• Title/Summary/Keyword: Mapping system

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Analysis of the Genome Sequence of Strain GiC-126 of Gloeostereum incarnatum with Genetic Linkage Map

  • Jiang, Wan-Zhu;Yao, Fang-Jie;Fang, Ming;Lu, Li-Xin;Zhang, You-Min;Wang, Peng;Meng, Jing-Jing;Lu, Jia;Ma, Xiao-Xu;He, Qi;Shao, Kai-Sheng;Khan, Asif Ali;Wei, Yun-Hui
    • Mycobiology
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    • v.49 no.4
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    • pp.406-420
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    • 2021
  • Gloeostereum incarnatum has edible and medicinal value and was first cultivated and domesticated in China. We sequenced the G. incarnatum monokaryotic strain GiC-126 on an Illumina HiSeq X Ten system and obtained a 34.52-Mb genome assembly sequence that encoded 16,895 predicted genes. We combined the GiC-126 genome with the published genome of G. incarnatum strain CCMJ2665 to construct a genetic linkage map (GiC-126 genome) that had 10 linkage groups (LGs), and the 15 assembly sequences of CCMJ2665 were integrated into 8 LGs. We identified 1912 simple sequence repeat (SSR) loci and detected 700 genes containing 768 SSRs in the genome; 65 and 100 of them were annotated with gene ontology (GO) terms and KEGG pathways, respectively. Carbohydrate-active enzymes (CAZymes) were identified in 20 fungal genomes and annotated; among them, 144 CAZymes were annotated in the GiC-126 genome. The A mating-type locus (MAT-A) of G. incarnatum was located on scaffold885 at 38.9 cM of LG1 and was flanked by two homeodomain (HD1) genes, mip and beta-fg. Fourteen segregation distortion markers were detected in the genetic linkage map, all of which were skewed toward the parent GiC-126. They formed three segregation distortion regions (SDR1-SDR3), and 22 predictive genes were found in scaffold1920 where three segregation distortion markers were located in SDR1. In this study, we corrected and updated the genomic information of G. incarnatum. Our results will provide a theoretical basis for fine gene mapping, functional gene cloning, and genetic breeding the follow-up of G. incarnatum.

Ensemble Deep Network for Dense Vehicle Detection in Large Image

  • Yu, Jae-Hyoung;Han, Youngjoon;Kim, JongKuk;Hahn, Hernsoo
    • Journal of the Korea Society of Computer and Information
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    • v.26 no.1
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    • pp.45-55
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    • 2021
  • This paper has proposed an algorithm that detecting for dense small vehicle in large image efficiently. It is consisted of two Ensemble Deep-Learning Network algorithms based on Coarse to Fine method. The system can detect vehicle exactly on selected sub image. In the Coarse step, it can make Voting Space using the result of various Deep-Learning Network individually. To select sub-region, it makes Voting Map by to combine each Voting Space. In the Fine step, the sub-region selected in the Coarse step is transferred to final Deep-Learning Network. The sub-region can be defined by using dynamic windows. In this paper, pre-defined mapping table has used to define dynamic windows for perspective road image. Identity judgment of vehicle moving on each sub-region is determined by closest center point of bottom of the detected vehicle's box information. And it is tracked by vehicle's box information on the continuous images. The proposed algorithm has evaluated for performance of detection and cost in real time using day and night images captured by CCTV on the road.

A Study on the Data Cleaning and Standardization of National Ecosystem Survey in Korea (전국자연환경조사 데이터 정제와 표준화 방안 연구)

