• Korean Journal of Environment and Ecology
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• v.20 no.1
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• pp.1-8
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• 2006

The objective of this study was to monitor the regenerated process of natural vegetation on the rear-slope of Jangheung multi-purpose dam using the recycling eco-revegetation technique. The monitoring plots were established in May 2004 and the plots were monitored in May 2004 and October 2005. Flora, plant community structures, naturally introduced plants, death rates were monitored. The change of flora after wood chip mulching decreased in family and species, but the influence of vine tree was extended. The urbanization index declined. Naturally introduced species and death ratios at the monitoring plot had a tendency to a higher increase in the deciduous broad-leaved forest.

• Journal of KIISE:Computer Systems and Theory
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• v.36 no.4
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• pp.231-238
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• 2009

DNA sequences are the fundamental information for each species and a comparison between DNA sequences of different species is an important task. Since DNA sequences are very long and there exist many species, not only fast matching but also efficient storage is an important factor for DNA sequences. Thus, a fast string matching method suitable for encoded DNA sequences is needed. In this paper, we present a fast string matching method for encoded DNA sequences which does not decode DNA sequences while matching. We use four-characters-to-one-byte encoding and combine a suffix approach and a multi-pattern matching approach. Experimental results show that our method is about 5 times faster than AGREP and the fastest among known algorithms.

• The Plant Pathology Journal
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• v.37 no.3
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• pp.243-257
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• 2021

Bacillus pumilus is the causal agent of trunk bulges disease affecting rubber and rubberwood quality and yield production. In this study, B. pumilus and other closely related species were included in B. pumilus group, as they shared over 99.5% similarity from 16S rRNA analysis. Multilocus sequence analysis (MLSA) of five housekeeping genes and repetitive elements-based polymerase chain reaction (rep-PCR) using REP, ERIC, and BOX primers conducted to analyze the diversity and systematic relationships of 20 isolates of B. pumilus group from four rubber tree plantations in Peninsular Malaysia (Serdang, Tanah Merah, Baling, and Rawang). Multi rep-PCR results revealed the genetic profiling among the B. pumilus group isolates, while MLSA results showed 98-100% similarity across the 20 isolates of B. pumilus group species. These 20 isolates, formerly established as B. pumilus, were found not to be grouped with B. pumilus. However, being distributed within distinctive groups of the B. pumilus group comprising of two clusters, A and B. Cluster A contained of 17 isolates close to B. altitudinis, whereas Cluster B consisted of three isolates attributed to B. safensis. This is the first MLSA and rep-PCR study on B. pumilus group, which provides an in-depth understanding of the diversity of these rubber-pathogenic isolates in Malaysia.

• Journal of Environmental Health Sciences
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• v.42 no.1
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• pp.34-40
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• 2016

Objectives: This study aims to examine the concentration, diversity, and antibiotic characteristics of penicillin G resistant enterobacteria present in pharmaceutical effluent. Methods: Water sampling was performed from a pharmaceutical company in Gyeonggi-do Province, Korea in March 2015. Water samples were plated in triplicate on tryptic soy agar plates with 32 mg/L of penicillin G. Penicillin G resistant enterobacteria were selected from the effluent and were subjected to 16S rRNA analysis for penicillin G resistant species determination. Identified resistant strains were tested for resistance to various antibiotics. Results: Penicillin G resistant enterobacteria were present at 6.2% as to culturable heterotrophic bacteria. Identified penicillin G resistant enterobacteria exhibited resistance to more than 10 of the antibiotics studied. These resistant bacteria are gram negative and are closely related to pathogenic species. Conclusion: Multi-antibiotic resistant bacteria in the effluent suggest a need for disinfection and advanced oxidation processes for pharmaceutical effluents.

• Computers and Concrete
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• v.13 no.2
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• pp.149-171
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• 2014

This study presents the mathematical model for predicting chloride penetration into saturated concrete under non-isothermal condition. The model considers not only diffusion mechanism but also migration process of chloride ions and other chemical species in concrete pore solution such as sodium, potassium, and hydroxyl ions. The coupled multi-ionic transport in concrete is described by the Nernst-Planck equation associated with electro-neutrality condition. The coupling parameter taken into account the effect of temperature on ion diffusion obtained from available test data is proposed and explicitly incorporated in the governing equations. The coupled transport equations are solved using the finite element method. The numerical results are validated with available experimental data and the comparison shows a good agreement.

• Journal of fish pathology
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• v.25 no.2
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• pp.77-84
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• 2012

Various antibiotics, that could induce the appearance of resistant microorganisms, have been used for treatment or prevention of bacterial diseases in marine and ornamental fish. We determined and characterized the level of antibiotic-resistant bacteria and proportion of multi-drug resistant bacteria in intestinal microflora of both marine fish cultured in Korea and imported ornamental freshwater fish. For this the bacterial species and resistance to antibiotics were investigated in intestine of rock bream Oplegnathus fasciatus cultured in Korea and pearl gourami Trichogaster leeri imported from Singapore to characterise. Although the bacterial species were different, proportions of resistant bacteria to single antibiotics or multi-drug were higher in intestinal microflora of pearl gourami Trichogaster leeri imported from Singapore than in rock bream Oplegnathus fasciatus cultured in Korea. These results indicate that various antibiotics have been being used before trading without measures in the market of asian ornamental fishes, providing high risks for the emergence of multi-drug resistant bacteria.

