• Title/Summary/Keyword: Mixed-Model production

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Separation of Glycoprotein and its Anticancer Immunostimulating Activity from Dried Barks of Slippery Elm [Ulmus parvifolia] (유근피(楡根皮)로부터 단백다당체의 분리 및 항암 면역활성 연구)

  • 양영렬;김영주;김경화;오유진
    • KSBB Journal
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    • v.16 no.6
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    • pp.547-553
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    • 2001
  • Glycoprotein from the water extract of dried root barks of slippery Elm was investigated for its anticancer immunostimulating activity, The glycoprotein contained molecular weight 15,000 to 500,000 Da, total carbohydrates 55.8 to 72.1%), total uronic acid 30.0 to 30.5%, and total proteins 5.0 to 6.1%. The anticancer immunostimulating activities were examined for both in vitro bioassays such as immune cell proliferation assay, mixed lymphocyte reaction (MLR), direct mitogenicity, T-dependent antibody production, and in vivo bioassays such as septic shock test and anticancer activity test in B16 melanoma transplanted mouse model. In vivo assay, the glycoprotein at the concentration of 3 mg/kg showed the best result that median survival time increased to about 140% in contrast to control groups.

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Genetic parameters for marbling and body score in Anglonubian goats using Bayesian inference via threshold and linear models

  • Figueiredo Filho, Luiz Antonio Silva;Sarmento, Jose Lindenberg Rocha;Campelo, Jose Elivalto Guimaraes;de Oliveira Almeida, Marcos Jacob;de Sousa, Antonio Junior;da Silva Santos, Natanael Pereira;da Silva Costa, Marcio;Torres, Tatiana Saraiva;Sena, Luciano Silva
    • Asian-Australasian Journal of Animal Sciences
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    • v.31 no.9
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    • pp.1407-1414
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    • 2018
  • Objective: The aim of this study was to estimate (co) variance components and genetic parameters for categorical carcass traits using Bayesian inference via mixed linear and threshold animal models in Anglonubian goats. Methods: Data were obtained from Anglonubian goats reared in the Brazilian Mid-North region. The traits in study were body condition score, marbling in the rib eye, ribeye area, fat thickness of the sternum, hip height, leg perimeter, and body weight. The numerator relationship matrix contained information from 793 animals. The single- and two-trait analyses were performed to estimate (co) variance components and genetic parameters via linear and threshold animal models. For estimation of genetic parameters, chains with 2 and 4 million cycles were tested. An 1,000,000-cycle initial burn-in was considered with values taken every 250 cycles, in a total of 4,000 samples. Convergence was monitored by Geweke criteria and Monte Carlo error chain. Results: Threshold model best fits categorical data since it is more efficient to detect genetic variability. In two-trait analysis the contribution of the increase in information and the correlations between traits contributed to increase the estimated values for (co) variance components and heritability, in comparison to single-trait analysis. Heritability estimates for the study traits were from low to moderate magnitude. Conclusion: Direct selection of the continuous distribution of traits such as thickness sternal fat and hip height allows obtaining the indirect selection for marbling of ribeye.

Optimization of Energy Distribution in District Heating Systems (지역 냉난방 시스템의 에너지 분배 최적화)

  • Park, Tae Chang;Kim, Ui Sik;Kim, Lae-Hyun;Kim, Weon Ho;Kim, Seong Jin;Yeo, Yeong Koo
    • Korean Chemical Engineering Research
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    • v.47 no.1
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    • pp.119-126
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    • 2009
  • A district energy system plays very important role to fulfill energy demand in regional areas. This paper diagnoses the necessity of the development of an economical operation system for the efficient operation of district energy plants located in Seoul. The effect anticipated from the use of the optimal operation system is also analyzed. Production and consumption of energy are estimated for the district energy plants at Suseo, Bundang, Ilwon and Jungang located near in Seoul, Korea. The problem is formulated as a mixed integer linear programming(MILP) problem where the objective is to minimize the overall cost of the district energy system. From the results of numerical simulations we can see that the energy efficiency is improved due to the application of the optimal operation conditions provided by the proposed model.