  • Kwon, Yong-Su;Song, Kyohong;Kim, Mokyoung;Kim, Kidong
    • Korean Journal of Ecology and Environment
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    • v.53 no.4
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    • pp.380-389
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    • 2020
  • Research on diagnosing and predicting the response of ecosystems caused by environmental changes such as artificial disturbance and climate change is emerging as the most important issue of biodiversity and ecosystem researches. This study aims to clean, standardize, and provide the results of National Ecosystem Survey which should be considered fundamentally in diagnosing and predicting ecosystem changes in the form of dataset. To refine and clean the dataset we developed a simple verification program based on the fifth National Ecosystem Survey Guideline and applied that program to the data from the second (1997~2005), third (2006~2013) and fourth (2014~2018) National Ecosystem Survey. Data quality control processes were implemented including (1) standardization of terminology, (2) similar data table integration, (3) unnecessary attribute and error elimination, (4) unification of different input items, (5) data arrangement in codes, and (6) code mapping for input items. These approaches and methods are the first attempt propose an option for ecological data standardization in Korea. The standardized dataset of National Ecosystem Survey in Korea will be easily accessible, reusable for both researchers and public. In addition, we expect it will contribute to the establishment of diverse environmental policies concerning environmental assessments, habitat conservation, prediction of endangered species distribution and ecological risks due to climate change. The dataset through this study is open freely online via EcoBank (nie-ecobank.kr) which is the first ecological information portal system in Korea developed by National Institute of Ecology.

Characteristics of KOMPSAT-3A Key Image Quality Parameters During Normal Operation Phase (정상운영기간동안의 KOMPSAT-3A호 주요 영상 품질 인자별 특성)

  • Seo, DooChun;Kim, Hyun-Ho;Jung, JaeHun;Lee, DongHan
    • Korean Journal of Remote Sensing
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    • v.36 no.6_2
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    • pp.1493-1507
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    • 2020
  • The LEOP Cal/Val (Launch and Early Operation Phase Calibration/Validation) was carried out during 6 months after KOMPSAT-3A (KOMPSAT-3A Korea Multi-Purpose Satellite-3A) was launched in March 2015. After LEOP Cal/Val was successfully completed, high resolution KOMPSAT-3A has been successfully distributing to users over the past 8 years. The sub-meter high-resolution satellite image data obtained from KOMPSAT-3A is used as basic data for qualitative and quantitative information extraction in various fields such as mapping, GIS (Geographic Information System), and national land management, etc. The KARI (Korea Aerospace Research Institute) periodically checks and manages the quality of KOMPSAT-3A's product and the characteristics of satellite hardware to ensure the accuracy and reliability of information extracted from satellite data of KOMPSAT-3A. To minimize the deterioration of image quality due to aging of satellite hardware, payload and attitude sensors of KOMPSAT-3A, continuous improvement of image quality has been carried out. In this paper, the Cal/Val work-flow defined in the KOMPSAT-3A development phase was illustrated for the period of before and after the launch. The MTF, SNR, and location accuracy are the key parameters to estimate image quality and the methods of the measurements of each parameter are also described in this work. On the basis of defined quality parameters, the performance was evaluated and measured during the period of after LEOP Cal/Val. The current status and characteristics of MTF, SNR, and location accuracy of KOMPSAT-3A from 2016 to May 2020 were described as well.

3D Reconstruction of Pipe-type Underground Facility Based on Stereo Images and Reference Data (스테레오 영상과 기준데이터를 활용한 관로형 지하시설물 3차원 형상 복원)

  • Cheon, Jangwoo;Lee, Impyeong
    • Korean Journal of Remote Sensing
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    • v.38 no.6_1
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    • pp.1515-1526
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    • 2022
  • Image-based 3D reconstruction is to restore the shape and color of real-world objects, and image sensors mounted on mobile platforms are used for positioning and mapping purposes in indoor and outdoor environments. Due to the increase in accidents in underground space, the location accuracy problem of underground spatial information has been raised. Image-based location estimation studies have been conducted with the advantage of being able to determine the 3D location and simultaneously identify internal damage from image data acquired from the inside of pipeline-type underground facilities. In this study, we studied 3D reconstruction based on the images acquired inside the pipe-type underground facility and reference data. An unmanned mobile system equipped with a stereo camera was used to acquire data and image data within a pipe-type underground facility where reference data were placed at the entrance and exit. Using the acquired image and reference data, the pipe-type underground facility is reconstructed to a geo-referenced 3D shape. The accuracy of the 3D reconstruction result was verified by location and length. It was confirmed that the location was determined with an accuracy of 20 to 60 cm and the length was estimated with an accuracy of about 20 cm. Using the image-based 3D reconstruction method, the position and line-shape of the pipe-type underground facility will be effectively updated.

