• Title/Summary/Keyword: Marina

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Draft genome sequence of Zhongshania marina DSW25-10T isolated from seawater (해수에서 분리된 Zhongshania marina DSW25-10T 의 유전체 서열분석)

  • Oh, Ji-Sung;Roh, Dong-Hyun
    • Korean Journal of Microbiology
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    • v.54 no.4
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    • pp.480-482
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    • 2018
  • The draft genome sequencing for Zhongshania marina $DSW25-10^T$, isolated from deep seawater of East Sea in Korea, was performed using Illumina HiSeq platform. As a result, the draft genome was comprised of a total length of approximately 4.08 Mbp with G + C content of 49.0%, and included a total of 3,702 protein-coding genes, 3 rRNA genes, 39 tRNA genes, 4 non-coding RNA genes, and 36 pseudogenes. In addition, the metabolic pathways of aliphatic and aromatic compounds were identified. In light of these metabolic pathways, Zhongshania marina $DSW25-10^T$ is expected to be a useful bioremediation resource.

Seasonal Variation Characteristics of Zostera marina L. in HAENAM SAGUMI on the Southern Coast of Korea (해남 사구미 연안 거머리말(Zostera marina L.)의 계절특성)

  • Ok, Jae Seung;Lee, Sang Yong;Shin, Kyung Hoon;Kim, Hi Joong
    • Korean Journal of Ecology and Environment
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    • v.46 no.4
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    • pp.513-523
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    • 2013
  • This ecological study was conducted to analyze seasonal variation characteristics of Zostera marina at HAENAM SAGUMI on the Southern Coast of Korea. Environmental characteristics, plant morphological characteristics, shoot density, biomass, and leaf production were monitored from August 2008 to March 2011. Zostera marina occurred in the subtidal zone from 0 to 2.5 m below the mean low water level. Water temperature showed a clear annual pattern, with increase in spring and summer, and decreases in fall and winter. Irradiance showed seasonal variation, even though daily weather condition has short-term variation in the incident irradiation. Plant morphological characteristics, shoot density, biomass, and leaf production showed clear seasonal variation. Seasonal variation in the above biomass of Zostera marina was mainly caused by changes in shoot length. We found that there are correlations between environmental characteristics (water temperature, irradiation) and the growth of Zostera marina. There is stronger correlation between water temperature and the growth of Zostera marina, compared to the correlation between irradiation and the growth of Zostera marina. In particular, the growth of Zostera marina is inhibited by both higher and lower water temperature.

Changes in Physicochemical Properties of Spergularia marina Griseb by Blanching (Blanching에 따른 세발나물의 이화학적 특성 변화)

  • Lee, Jae-Joon;Jung, Hae-Ok
    • Food Science and Preservation
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    • v.19 no.6
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    • pp.866-872
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    • 2012
  • This study was conducted to investigate the changes in physicochemical properties of Spergularia marina Griseb by blanching. The proximate composition, free sugar, free amiao acid, organic acid, vitamin and mineral composition of raw and blanching Spergularia marina Griseb were compared. After blanching treatment, the moisture and carbohydrate contents of Spergularia marina Griseb increased, but the crude protein, crude fat and crude ash contents decreased. Total free sugar content decreased by 62.50% compared with raw Spergularia marina Griseb after blanching, and the reduction of galactose was the largest in free sugars. The raw and blanched Spergularia marina Griseb contained all the essential amino acids, except tryptophan. The total amino acid and essential amino acid contents were reduced by blanching, but the essential amino acid ratios of the raw and blanched Spergularia marina Griseb were similar. The amounts of all the detected organic acids were reduced by blanching, except acetic acid. Spergularia marina Griseb was found to contain high levels of vitamin C, vitamin E, and minerals, but these were reduced by blanching. These results showed that most of the nutrients contained by Spergularia marina Griseb are decrease by blanching. Therefore, the blanching conditions that can reduce nutrient loss of Spergularia marina Griseb must be established.

A Study of Antimicrobial Effect of Zostera marina Extracts (잘피(Zostera marina) 추출물의 항균효과에 대한 연구)

  • Lee, So-Yeon;Kim, Bo-Ae;Shin, Dong-Chul;Park, Kwan-Soon;Yang, Jae-Chan
    • Journal of the Korean Applied Science and Technology
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    • v.33 no.2
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    • pp.225-231
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    • 2016
  • This study was conducted to investigate the antimicrobial activities of ethanol extracts (70%, v/v) from Whole, Root and Leaf stem part of dried Zostera marina. In order to use Zostera marina extract as a basic material of cosmetic component. The extracts of Zostera marina conducted an antimicrobial activity against Staphylococcus aureus, Staphylococcus epidermidis, Escherichia coli, Pseudomonas aeruginosa, Candida albicans, Propionibacterium acnes by disc diffusion method and measure clear zone. As a result, clear zone(mm) of Staphylococcus epidermidis was confirmed at $13.00{\pm}0.50mm$ and Staphylococcus aureus, Propionibacterium acnes, Pseudomonas aeruginosa have measured $11.75{\pm}0.25mm$, $12.00{\pm}0.50mm$, $12.25{\pm}0.25mm$ from Root extract part of Zostera marina. A Zostera marina extract is expectied to have antimicrobial effects.

