• Title/Summary/Keyword: Major damage

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Formation of DNA-protein Cross-links Mediated by C1'-oxidized Abasic Lesion in Mouse Embryonic Fibroblast Cell-free Extracts

  • Sung, Jung-Suk;Park, In-Kook
    • Animal cells and systems
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    • v.9 no.2
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    • pp.79-85
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    • 2005
  • Oxidized abasic residues arise as a major class of DNA damage by a variety of agents involving free radical attack and oxidation of deoxyribose sugar components. 2-deoxyribonolactone (dL) is a C1'-oxidized abasic lesion implicated in DNA strand scission, mutagenesis, and covalent DNA-protein cross-link (DPC). We show here that mammalian cell-free extract give rise to stable DPC formation that is specifically mediated by dL residue. When a duplex DNA containing dL at the site-specific position was incubated with cell-free extracts of Po ${\beta}-proficient$ and -deficient mouse embryonic fibroblast cells, the formation of major dL-mediated DPC was dependent on the presence of DNA polymerase (Pol) ${\beta}$. Formation of dL-specific DPC was also observed with histones and FEN1 nuclease, although the reactivity in forming dL-mediated DPC was significantly higher with Pol ${\beta}$ than with histones or FEN1. DNA repair assay with a defined DPC revealed that the dL lesion once cross-linked with Pol ${\beta}$ was resistant to nucleotide excision repair activity of cell-free extract. Analysis of nucleotide excision repair utilizing a model DNA substrate containing a (6-4) photoproduct suggested that excision process for DPC was inhibited because of DNA single-strand incision at 5' of the lesion. Consequently DPC mediated by dL lesion may not be readily repaired by DNA excision repair pathway but instead function as unusual DNA damage causing a prolonged DNA strand break and trapping of the major base excision repair enzyme.

Climate Change and Socioeconomic Change Effects on the Four Major Rivers: An Economic Appraisal (기후변화와 사회경제요인 변화에 따른 4대강의 물부족 피해 추정)

  • Lee, Yoon
    • Journal of Environmental Policy
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    • v.11 no.4
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    • pp.107-130
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    • 2012
  • Economic analysis of climate change in the Korean peninsula has been conducted in the four major river basins. Although climate change impacts can vary in many terms, typically flood damages from the increase of precipitation and drought from rainless, this research only focused on effects of altering precipitation due to the lack of information and depth-damage functional form in Korea. This research also considered a gamma function of 5 % failure to deal with uncertainty issues in water resources. For the detailed analysis, time different discount rates have been used for short, mid, and long period, viz., 2.76%, 1.45%, and 0.62%, respectively. Over all effects of climate change on four major riverbasins can be summarized as no short period damage except the Han river basin. In the Han river basin, rapid increases of residential water use lead short term water shortage.

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Gymnaster koraiensis and its major components, 3,5-di-O-caffeoylquinic acid and gymnasterkoreayne B, reduce oxidative damage induced by tert-butyl hydroperoxide or acetaminophen in HepG2 cells

  • Jho, Eun Hye;Kang, Kyungsu;Oidovsambuu, Sarangerel;Lee, Eun Ha;Jung, Sang Hoon;Shin, Il-Shik;Nho, Chu Won
    • BMB Reports
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    • v.46 no.10
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    • pp.513-518
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    • 2013
  • We investigated the protective effects of Gymnaster koraiensis against oxidative stress-induced hepatic cell damage. We used two different cytotoxicity models, i.e., the administration of tert-butyl hydroperoxide (t-BHP) and acetaminophen, in HepG2 cells to evaluate the protective effects of G. koraiensis. The ethyl acetate (EA) fraction of G. koraiensis and its major compound, 3,5-di-O-caffeoylquinic acid (DCQA), exerted protective effects in the t-BHP-induced liver cytotoxicity model. The EA fraction and DCQA ameliorated t-BHP-induced reductions in GSH levels and exhibited free radical scavenging activity. The EA fraction and DCQA also significantly reduced t-BHP-induced DNA damage in HepG2 cells. Furthermore, the hexane fraction of G. koraiensis and its major compound, gymnasterkoreayne B (GKB), exerted strong hepatoprotection in the acetaminophen-induced cytotoxicity model. CYP 3A4 enzyme activity was strongly inhibited by the extract, hexane fraction, and GKB. The hexane fraction and GKB ameliorated acetaminophen-induced reductions in GSH levels and protected against cell death.