Crossplot Interpretation of Electrical Resistivity and Seismic Velocity Values for Mapping Weak Zones in Levees (제방의 취약구간 파악을 위한 전기비저항과 탄성파속도의 교차출력 해석)

  • Cho, Kyoung-Seo;Kim, Jeong-In;Kim, Jong-Woo;Kim, Ji-Soo
    • The Journal of Engineering Geology
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    • v.31 no.4
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    • pp.507-522
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    • 2021
  • Specific survey objectives often cannot be met using only one geophysical method, as each method's results are influenced by the specific physical properties of subsurface materials. In particular, areas susceptible to geological hazards require investigation using more than one method in order to reduce risks to life and property. Instead of analyzing the results from each method separately, this work develops a four-quadrant criterion for classifying areas of levees as safe or weak. The assessment is based on statistically determined thresholds of seismic velocity (P-wave velocity from seismic refraction and S-wave velocity from multichannel analysis of surface waves) and electrical resistivity. Thresholds are determined by subtracting the standard deviation from the mean during performance testing of this correlation technique applied to model data of four horizontal and inclined fracture zones. Compared with results from the crossplot of resistivity and P-wave velocity, crossplot analysis using resistivity and S-wave velocity data provides more reliable information on the soil type, ground stiffness, and lithological characteristics of the levee system. A loose and sandy zone (represented by low S-wave velocity and high resistivity) falling within the second quadrant is interpreted to be a weak zone. This interpretation is well supported by the N values from standard penetrating test for the central core.

A Study on the Development items of Korean Marine GIS Software Based on S-100 Universal Hydrographic Standard (S-100 표준 기반 해양 GIS 소프트웨어 국산화 개발 방향에 관한 연구)

  • LEE, Sang-Min;CHOI, Tae-Seok;KIM, Jae-Myung;CHOI, Yun-Soo
    • Journal of the Korean Association of Geographic Information Studies
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    • v.25 no.3
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    • pp.17-28
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    • 2022
  • This study is to develop the direction of the development of the next-generation mapping of marine information required to develop a base of the utilization localization of maritime production tools. The GIS data-processing products and technologies currently used in the Korea's marine sector depend on external applications which is renewal costs, technical updates, and unreflected characteristics. Meanwhile, the S-100 standard, the next generation hydrographic data model that complements S-57's problems in marine GIS data processing, was adopted as a new marine data standard. This study aims to present the current status and problems of marine GIS technology in Korea and to suggest the development direction of GIS software based on the next generation hydrogrphic data model S-100 standard of IHO(International Hydrographic Organization). S-100-based marine GIS localization technology development and industrial ecosystem development research is expected to scientific decision-making on policy issues that occur with other countries such as marine territory management and development and use of marine resources.

Trends in disaster safety research in Korea: Focusing on the journal papers of the departments related to disaster prevention and safety engineering

  • Kim, Byungkyu;You, Beom-Jong;Shim, Hyoung-Seop
    • Journal of the Korea Society of Computer and Information
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    • v.27 no.10
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    • pp.43-57
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    • 2022
  • In this paper, we propose a method of analyzing research papers published by researchers belonging to university departments in the field of disaster & safety for the scientometric analysis of the research status in the field of disaster safety. In order to conduct analysis research, the dataset constructed in previous studies was newly improved and utilized. In detail, for research papers of authors belonging to the disaster prevention and safety engineering type department of domestic universities, institution identification, cited journal identification of references, department type classification, disaster safety type classification, researcher major information, KSIC(Korean Standard Industrial Classification) mapping information was reflected in the experimental data. The proposed method has a difference from previous studies in the field of disaster & safety and data set based on related keyword searches. As a result of the analysis, the type and regional distribution of organizations belonging to the department of disaster prevention and safety engineering, the composition of co-authored department types, the researchers' majors, the status of disaster safety types and standard industry classification, the status of citations in academic journals, and major keywords were identified in detail. In addition, various co-occurrence networks were created and visualized for each analysis unit to identify key connections. The research results will be used to identify and recommend major organizations and information by disaster type for the establishment of an intelligent crisis warning system. In order to provide comprehensive and constant analysis information in the future, it is necessary to expand the analysis scope and automate the identification and classification process for data set construction.