Effect of the Bottom Slope on the Formation of Coastal Front and Shallow-Sea Structure during Cold-Air Outbreak

  • Cheong, Hyeong-Bin;Kim, Young-Seup;Hong, Sung-Keun;Cheong, Hyeong-Bin
    • Journal of the korean society of oceanography
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    • v.32 no.3
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    • pp.93-102
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    • 1997
  • Coastal circulations during the (surface condition of an) idealized cold-air outbreak are numerically investigated with two-dimensional, non-hydrostatic model in which a constant bottom-slope exists. The atmospheric forcing during a cold-air outbreak is incorporated as the surface cooling and the wind stress. When the offshore angle of the wind-stress vector, defined as the angle measured from the alongshore axis, is smaller than 45 degrees, a strong downwelling circulation develops near the coast. A sharp density front, which separates the vertically homogeneous region from the offshore stratified region, is formed near the coast and propagates offshore with time. Onshore side of the density front, small-scale circulation cells which are aligned in the direction perpendicular to the bottom begin to develop as the near-coast homogeneous region broadens. The surface cooling enhances greatly the development of the surface mixed layer by convective motions due to hydrostatic instability. The convective motions reach far below the hydrostatically unstable layer which is attached to the surface. The small-scale circulation cells are appreciably modified by the convetion cell and the density front develops far offshore compared to the case of no surface cooling. As to the effect of the bottom slope, the offshore distance of the density front increases (decreases) as the bottom slope decreases (increases), which results from the fact that the onshore volume-transport (Ekman transport) of the low-density upper seawater remains almost constant when the wind-stress is maintained constant. It is shown that the bottom slope is an essential factor for the formation of both the density front and the alongshore current when the surface cooling is the only forcing.

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Simple Material Budget Modeling for the Paldang Reservoir in the Spring Season (팔당호의 춘계 단순물질수지 모델링)

  • Kong, Dongsoo
    • Journal of Korean Society on Water Environment
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    • v.33 no.6
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    • pp.696-714
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    • 2017
  • Simple material budget models were developed to predict the spring season (March ~ May) water quality for a river-type reservoir Paldang, in the Republic of Korea. These models are available at mixed water bodies whose light intensity is negligible at the bottom. The calculated data from the models fit quite well with field data collected for 30 years, from 1988 to 2017. The apparent settling velocity of total phosphorus was estimated to be $110m\;d^{-1}$. The critical hydraulic load that determines the usability of phosphorus for algal production appeared to be about $2.0m\;d^{-1}$. When a hydraulic load was larger than the critical value, the concentrations of chlorophyll ${\alpha}$ ($Chl.{\alpha}$), chemical oxygen demand (COD), and 5-day biochemical oxygen demand BOD in the reservoir water became insensitive to internal algal reactions. The model analysis showed that the allochthonous COD continued to increase while the allochthonous BOD slightly decreased after 1999. The decrease of allochthonous BOD is due to the expansion of sewage and wastewater treatment plants in the watershed. The increase of allochthonous COD seems to result from the increase in anthropogenic non-point sources as well as the increase in the discharge of natural organic matters due to climate change. Organic matter of algal origin continued to increase until the mid-2000s, but recently it has decreased as the phosphorus concentration has decreased. The COD and BOD of algal origin increased from 35 % and 27 % during 1988 ~ 1994 to 43 % and 40 % during 2000 ~ 2010, respectively, and then decreased to 25 % and 28 % during 2011 ~ 2017.