The Study on the Disputes Originated from the Seeds of Radish, Chinese Cabage, and Pepper (무, 배추 및 고추종자의 분쟁사례연구)

  • Park, Tae-Young;Yoon, Wha-Mo;Min, Byung-Hoon
    • The Journal of Natural Sciences
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    • v.8 no.2
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    • pp.153-158
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    • 1996
  • The Number of the disputes originated from vegetable seeds in 1968-1970 under 'Seed and Seedling Law for Agricultural Product)' was 177.: Poor germination was the major one (26% of total disputes), followed by inferior seeds(24.3%), imported seeds(23.7%), and off-type plant(15.6%).During 1976-1995, under 'Administrative Law for Seed and Seedling' the number of disputes originated from vegetable seeds was 175.: 53 in radish, 19 in Chinese cabbage, and 17 in pepper. The type of dispute originated from radish seeds was premature bolting(26%), differences in sowing data(21%), poor purity(19%), micronutrient deficiency(9%), root cracking and branching(9%), poor germination(4%), and damage by disease(2%). In Chinese cabbage, micronutrient deficiency was the major one(27%), followed by poor germination(21%), incomplete head formation(16%), damage by disease(16%), poor purity(10%), and bolting(10%). In pepper, poor fruit setting was the major one(6%), followed by malformed fruits(5%), damage by disease(3%), purity(2%), and poor germination(1%).

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An Evaluation of the Impact of Ammonium Nitrate Explosion Occurred in Beirut Port (베이루트항에서 발생한 질산암모늄 폭발에 의한 영향 평가)

  • Yong-Kyun Yoon
    • Explosives and Blasting
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    • v.41 no.4
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    • pp.1-8
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    • 2023
  • On August 4, 2020, 2750 tons of ammonium nitrate stored in a storage warehouse at the Port of Beirut exploded. This explosion is said to be the largest ammonium nitrate explosion ever. By applying the TNT equivalency method, TNT equivalent amount corresponding to the explosion energy of 2750 tons of ammonium nitrate was calculated, and it is found to be 856 tons. Overpressure and impulse were calculated in a range up to 3600 m from the blast using the Kingery-Bulmash explosion parameter calculator tool. As the distance from the explosion center increases, the overpressure and impulse decrease exponentially, but the overpressure decreases more significantly, showing that overpressure is more affected by distance than the impact. As a result of applying the damage criteria to evaluate the effects of overpressure and impulse on the structure, the critical distances at which partial collapse, major damage, and minor damage to the structure occur are found to be approximately 500, 800, and 2200 m from the center of the explosion, respectively. The probit function was applied to evaluate the probability of damage to structures and human body. The points where the probability of collapse, major damage, minor damage, and breakage of window-panes to structures are greater than 50% are found to be approximately 500, 810, 2200, and 3200 m, respectively. For people within 200 m from the center of the explosion, the probability of death due to lung damage is more than 99%, and the 50% probability of eardrum rupture is approximately 300 m. The points with a 100% probability of death due to skull rupture and whole body impact due to whole body displacement are evaluated to be 300 and 100 m, respectively.

Analysis of Subsurface Geological Structures and Geohazard Pertinent to Fault-damage in the Busan Metropolitan City (부산시 도심지의 지하 지질구조와 단층손상과 관련된 지질위험도 분석)

  • Son, Moon;Lee, Son-Kap;Kim, Jong-Sun;Kim, In-Soo;Lee, Kun
    • Economic and Environmental Geology
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    • v.40 no.1 s.182
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    • pp.87-101
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    • 2007
  • A variety of informations obtained from satellite image, digital elevation relief map (DEM), borehole logging, televiewer, geophysical prospecting, etc were synthetically analyzed to investigate subsurface geological and structural characteristics and to evaluate geohazard pertinent to fault-damage in the Busan metropolitan city. It is revealed that the geology is composed of the Cretaceous andesitic$\sim$dacitic volcanics, gabbro, and granitoid and that at least three major faults including the Dongrae fault are developed in the study area. Based on characteristics of topography, fault-fractured zone, and isobath maps of the Quaternary sediments and weathered residuals of the basement, the Dongrae fault is decreased in its width and fracturing intensity of damaged zone from south toward north, and the fault is segmented around the area between the Seomyeon and Yangieong junctions. Meanwhile, we drew a geohazard sectional map using the five major parameters that significantly suggest damage intensity of basement by fault, i.e. distance from fault core, TCR, RQD, uniaxial rock strength, and seismic velocity of S wave. The map is evaluated as a suitable method to express the geological and structural characteristics and fault-damaged intensity of basement in the study area. It is, thus, concluded that the proposed method can contribute to complement and amplify the capability of the present evaluation system of rock mass.

