• Title/Summary/Keyword: Method detection limit

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Effect of zero imputation methods for log-transformation of independent variables in logistic regression

  • Seo Young Park
    • Communications for Statistical Applications and Methods
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    • v.31 no.4
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    • pp.409-425
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    • 2024
  • Logistic regression models are commonly used to explain binary health outcome variable using independent variables such as patient characteristics in medical science and public health research. Although there is no distributional assumption required for independent variables in logistic regression, variables with severely right-skewed distribution such as lab values are often log-transformed to achieve symmetry or approximate normality. However, lab values often have zeros due to limit of detection which makes it impossible to apply log-transformation. Therefore, preprocessing to handle zeros in the observation before log-transformation is necessary. In this study, five methods that remove zeros (shift by 1, shift by half of the smallest nonzero, shift by square root of the smallest nonzero, replace zeros with half of the smallest nonzero, replace zeros with the square root of the smallest nonzero) are investigated in logistic regression setting. To evaluate performances of these methods, we performed a simulation study based on randomly generated data from log-normal distribution and logistic regression model. Shift by 1 method has the worst performance, and overall shift by half of the smallest nonzero method, replace zeros with half of the smallest nonzero method, and replace zeros with the square root of the smallest nonzero method showed comparable and stable performances.

A study on selenium quantification using ICP-MS with oxygen reactive gas in soil of Korea

  • Hyun-Young Kim;Young-Kyu Hong;Jin-Wook Kim;Sung-Chul Kim
    • Analytical Science and Technology
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    • v.37 no.4
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    • pp.230-238
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    • 2024
  • This study evaluates a method for quantifying selenium (Se) concentration in soil using inductively coupled plasma mass spectrometry (ICP-MS), with oxygen as a reaction gas. This approach addresses the challenge of detecting low levels of Se in complex soil matrices and aims to effectively minimize interference problems typically associated with argon plasma in traditional ICP-MS analyses. The analytical method utilizes conditions optimized for minimizing spectral interference and were validated by linearity, accuracy, precision, limit of detection (LOD), and limit of quantification (LOQ). The method demonstrated good linearity, high accuracy (90-97 %), and remarkable sensitivity, achieving detection and quantification limits of 0.15 ㎍/kg and 0.44 ㎍/kg, respectively. Developed analysis method for Se in soil was applied to field samples in the different regions of South Korea and Se concentration ranged from 0.11 to 0.52 mg/kg. Correlation analysis between Se concentration and soil properties showed that Se concentration was significantly correlated with cation exchange capacity (CEC) and available phosphorus among other soil properties.

Effect of Pre-treatments on the Content of Heavy Metals in Packaging Paper

  • Jo, Byoung-Muk;Jeong, Myung-Joon
    • Proceedings of the Korea Technical Association of the Pulp and Paper Industry Conference
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    • 2006.06b
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    • pp.465-469
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    • 2006
  • Pre-treatment methods to determine various heavy metal contents in packaging papers were investigated by ICP-ES (Inductively Coupled Plasma Emission Spectrometry) analysis. Pre-treatment methods utilized in this study include dry ashing and decomposition methods ($HNO_{3-}HClO_{4-}HF,\;HNO_{3},\;and\;H_{2}SO_{4-}HNO_{3}$). They were compared with the conventional extraction (water) and migration (3% acetic acid) methods. The five representative heavy metals (Cd, As, Pb, Cr and Hg) were analyzed. For Cd, Hg, and As, the results were below detection limit of the instrument. In case of Cr and Pb, the migration test is considered to be a better method compared to the extraction test, but all pretreated methods showed much higher detection efficiency than the extraction or migration test. However, the detection ratio between the migration test and decomposition methods was different. Among all decomposition methods, the nitric acid - perchloric acid - hydrofluoric acid treatment brought a slightly higher detection value than others, but there was no significant difference among them except sulfuric acid - nitric acid method. Concerning Pb, the sulfuric acid - nitric acid method showed a low detection efficiency compared to other decomposition methods. The sulfuric acid - nitric acid method is, thus, not considered to be a suitable analysis method for Pb in packaging papers.