Literature Review on Health Effect Surveys of Residents in Environmentally Contaminated Areas in South Korea from 1997 to 2021 (한국 환경오염 취약지역 주민 건강영향조사 문헌고찰(1997~2021))

  • Kyung-Hwa Choi;Sujung Kim;Hyun A Jang;Dahee Han;Ho-Jang Kwon;Yong Min Cho
    • Journal of Environmental Health Sciences
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    • v.49 no.3
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    • pp.134-148
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    • 2023
  • Background: The conducting of health effect surveys (HESs) in environmentally contaminated vulnerable areas (ECVAs) by the central and local governments has been increasing apace with the increase in demand for HESs since the Environmental Health Act was enacted in South Korea in 2008. Objectives: This study aimed to review the HESs of residents in ECVAs conducted in South Korea. Methods: An analysis was performed on 125 reports obtained from the Environment Digital Library, PRISM, and local government websites after selecting from 803 projects obtained as ECVAs from the Korea ON-Line E-Procurement System (1997~2021), National Institute Environment Research (2000~2021), and Korea Environmental Industry and Technology Institute (2009~2021). The reports were classified by background (residents' demand, HES, and more), research design (cross-sectional study, cohort, ecological study, and panel), pollution source (abandoned metal mine (AMM), industrial complex (IC), and more), and assessment method of exposure and health effects. The survey area was converted into administrative district codes for geographical mapping. Results: There were 37, 34, 18, and 10 cases associated with AMM, IC, waste incinerators, and coal-fired power plants, respectively. Most of the studies conducted were cross-sectional studies and ecological studies. The proportion of epidemiological investigations by residents' demand showed an increase from 0.0% to 8.9% for the central government while decreasing from 16.7% to 14.3% for local governments after 2008 compared to before 2008. HESs increased at both the central and local government levels since 2014. For the evaluation method, 365 environmental hazards, 319 health outcomes, and 302 biological markers were investigated, with the most commonly investigated items being metals, cancer, and blood metals. Conclusions: HESs of residents in ECVAs in South Korea have been continuously developed both quantitatively and qualitatively. Future improvements are expected, and systematic review and classification of the HESs is warranted.

Comparison Among Sensor Modeling Methods in High-Resolution Satellite Imagery (고해상도 위성영상의 센서모형과 방법 비교)

  • Kim, Eui Myoung;Lee, Suk Kun
    • KSCE Journal of Civil and Environmental Engineering Research
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    • v.26 no.6D
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    • pp.1025-1032
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    • 2006
  • Sensor modeling of high-resolution satellites is a prerequisite procedure for mapping and GIS applications. Sensor models, describing the geometric relationship between scene and object, are divided into two main categories, which are rigorous and approximate sensor models. A rigorous model is based on the actual geometry of the image formation process, involving internal and external characteristics of the implemented sensor. However, approximate models require neither a comprehensive understanding of imaging geometry nor the internal and external characteristics of the imaging sensor, which has gathered a great interest within photogrammetric communities. This paper described a comparison between rigorous and various approximate sensor models that have been used to determine three-dimensional positions, and proposed the appropriate sensor model in terms of the satellite imagery usage. Through the case study of using IKONOS satellite scenes, rigorous and approximate sensor models have been compared and evaluated for the positional accuracy in terms of acquirable number of ground controls. Bias compensated RFM(Rational Function Model) turned out to be the best among compared approximate sensor models, both modified parallel projection and parallel-perspective model were able to be modelled with a small number of controls. Also affine transformation, one of the approximate sensor models, can be used to determine the planimetric position of high-resolution satellites and perform image registration between scenes.