Germination Rate of Zostera marina and Phyllospadix japonicus Related to Environmental Factors (환경요인에 따른 거머리말(Zostera marina)과 게바다말(Phyllospadix japonicus)의 발아율)

  • Park, Jung-Im;Lee, Kun-Seop;Son, Min Ho
    • Korean Journal of Environmental Biology
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    • v.30 no.3
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    • pp.280-285
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    • 2012
  • We investigated germination rate of Zostera marina and Phyllospadix japonicus, which are the most two abundant seagrass species of Korea, in related to light, salinity and temperature. Light had no significant effect on Z. marina germination, but it promoted P. japonicus germination. The highest germination of Z. marina appeared in 0 psu, and that of P. japonicus appeared in 15 psu. The optimum water temperatures for germination of Z. marina and P. japonicus were $5^{\circ}C$ and $15^{\circ}C$, respectively. These differences of optimum germination requirements of Z. marina and P. japonicus were probably caused by the difference of the habitat environment of the two seagrass species. Since few data exist concerning germination of Korean seagrasses, this study provides valuable information for the conservation of seagrass habitats in Korea.

Growth Kinetics on the Nutrient of the Harmful Algae Chattonella marina and C. ovata (Raphidophyceae) Isolated from the South Sea of Korea (한국 남해산 유해조류 Chattonella marina와 C. ovata (Raphidophyceae)의 영양염에 대한 성장동력학)

  • Noh, Il-Hyeon;Oh, Seok-Jin;Park, Jong-Sick;Shin, Hyeon-Ho;Yoon, Yang-Ho
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.42 no.6
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    • pp.674-682
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    • 2009
  • Recently, the occurrence of harmful algae blooms from the Chattonella group has been increasing and expanding in the southern and western seas of Korea. We investigated the relationship between growth kinetics and nutrients in the harmful algae Chattonella marina and Chattonella ovata of the South Sea, Korea. As a result; high concentrations of ammonium ($30\;{\mu}M$ and above) was not effective to the growth of C. ovata, while C. marina displayed good growth at concentration of $100\;{\mu}M$. The half-saturation constant ($K_s$) of C. marina for ammonium ($2.51\;{\mu}M$), nitrate ($5.36\;{\mu}M$) and phosphate ($0.75\;{\mu}M$) was higher than C. ovata (1.85, 4.01, and $0.61\;{\mu}M$, respectively). This indicates that C. ovata can achieve higher cell densities than C. marina under lower nutrient conditions. These $K_s$ values were comparatively higher than those of diatoms and other flagellates previously reported. Therefore, our results indicate that the growth of C. marina and C. ovata is less adapted to lower nutrient environments than other competition species, such as Skeletonema costatum and Cochlodinium polykrikoides.

Initial Design of Offshore Floating Marina System (해상 부유식 마리나의 초기설계)

  • Chung H.;Oh T. W.;Namgoong S.;Kim S. B.;Jo C. H.
    • Proceedings of the Korea Committee for Ocean Resources and Engineering Conference
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    • 2004.11a
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    • pp.108-113
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    • 2004
  • Marinas are often located in prime port side locations. hi Korea these locations are already developed and reclamation of the existing properties poses many difficulties and financial overhead. Also, to develop a standard marina in Korea with tide ranges up to 6 meters would require considerable dredging and reclamation works needing long lead times and large SOC costs. The Ocean Space's floating marina system is an independent offshore floating static level system that does not require fixed location breakwaters. The entire marina floats with the tide giving a calm consistent berthing condition for vessels irrespective of the surrounding tide and weather conditions. The floating marina system provides also for all of functions needed to marina comprising a breakwater to protect the vessels, the pontoon system to house the vessels, a dub house and retail tourism precinct, fuel reservoir and associated support facilities in a turn key self contained unit. The modular nature of the system will mean that initial demand can be met with simple units and then further modules can be added quite easily without the related expansion difficulties or infrastructure. This paper contains the main characteristics of the floating marina system and tire design process of the structure. The mooring, motion & stability analysis, the overall & local structural design and the mooring & anchor system design are introduced in this paper.