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Electrochemical Immunosensor Using a Gas Diffusion Layer as an Immobilization Matrix

  • Kim, Yong-Tae;Oh, Kyu-Ha;Kim, Joo-Ho;Kang, Hee-Gyoo;Choi, Jin-Sub
    • Bulletin of the Korean Chemical Society
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    • v.32 no.6
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    • pp.1975-1979
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    • 2011
  • The modification of a gas diffusion layer (GDL), a vital component in polymer electrolyte fuel cells, is described here for use in the electrochemical detection of antibody-antigen biosensors. Compared to other substrates (gold foil and graphite), mouse anti-rHBsAg monoclonal antibody immobilized on gold-coated GDL (G-GDL) detected analytes of goat anti-mouse IgG antibody-ALP using a relatively low potential (-0.0021 V vs. Ag/AgCl 3 M NaCl), indicating that undesired by-reactions during electrochemical sensing should be avoided with G-GDL. The dependency of the signal against the concentration of analytes was observed, demonstrating the possibility of quantitative electrochemical biosensors based on G-GDL substrates. When a sandwich method was employed, target antigens of rHBsAg with a concentration as low as 500 ng/mL were clearly measured. The detection limit of rHBsAg was significantly improved to 10 ng/mL when higher concentrations of the 4-aminophenylphosphate monosodium salt (APP) acting on substrates were used for generating a redox-active product. Additionally, it was shown that a BSA blocking layer was essential in improving the detection limit in the G-GDL biosensor.

Novel islanding detection method for grid connected PV system (계통연계형 태양광발전시스템의 새로운 단독운전 검출기법)

  • Jung, Young-Seok;So, Jung-Hun;Yu, Byung-Gyu;Yu, Gwon-Jong;Choi, Jae-Ho
    • Proceedings of the KIEE Conference
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    • 2005.07b
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    • pp.1705-1707
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    • 2005
  • This paper proposes a novel active frequency drift(AFD) method for the islanding prevention of grid-connected photovoltaic inverter. To detect the islanding phenomenon of grid-connected photovoltaic(PV) inverters concerning about the safety hazards and the damage to other electric equipments, many kinds of anti-islanding methods have been presented. Among them, AFD method using chopping fraction(cf) enables the islanding detection to drift up(or down) the frequency of the voltage during the islanding situation. However, the performance of the conventional AFD methods, which have a certain value of cf only, is inefficient and difficult to design the appropriate cf value analytically to meet the limit of harmonics. In this paper, the periodic chopping fraction based on an AFD method is proposed. This proposed method shows the analytical design value of cf to meet the test procedure of IEEE Std. 929-2000 with the power quality and islanding detection time. To verify the validation of the proposed method, the islanding test results are presented. It is confirmed that the proposed method has not only less harmonic distortion but also good performance of islanding detection compare with the conventional AFD method.

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Comparison of Sampling and Analytical Methods for Determining Airborne Hexavalent Chromium -Limit of Detection, Accuracy and Precision of Analytical Procedures (공기중 6가 크롬 측정 방법 비교 -검출한계, 정확도 및 정밀도-)

  • 신용철;이병규;이지태
    • Journal of Korean Society for Atmospheric Environment
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    • v.18 no.1
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    • pp.39-49
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    • 2002
  • In this study, limits of detection (LOD), accuracy and precision of four sampling/ analytical methods were evaluated and compared for the determination of airborne hexavalent chromium, Cr (VI). The methods include : (1) a combination of the National Institute for Occupational Safety and Health (NIOSH) Method 7600/U. S. Environmental Protection Agency (EPA) Method 218.6 (NIOSH/EPA Method) proposed by Shin and Paik, 2) two impinger methods using 2% NaOH/3% Na$_2$CO$_3$. (3) same as (2) but with 0.02 N NaHCO$_3$absorbing solution, and (4) the Occupational Safety and Health (OSHA) Method ID-215. An ion chromatograph/visible absorbance detector was used for the analysis of Cr (VI) in sample solution. Limit of detection (LOD) , analytical accuracy, and precision were also tested using Cr (VI) spike samples. Recoveries (as index of accuracy) and coefficient of variation (CV) (as a index of precision) were determined. Two-way ANOVA and Turkey's test were performed to test the significance in differences among recoveries and CVs of the methods. In all the methods, the peaks of Cr (VI) were separated sharply on chromatograms and exhibited a strong linearity with Cr (VI) concentrations in solution. The correlation coefficients of calibration curves typically ranged from 0.9997 to 0.9999, and the analytical LODs from 0.025 to 0.1$\mu\textrm{g}$/sample. All the method had good sensitivities and linearities between Cr (VI) levels and peak areas. The accuracies (% mean recoveries) of the methods ranged from 80.1 to 104.2%, while the precisions (pooled coefficient of variation) ranged from 3.16 to 4.43%. The impinger methods showed higher recoveries ( > 95%) than those of the PVC filter methods (the OSHA Method and the NIOSH/EPA Method). It was assumed that Cr (VI) on PVC filter was exposed to air and reduced to trivalent chromium, Cr (III), whereas it was stabilized in alkali solution contained in impinger. Thus, a special treatment of Cr (VI) samples collected on PVC filters may be required.

