 {\mu}M and 180 {\mu}M$ in the presence of donepezil hydrochloride, tacrine and $\alpha-phenyl-n-tert-butyl nitrone$ (PBN), respectively. These characteristics of choline transport are consistent with those of the organic cation transporter (OCT). OCT2 mRNA was expressed in TR-BBB cells, while the expression of OCT3 or choline transporter (CHT) was not detected. Accordingly, these results suggest that OCT2 is a candidate for choline transport at the BBB and may influence the BBB permeability of amine drugs.

Effects of Harvesting Date and Additives on the Quality of Fall Sown Oat ( Avena sativa L. ) Silage (수확시기 및 첨가제가 연맥 사일리지의 품질에 미치는 영향)

  • 이성철
    • Journal of The Korean Society of Grassland and Forage Science
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    • v.18 no.2
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    • pp.157-162
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    • 1998
  • This experiment was carried out to investigate the effects of harvesting date and additives on the quality of fall sown oat(Avena sativa L.) silage at the department of animal resources science, college of life resources science, Woosuk University, Wanju &om August, 1997 to March, 1998. The experiment was arranged in a split plot design with three replications. The main plots consisted of the harvesting date such as 15 Oct., 23 Oct. and 2 Nov. and different additives as subplots(control, wheat bran, formic acid, lactic acid bacteria, and wilting). The results otained are summarized as follow : The fiesh and dry matter yield of oat were increased by harvesting date delayed, then fiesh and dry matter yield at 2 Nov. were highest as 36,733 and 7,29Okg/ha, respectively. The dry matter content of oat silage was increased significantly by harvesting date delayed(P< 0.05), and DM content of wheat bran and wilting treatment was high at every harvest date. The DM loss was lower in LAB, formic acid and wheat bran treatment, but on significant difference was found among harvesting date(P< 0.05). Average pH of silage harvested at 23 Oct. was lowest as 4.06, and the quality(CP, NDF, ADF, and IVMDM) of oat silage was decreased by harvesting date delayed. The content of acetic acid was no difference among harvesting date, but butyric acid was decreased and lactic acid was increased at 23 Oct. harvest. The result of this study indicate that oat harvested at booting-heading stage of maturity with wilting wheat bran, and LAB could be recommended as producing high quality of oat silage.

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Optical Monitoring of Tumors in BALB/c Nude Mice Using Optical Coherence Tomography

  • Song, Hyun-Woo;Lee, Sang-Won;Jung, Myung-Hwan;Kim, Kye Ryung;Yang, Seungkyoung;Park, Jeong Won;Jeong, Min-Sook;Jung, Moon Youn;Kim, Seunghwan
    • Journal of the Optical Society of Korea
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    • v.17 no.1
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    • pp.91-96
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    • 2013
  • We report a method for optical monitoring of tumors in an animal model using optical coherence tomography (OCT). In a spectral domain OCT system, a superluminescent diode light source with a full width of 66 nm at half maximum and peak wavelength of 950 nm was used to take images having an axial resolution of 6.8 ${\mu}m$. Cancer cells of PC-3 were cultured and inoculated into the hypodermis of auricle tissues in BALB/c nude mice. We observed tumor formation and growth at the injection region of cancer cells in vivo and obtained the images of tumor mass center and sparse circumferences. On the $5^{th}$ day from an inoculation of cancer cells, histological images of the tumor region using cross-sectional slicing and dye staining of specimens were taken in order to confirm the correlation with the high resolution OCT images. The OCT image of tumor mass compared with normal tissues was analyzed using its A-scan data so as to obtain a tissue attenuation rate which increases according to tumor growth.

Development of The Intraoperative Surgical Optical Coherence Tomography Probe (실시간 광단층 모니터링 안구 수술용 현미경 프로브 개발)

  • Kim, Kyung-Un;Lee, Chang-Ho;Jeong, Hyo-Sang;Han, Seung-Hoon;Kim, Hong-Kyun;Kim, Jee-Hyun
    • Journal of Biomedical Engineering Research
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    • v.33 no.2
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    • pp.53-58
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    • 2012
  • Intraoperative surgical microscope is an essential surgical equipment. However, it has a restriction to classify the retina layers because of the contrast differences. To solve this problem, operators use surgical instrument such as an intraocular mirror. In this case, it has to amputate the patient's eye. In this study, we developed a probe the intraoperative surgical optical coherence tomography. We expect that the developed OCT probe can overcome the limit of OCT and be applied as a real-time surgical tool. In this paper, we demonstrate applicability of the probe through rabbit's experimentation.