Browse > Article

Detection of Norovirus in Contaminated Ham by Reverse Transcriptase-PCR and Nested PCR  

Kim, Seok-Ryel (Division of Food Science and Aqualife Medicine, Chonnam National University)
Kim, Du-Woon (Division of Food Science and Aqualife Medicine, Chonnam National University)
Kwon, Ki-Sung (Korea Food & Drug Administration)
Hwang, In-Gyun (Korea Food & Drug Administration)
Oh, Myung-Joo (Division of Food Science and Aqualife Medicine, Chonnam National University)
Publication Information
Food Science and Biotechnology / v.17, no.3, 2008 , pp. 651-654 More about this Journal
Abstract
In order to enhance the efficacy of norovirus detection by reverse transcriptase-polymerase chain reaction (RT-PCR) and nested PCR, this study developed a norovirus mRNA concentration method using poly oligo dT-conjugated magnetic beads. An efficient norovirus detection protocol was performed on commercial ham using 2 viral elution buffers (glycine buffer and Tris beef extract buffer) and 2 concentration solutions [polyethylene glycol (PEG) and zirconium hydroxide]. The different approaches were verified by RT-PCR and nested PCR. This method was performed on ham in less than 8 hr by artificial inoculation of serial dilutions of the virus ranging from 1,000 to 1 RT-PCR unit/mL. The viral extraction and concentration method had 10-fold higher sensitivity using the combination of Tris beef extract buffer and PEG as compared to glycine buffer and zirconium hydroxide. This method proved that RT-PCR and nested PCR have the sensitive ability to detect norovirus in commercial ham, in that norovirus was successfully detected in artificially contaminated samples at a detection level as low as 1-10 RT-PCR unit/mL. Overall, such a detection limit suggests this protocol is both quick and efficient in terms of its potential use for detecting norovirus in meat products.
Keywords
norovirus; reverse transcriptase-polymerase chain reaction (RT-PCR); ham; magnetic bead;
Citations & Related Records
Times Cited By KSCI : 3  (Citation Analysis)
Times Cited By Web Of Science : 1  (Related Records In Web of Science)
Times Cited By SCOPUS : 1
연도 인용수 순위
1 Koopmans M, Bonsdorff C, Vinje J, Medici D, Monroe S. Foodborne viruses. FEMS Microbiol. Rev. 26: 187-205 (2002)   DOI
2 Fong TT, Griffin DW, Lipp EK. Molecular assays for targeting human and bovine enteric viruses in coastal waters and their application for library-independent source tracking. Appl. Environ. Microb. 71: 2070-2078 (2005)   DOI   ScienceOn
3 Kingsley DH, Richards GP. Rapid and efficient extraction method for reverse transcription-PCR detection of hepatitis A and Norwalklike viruses in shellfish. Appl. Environ. Microb. 67: 4152-4157 (2001)   DOI   ScienceOn
4 Guyader FSL, Neill FH, Dubois E, Bon F, Loisy F, Kohli E, Pommepuy M, Atmar RL. A semiquantitative approach to estimate Norwalk-like virus contamination of oysters implicated in an outbreak. Int. J. Food Microbiol. 87: 107-112 (2003)   DOI   ScienceOn
5 Schwab KJ, De Leon R, Sobsey MD. Immunoaffinity concentration and purification of waterborne enteric viruses for detection by reverse transcriptase PCR. Appl. Environ. Microb. 62: 2086-2094 (1996)
6 Green KY, Chanock RM, Kapikian AZ. Human caliciviruses. pp. 841-874. In: Fields Virology. Fileds BN, Knipe DM, Howley PM, Chanock RM, Monath TP, Melnick JL, Roizman B, Straus SE (eds). Lippincott Williams & Wilkins, Philadelphia, PA, USA (2001)
7 D'Souza DH, Jaykus LA. Zirconium hydroxide effectively immobilizes and concentrates human enteric viruses. Lett. Appl. Microbiol. 35: 414-418 (2002)   DOI   ScienceOn
8 Boxman IL, Tilburg JJ, te Loeke NA, Vennema H, de Boer E, Koopmans M. An efficient and rapid method for recovery of norovirus from food associated with outbreaks of gastroenteritis. J. Food Protect. 70: 504-508 (2007)   DOI
9 Lipp EK, Kurz R, Vincent R, Rodriguez-Palacios C, Farrah SR, Rose JB. The effects of seasonal variability and weather on microbial fecal pollution and enteric pathogens in a subtropical estuary. Estuaries 24: 266-276 (2001)   DOI   ScienceOn
10 Gerba CP, Goyal SM. Detection and occurrence of enteric viruses in shellfish. J. Food Protect. 41: 743-754 (1978)   DOI
11 Lucore LA, Cullison MA, Jaykus LA. Immobilization with metal hydroxides as a means to concentrate foodborne bacteria for detection by cultural and molecular methods. Appl. Environ. Microb. 66: 1769-1776 (2002)   DOI   ScienceOn
12 Daniels NA, Bergmire-Sweat DA, Schwab KJ, Hendricks KA, Reddy S, Rowe SM, Fankhauser RL, Monroe SS, Atmar RL, Glass RI, Mead P. A foodborne outbreak of gastroenteritis associated with Norwalk-like viruses: First molecular trace back to deli sandwiches contaminated during preparation. J. Infect. Dis. 181: 1467-1470 (2000)   DOI   ScienceOn
13 Estes MK, Prasad BV, Atmar RL. Noroviruses everywhere: Has something changed? Curr. Opin. Infect. Dis. 19: 467-474 (2006)   DOI   ScienceOn
14 Butot S, Putallaz T, Sánchez G. Procedure for rapid concentration and detection of enteric viruses from berries and vegetables. Appl. Environ. Microb. 73: 186-192 (2007)   DOI   ScienceOn
15 Afliger D, Gilgen M, Luthy J, Hubner P. Seminested RT-PCR systems for small round structured viruses and detection of enteric viruses in seafood. Int. J. Food Microbiol. 37: 27-36 (1997)   DOI   ScienceOn
16 Dubois E, Hennechart C, Merle G, Burger C, Hmila N, Ruelle S, Perelle S, Ferre V. Detection and quantification by real-time RTPCR of hepatitis A virus from inoculated tap waters, salad vegetables, and soft fruits: Characterization of the method performances. Int. J. Food Microbiol. 117: 141-149 (2007)   DOI   ScienceOn
17 Ha S, Woo GJ, Kwak HS, Hwang IG, Choi WS. Simplified procedure for detection of poliovirus and norovirus in oysters. Korean J. Food Sci. Technol. 37: 1018-1023 (2005)   과학기술학회마을
18 Liu J, Wu Q, Kou X. Development of a virus concentration method and its application for the detection of noroviruses in drinking water in China. J. Microbiol. 45: 48-52 (2007)   과학기술학회마을
19 Lewis GD, Metcalf TG. Polyethylene glycol precipitation for recovery of pathogenic viruses, including hepatitis A virus and human rotavirus from oyster, water, and sediment samples. Appl. Environ. Microb. 54: 1983-1988 (1988)
20 Lee SY, Jang KI, Woo GJ, Kwak HS, Kim KY. Development of protocol for the effective detection of feline calicivirus as norovirus surrogate in oyster and lettuce. Korean J. Food Sci. Technol. 39: 71- 76 (2007)   과학기술학회마을