Incompatible deformation and damage evolution of mixed strata specimens containing a circular hole

  • Yang, Shuo;Li, Yuanhai;Chen, Miao;Liu, Jinshan
    • Geomechanics and Engineering
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    • v.20 no.5
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    • pp.461-474
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    • 2020
  • Analysing the incompatible deformation and damage evolution around the tunnels in mixed strata is significant for evaluating the tunnel stability, as well as the interaction between the support system and the surrounding rock mass. To investigate this issue, confined compression tests were conducted on upper-soft and lower-hard strata specimens containing a circular hole using a rock testing system, the physical mechanical properties were then investigated. Then, the incompatible deformation and failure modes of the specimens were analysed based on the digital speckle correlation method (DSCM) and Acoustic Emission (AE) data. Finally, numerical simulations were conducted to explore the damage evolution of the mixed strata. The results indicate that at low inclination angles, the deformation and v-shaped notches inside the hole are controlled by the structure plane. Progressive spalling failure occurs at the sidewalls along the structure plane in soft rock. But the transmission of the loading force between the soft rock and hard rock are different in local. At high inclination angles, v-shaped notches are approximately perpendicular to the structure plane, and the soft and hard rock bear common loads. Incompatible deformation between the soft rock and hard rock controls the failure process. At inclination angles of 0°, 30° and 90°, incompatible deformations are closely related to rock damage. At 60°, incompatible deformations and rock damage are discordant due that the soft rock and hard rock alternately bears the major loads during the failure process. The failure trend and modes of the numerical results agree very well with those observed in the experimental results. As the inclination angles increase, the proportion of the shear or tensile damage exhibits a nonlinear increase or decrease, suggesting that the inclination angle of mixed strata may promote shear damage and restrain tensile damage.

The Protective Effects of Astragali Radix Against UV Induced Cellular Damage in Human Keratinocytes (황기의 자외선에 의한 세포 손상을 막는 보호 효과)

  • Lee, Jin-Young;Park, Hye-Yoon;Yeom, Myeong-Hun;Kim, Duck-Hee;Kim, Han-Kon
    • Korean Journal of Pharmacognosy
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    • v.39 no.4
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    • pp.300-304
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    • 2008
  • The root of Astragalus membranaceus Bunge (Leguminosae) has been used in the Korean oriental medicine for strengthening the vital energy. UV irradiation has been suggested as a major cause of photo aging in skin. In order to investigate protective effects against UV induced cellular damage, Astragali Radix was extracted with 70% ethanol and dissolved in DMSO. The protective effect was detected by MTT assay, LDH assay, and Comet assay in immortalized human keratinocyte cell line, HaCaT cell system after UV irradiation. Astragli Radix 70% EtOH extract reduced UV induced cellular damage in cell survival, membrane integrity and DNA damage.

Probabilistic Model of Service Life to Evaluate Damage Tolerance of Composite Structure (복합재 항공구조물의 손상허용평가를 위한 운항수명의 확률적 모델)

  • A.스튜어트;A.우샤코프;심재열;황인희
    • Proceedings of the Korean Society For Composite Materials Conference
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    • 2000.11a
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    • pp.245-248
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    • 2000
  • Modern aircraft composite structures are designed using a damage tolerance philosophy. This design philosophy envisions sufficient strength and structural integrity of the aircraft to sustain major damage and to avoid catastrophic failure. The only reasonable way to treat on the same basis all the conditions and uncertainties participating in the design of damage tolerant composite aircraft structures is to use the probability-based approach. Therefore, the model has been developed to assess the probability of structural failure (POSF) and associated risk taking into account the random mechanical loads, random temperature-humidity conditions, conditions causing damages, as well as structural strength variations due to intrinsic strength scatter, manufacturing defects, operational damages, temperature-humidity conditions. The model enables engineers to establish the relationship between static/residual strength safety margins, production quality control requirements, in-service inspection resolution and criteria, and POSF. This make possible to estimate the cost associated with the mentioned factors and to use this cost as overall criterion. The methodology has been programmed into software.

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Baicalein and Baicalin from the Radix of Scutellaria baicalensis Georgi Inhibits Oxidative DNA Damage and Apoptosis via its Antioxidant Activity

  • Garcia, Nellie Ann S.;Jeong, Hyung-Jin
    • Korean Journal of Plant Resources
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    • v.22 no.6
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    • pp.489-497
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    • 2009
  • In this study, we evaluated and compared the protective effects of two major constituents, baicalein and baicalin, against oxidative DNA and cell damages caused by hydroxyl radical. Antioxidant properties were evaluated using DPPH and hydroxyl radicals scavenging assays and $Fe^{2+}$ chelating assay. ${\varphi}X$ 174 RFI plasmid DNA and intracellular DNA migration assay were used to evaluate the protective effect against oxidative DNA damage. Also, MTT and lipid peroxidation assays were used to evaluate their protective effects against oxidative cell damage. Both baicalein and baicalin prevented intracellular DNA and cells from oxidative damage caused by hydroxyl radical via antioxidant activities. Baicalein demonstrated a stronger antioxidant activity in scavenging DPPH radicals and chelating $Fe^{2+}$ while baicalin scavenged hydroxyl radicals more efficiently. The differences in the level of baicalein and baicalin pose a different pathological pathway for each. The antioxidant activity of baicalin was due to its ability to scavenge hydroxyl radical whilst baicalein was a stronger $Fe^{2+}$ chelator. Further investigation to compare the molecular mechanisms of antitumor activities of baicalein and baicalin is vital to anticancer research.