Estimation of genetic parameters for temperament in Jeju crossbred horses

  • Kim, Nam Young;Son, Jun Kyu;Cho, In Cheol;Shin, Sang Min;Park, Seol Hwa;Seong, Pil Nam;Woo, Jae Hoon;Park, Nam Geon;Park, Hee Bok
    • Asian-Australasian Journal of Animal Sciences
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    • v.31 no.8
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    • pp.1098-1102
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    • 2018
  • Objective: Temperament can be defined as a type of behavioral tendency that appears in a relatively stable manner in responses to various external stimuli over time. The aim of this study was to estimate genetic parameters for the records of temperament testing that are used to improve the temperament of Jeju crossbred (Jeju${\times}$Thoroughbred) horses. Methods: This study was conducted using 205 horses (101 females and 104 males) produced between 2010 and 2015. The experimental animals were imprinted and tamed according to the Manual for Horse Taming and Evaluation for Therapeutic Riding Horses and evaluated according to the categories for temperament testing (gentleness, patience, aggressiveness, sensitivity, and friendliness) between 15 months and 18 months of age. Each category was scored on a five-point linear scale. Genetic parameters for the test categories were analyzed using a multi-trait mixed model with repeated records. The ASReml program was used to analyze the data. Results: The heritability of gentleness, patience, aggressiveness, sensitivity and friendliness ranged from 0.08 to 0.53. The standard errors of estimated heritability ranged from 0.13 to 0.17. The test categories showed high genetic correlations with each other, ranging from 0.96 to 0.99 and high repeatability, ranging from 0.70 to 0.73. Conclusion: The results of this study showed that the test categories had moderate heritability and high genetic correlations, but additional studies may be necessary to use the results for the improvement programs of the temperament of Jeju crossbred horses.

Genome wide association study of fatty acid composition in Duroc swine

  • Viterbo, Vanessa S.;Lopez, Bryan Irvine M.;Kang, Hyunsung;Kim, Hoonseop;Song, Choul-won;Seo, Kang Seok
    • Asian-Australasian Journal of Animal Sciences
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    • v.31 no.8
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    • pp.1127-1133
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    • 2018
  • Objective: Genome wide association study was conducted to identify and validate candidate genes associated with fatty acid composition of pork. Methods: A total of 480 purebreed Duroc pigs were genotyped using IlluminaPorcine60k bead chips while the association test was implemented following genome-wide rapid association using Mixed Model and Regression-Genomic Control (GRAMMAR-GC) approach. Results: A total of 25, 29, and 16 single nucleotide polymorphisms (SNPs) were significantly associated with stearic (18:0), oleic (18:1) and saturated fatty acids (SFA), respectively. Genome wide significant variants were located on the same region of swine chromosome 14 (SSC14) that spanned from 120 to 124 Mb. Top SNP ALGA008191 was located at 5 kb near the stearoyl-CoA desaturase (SCD) gene. This gene is directly involved in desaturation of stearic acid into oleic acid. General relationship of significant SNPs showed high linkage disequilibrium thus genome-wide signals was attributed to SCD gene. However, understanding the role of other genes like elongation of very long chain fatty acids-3 (ELOVL3) located on this chromosomal segment might help in further understanding of metabolism and biosynthesis of fatty acids. Conclusion: Overall, this study provides evidence that validates SCD gene as strong candidate gene associated with fatty acid composition in Duroc pigs. Moreover, this study confirms significant SNPs near ELOVL3 gene.

The Effect of R&D Investment on Local Economies Using Dynamic Panel Estimator in Korea (동태적 Panel 분석을 통한 R&D투자의 지역효과 분석)

  • Yang, Ji-Chung
    • International Area Studies Review
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    • v.18 no.3
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    • pp.175-201
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    • 2014
  • This paper analyses the effect of R&D investment on local economies. R&D investment contributes to the regional local economy by increasing employment and production activity of the investees. The investees may end up with increased productivity, sales and employment. At the regional R&D level, the central government R&D fund and firm self R&D budget will be the source of R&D investment. Further positive effects are inter-related with local industries. This study carried out an empirical analysis on the effect of R&D investment on local economies using Korean panel data after comparing international literatures. The dynamic panel estimator is used to estimate an autoregressive model with lagged dependent variable. Using the Da Silva method, mixed variance-component moving-average error process is estimated and selected. R&D investment is very important factor to improve the productivity of a region and the size of the effect is dependent on the time periods within the Korean economic history.