• Journal of Information Processing Systems
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• v.16 no.5
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• pp.1083-1094
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• 2020

Recognizing plant species based on leaf images is challenging because of the large inter-class variation and inter-class similarities among different plant species. The effective extraction of leaf descriptors constitutes the most important problem in plant leaf recognition. In this paper, a multi-scale angular description method is proposed for fast and accurate leaf recognition and retrieval tasks. The proposed method uses a novel scale-generation rule to develop an angular description of leaf contours. It is parameter-free and can capture leaf features from coarse to fine at multiple scales. A fast Fourier transform is used to make the descriptor compact and is effective in matching samples. Both support vector machine and k-nearest neighbors are used to classify leaves. Leaf recognition and retrieval experiments were conducted on three challenging datasets, namely Swedish leaf, Flavia leaf, and ImageCLEF2012 leaf. The results are evaluated with the widely used standard metrics and compared with several state-of-the-art methods. The results and comparisons show that the proposed method not only requires a low computational time, but also achieves good recognition and retrieval accuracies on challenging datasets.

• Journal of the Korean Society of Fisheries and Ocean Technology
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• v.52 no.1
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• pp.48-55
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• 2016

The species composition and distribution of catches by dredge gear in the Yeongil Bay, Korea were investigated on a seasonal basis from February to November, 2015. Total catches consisted of 44 species and 35 families. They were 13 species of fish, 10 species of crustacea, 5 species of echinodermata, 5 species of gastropoda, 4 species of cephalopoda and 3 species of bivalvia. Major catch species was shellfish and had seasonal variations in catch. In spring and winter, the catch of ark shell (Scapharca broughtonii) was increased. Adversely, the catch of admas venus clam (Callithaca adamsi) increased in sunmmer and autumn. Species diversity indices was high as the value of 1.99 in spring, and low to the value of 0.34 in summer. In addition, multi dimentional scaling (MDS) indices also was high in spring as the value of 1.99. In summer, the index was low as the value of 0.34. Similarity analysis based on species data was transformed by fourth root. With the result of cluster analysis and MDS analysis, species was divided into two groups. The first group as Group A consists of winter and spring species and another was Group B made of species in summer and winter.

• The Korean Journal of Mycology
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• v.46 no.4
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• pp.375-382
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• 2018

Members of the genus Mortierella (Mortierellales) are filamentous fungi, which are found on nearly all substrates, but more frequently in soil. Till date, 7 species of Mortierella have been reported in Korea, but being a ubiquitous group with high species diversity in temperate zones, this number is still low. During a survey of fungal biodiversity in Korea, we collected many isolates of Mortierella, and through morphological and molecular phylogenetic analyses, identified them to be 3 previously unrecorded species, namely, M. chienii, M. epicladia, and M. gamsii. A total of 10 Mortierella species in Korea, including the 3 species reported in the present study, are widely distributed in 5 out of 7 phylogenetic groups of this genus. This indicates that the diversity of Mortierella was so far underestimated in Korea. Multi-locus sequence analysis is required to provide a more reliable backbone for some uncertain phylogenetic groupings and to more clearly define a species of Mortierella, which would encourage deeper research in the diversity and ecological roles of Mortierella and allied genera.

• Journal of Korean Society of Water and Wastewater
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• v.32 no.4
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• pp.349-355
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• 2018

This study interrogated multi-layer heterojunction anodes were interrogated for potential applications to water treatment. The multi-layer anodes with outer layers of $SnO_2/Bi_2O_3$ and/or $TiO_2/Bi_2O_3$ onto $IrO_2/Ta_2O_5$ electrodes were prepared by thermal decomposition and characterized in terms of reactive chlorine species (RCS) generation in 50 mM NaCl solutions. The $IrO_2/Ta_2O_5$ layer on Ti substrate (Anode 1) primarily served as an electron shuttle. The current efficiency (CE) and energy efficiency (EE) for RCS generation were significantly enhanced by the further coating of $SnO_2/Bi_2O_3$ (Anode 2) and $TiO_2/Bi_2O_3$ (Anode 3) layers onto the Anode 1, despite moderate losses in electrical conductivity and active surface area. The CE of the Anode 3 was found to show the highest RCS generation rate, whereas the multi-junction architecture (Anode 4, sequential coating of $IrO_2/Ta_2O_5$, $SnO_2/Bi_2O_3$, and $TiO_2/Bi_2O_3$) showed marginal improvement. The microscopic observations indicated that the outer $TiO_2/Bi_2O_3$ could form a crack-free layer by an incorporation of anatase $TiO_2$ particles, potentially increasing the service life of the anode. The results of this study are expected to broaden the usage of dimensionally stable anodes in water treatment with an enhanced RCS generation and lifetime.