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Growth and ingestion rates of heterotrophic dinoflagellates and a ciliate on the mixotrophic dinoflagellate Biecheleria cincta

  • Yoo, Yeong Du;Yoon, Eun Young;Lee, Kyung Ha;Kang, Nam Seon;Jeong, Hae Jin
    • ALGAE
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    • v.28 no.4
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    • pp.343-354
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    • 2013
  • To explore the interactions between the mixotrophic dinoflagellate Biecheleria cincta (previously Woloszynskia cincta) and heterotrophic protists, we investigated whether the common heterotrophic dinoflagellates Gyrodinium dominans, Gyrodinium moestrupii, Gyrodinium spirale, Oxyrrhis marina, and Polykrikos kofoidii, and the ciliate Strobilidium sp. were able to feed on B. cincta. We also measured growth and ingestion rates of O. marina and Strobilidium sp. on B. cincta as a function of prey concentration. In addition, these rates were measured for other predators at single prey concentrations at which the growth and ingestion rates of O. marina and Strobilidium sp. were saturated. All grazers tested in the present study were able to feed on B. cincta. B. cincta clearly supported positive growth of O. marina, G. dominans, and Strobilidium sp., but it did not support that of G. moestrupii, G. spirale, and P. kofoidii. The maximum growth rates of Strobilidium sp. and O. marina on B. cincta (0.91 and 0.49 $d^{-1}$, respectively) were much higher than that of G. dominans (0.07 $d^{-1}$). With increasing the mean prey concentration, the specific growth rates of O. marina and Strobilidium sp. on B. cincta increased, but either became saturated or slowly increased. The maximum ingestion rate of Strobilidium sp. (1.60 ng C $predator^{-1}\;d^{-1}$) was much higher than that of P. kofoidii and O. marina (0.55 and 0.34 ng C $predator^{-1}\;d^{-1}$) on B. cincta. The results of the present study suggest that O. marina and Strobilidium sp. are effective protistan grazers of B. cincta.

Feeding by common heterotrophic protists on the phototrophic dinoflagellate Biecheleriopsis adriatica (Suessiaceae) compared to that of other suessioid dinoflagellates

  • Kang, Hee Chang;Jeong, Hae Jin;Jang, Se Hyeon;Lee, Kyung Ha
    • ALGAE
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    • v.34 no.2
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    • pp.127-140
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    • 2019
  • The species in the dinoflagellate order Suessiales have 5-24 latitudinal paraplate series and include many fossil and extant species. There have been a few studies on the ecophysiology of the phototrophic species Biecheleriopsis adriatica, and no study on its predators. Thus, we explored the feeding occurrence by common heterotrophic protists on B. adriatica and the growth and ingestion rates of the heterotrophic dinoflagellate Oxyrrhis marina on B. adriatica BATY06 as a function of prey concentration. The common heterotrophic dinoflagellates Aduncodinium glandula, O. marina, Gyrodinium dominans, Gyrodinium moestrupii, Luciella masanensis, Pfiesteria piscicida, and Oblea rotunda and two naked ciliates Strombidinopsis sp. and Pelagostrobilidium sp. were able to feed on B. adriatica, but the heterotrophic dinoflagellate Polykrikos kofoidii was not. However, B. adriatica supported the positive growth of O. marina, but did not support that of G. dominans and O. rotunda. With increasing prey concentrations, the growth and ingestion rates of O. marina on B. adriatica increased and became saturated. The maximum growth rate of O. marina on B. adriatica was $0.162d^{-1}$. Furthermore, the maximum ingestion rate of O. marina on B. adriatica was $0.2ng\;C\;predator^{-1}\;d^{-1}$ ($2.0cells\;predator^{-1}\;d^{-1}$). In the order Suessiales, the feeding occurrence by common heterotrophic protists on B. adriatica is similar to that on Effrenium voratum and Biecheleria cincta, but different from that on Yihiella yeosuensis. However, the growth and ingestion rates of O. marina on B. adriatica are considerably lower than those on E. voratum and B. cincta, but higher than those on Y. yeosuensis. Therefore, B. adriatica may be less preferred prey for O. marina than E. voratum and B. cincta, but more preferred prey than Y. yeosuensis.

Water Flow Estimation using Roughness Coefficient in a Seagrass (Zostera marina L.) Bed (조도계수를 이용한 거머리말 해초지의 조석류에 대한 수치실험)

  • Oh, Tae-Gun;Kim, Chang-Gil;Kim, Jeong-Bae;Lee, Sang-Yong
    • Ocean and Polar Research
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    • v.30 no.3
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    • pp.239-247
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    • 2008
  • Spatial distribution of water flow generated by tidal current was investigated within a Zostera marina(seagrass) bed in Wonpo Bay. Water flow and elevation were observed during the seagrass growing season. The spatial distribution of water flow was numerically estimated using roughness coefficient. Water flow inside the seagrass meadow was compared with the observed values. Velocity in Zostera marina vegetated areas was approximately $25{\sim}84%$ lower than that of unvegetated areas. However, flow direction was the same. Intensity of the flood tide diminished appreciably within the seagrass bed, while its pattern was also affected. It is therefore concluded that water flow is influenced by Zostera marina meadows.