Genome-wide association study for intramuscular fat content in Chinese Lulai black pigs

  • Wang, Yanping;Ning, Chao;Wang, Cheng;Guo, Jianfeng;Wang, Jiying;Wu, Ying
    • Asian-Australasian Journal of Animal Sciences
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    • v.32 no.5
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    • pp.607-613
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    • 2019
  • Objective: Intramuscular fat (IMF) content plays an important role in meat quality. Identification of single nucleotide polymorphisms (SNPs) and genes related to pig IMF, especially using pig populations with high IMF content variation, can help to establish novel molecular breeding tools for optimizing IMF in pork and unveil the mechanisms that underlie fat metabolism. Methods: We collected muscle samples of 453 Chinese Lulai black pigs, measured IMF content by Soxhlet petroleum-ether extraction method, and genotyped genome-wide SNPs using GeneSeek Genomic Profiler Porcine HD BeadChip. Then a genome-wide association study was performed using a linear mixed model implemented in the GEMMA software. Results: A total of 43 SNPs were identified to be significantly associated with IMF content by the cutoff p<0.001. Among these significant SNPs, the greatest number of SNPs (n = 19) were detected on Chr.9, and two linkage disequilibrium blocks were formed among them. Additionally, 17 significant SNPs are mapped to previously reported quantitative trait loci (QTLs) of IMF and confirmed previous QTLs studies. Forty-two annotated genes centering these significant SNPs were obtained from Ensembl database. Overrepresentation test of pathways and gene ontology (GO) terms revealed some enriched reactome pathways and GO terms, which mainly involved regulation of basic material transport, energy metabolic process and signaling pathway. Conclusion: These findings improve our understanding of the genetic architecture of IMF content in pork and facilitate the follow-up study of fine-mapping genes that influence fat deposition in muscle.

Anti-inflammatory and Anti-gastritis Effect of Sogunjung-tang Mixed Soft Extract (소건중탕 혼합단미연조엑스의 항염증 및 항위염 효과)

  • Kim, Myoung-Jin;Choi, Hye-Min;Nam, Won-Hee;Kim, Se-Jin;Son, Su-Mi;Kim, Jung-Ok
    • Journal of Physiology & Pathology in Korean Medicine
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    • v.35 no.6
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    • pp.235-241
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    • 2021
  • Sogunjung-tang (SGJT) is traditional herbal prescriptions used to treat abdominal pain. In this study, we evaluated the effect on inflammation and gastritis through SGJT formulation development. SGJT composition herbal medicine was boiled in water at 95~100℃ for 3 hours and then concentrated. Sogunjung-tang mix soft extract (STM) was prepared using pharmaceutical excipients such as purified water, sodium benzoate, β-cyclodextrin and CMC-Na. Anti-inflammatory experiment was conducted using STM and lipopolysaccharide (LPS) in RAW 264.7 cells. Cell survival was measured by MTT method. Nitric oxide (NO) was measured using griess reagents, and pro inflammatory cytokines were measured by enzyme-linked immunosorbent assay and RT-PCR. Also, we verified STM validity in acute gastritis using the ICR mouse. STM was administered oral for three days. And 150 mM HCl in 60% ethanol was oral administered 0.5 mL one hour after the last drug administration. Mice were sacrificed 1 hour after 150 mM HCl in 60% ethanol administration. The gastric mucosa was visually observed. STM were not toxic in RAW 264.7 cells. Treatment of STM inhibited the production of NO and inflammatory cytokine at the protein and mRNA levels. Also, in the acute gastritis model with the mouse, the treatment of STM improved gastric mucosal bleeding and edema. In summary, it was confirmed that the treatment of STM exerts anti-inflammatory and anti-gastritis effects. Therefore, we suggest that STM may provide a preclinical evidence for the prevention and treatment of inflammatory and gastritis diseases.