The Misfire Detection and Intensity Interpretation using Breakdown Voltage Characteristics (브레이크다운전압 특성을 이용한 엔진실화의 검출 및 강도해석)

  • 고용수;박재근;조민석;황재원;채재우
    • Transactions of the Korean Society of Automotive Engineers
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    • v.7 no.6
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    • pp.42-48
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    • 1999
  • Engine misfire causes of the negative effect on exhaust emission such as HC, CO, and NOX . Moreover, it causes damage to the three-way-catalyst(TWC) system permanently. The crankshaft velocity fluctuation(CVF) method has been applied for the real cars as misfire detection system usually, which utilizes the crank angle sensor input to calculate the variation of the crankshaft rotational speed. But this approach has the limit due to the fact that three could be problem under certain engine condition like as deceleration or high speed condition . Therefore the development of new methods are requested today. This study introduced the new method of misfire detection using breakdown voltage(BDV) characteristics between spark plug electrouds.

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Determination of Glyphosate in Whole Blood by HPLC-fluorescence Detection (HPLC 형광검출법에 의한 Glyphosate의 혈중농도 측정)

  • 이상기;김기욱;양자열;인상환;이수연
    • YAKHAK HOEJI
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    • v.45 no.4
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    • pp.347-351
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    • 2001
  • A rapid and sensitive method for the determination of glyphosate, a phosphated amino acid herbicide, in whole blood is presented. After removal of protein, the whale blood was purified by using the anion exchange resin (Dowex 1), and derivatized with 9-fluorenylmethyl chloroformate (FMCL). Derivatized glyphosate from blood sample was injected onto a Whatman partisil 10SAX column and separated with 0.1M phosphate buffer (pH 2.5) and acetonitrile (ratio=3:1). The high performance liquid chromatography-fluorescence detection gave the detection limit of 86pg and linearity of 0.9999 in the range of 0.25 $\mu$g/ml and 25 $\mu$g/ml. The recoveries of glyphosate added to the blood samples were ranged from 75.3% to 100.4% compared to the samples prepared in water. The derivatized glyphosate was stable at various acidity and temperature. This method has been successfully applied to the blood samples of lethal intoxication with the herbicide glyphosate.

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Study on analysis method of herbicide quizalofop-ethyl (제초제 quizalofop-ethyl 분석법에 관한 연구)

  • Kim, Hee-Kwon;Kim, Byeong-Ho;Shim, Jae-Han;Shu, Yong-Tack
    • Korean Journal of Environmental Agriculture
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    • v.17 no.1
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    • pp.22-25
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    • 1998
  • These studies were conducted to develope analysis method of herbicide quizalofop-ethyl by Gas Liquid Chromatography(GLC) and Enzyme-Linked Immunosoment Assay(ELISA) in soil and plant. Quizalofop produced by hydrolysis of quizalofop-ethyl was conjugated with bovine serum albumin(BSA). Quizalofop antibody was developed in rabbits by using BSA conjugation. Antibody titer, incubation temperature, and incubation time was 32,000, $37^{\circ}C$ and 4hours respectively. Minimum detection limit of quizalofop-ethyl by ELISA was 5ppb. Quizalofop-ethyl recovery from soil by ELISA was more than 95percent. Minimum detection limit of quizalofop-ethyl by GLC was 5ppb. Quizalofop-ethyl recovery from soil by GLC was from 89 percent to 100 percent. Minimun detection limit of quizalofop-ethyl by HPLC was 100ppb. Quizalofop-ethyl recovery from soil by HPLC was 89.6 percent.

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Detection of Norovirus in Contaminated Ham by Reverse Transcriptase-PCR and Nested PCR

  • Kim, Seok-Ryel;Kim, Du-Woon;Kwon, Ki-Sung;Hwang, In-Gyun;Oh, Myung-Joo
    • Food Science and Biotechnology
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    • v.17 no.3
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    • pp.651-654
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    • 2008
  • In order to enhance the efficacy of norovirus detection by reverse transcriptase-polymerase chain reaction (RT-PCR) and nested PCR, this study developed a norovirus mRNA concentration method using poly oligo dT-conjugated magnetic beads. An efficient norovirus detection protocol was performed on commercial ham using 2 viral elution buffers (glycine buffer and Tris beef extract buffer) and 2 concentration solutions [polyethylene glycol (PEG) and zirconium hydroxide]. The different approaches were verified by RT-PCR and nested PCR. This method was performed on ham in less than 8 hr by artificial inoculation of serial dilutions of the virus ranging from 1,000 to 1 RT-PCR unit/mL. The viral extraction and concentration method had 10-fold higher sensitivity using the combination of Tris beef extract buffer and PEG as compared to glycine buffer and zirconium hydroxide. This method proved that RT-PCR and nested PCR have the sensitive ability to detect norovirus in commercial ham, in that norovirus was successfully detected in artificially contaminated samples at a detection level as low as 1-10 RT-PCR unit/mL. Overall, such a detection limit suggests this protocol is both quick and efficient in terms of its potential use for detecting norovirus in meat products.