• Fisheries and Aquatic Sciences
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• 제17권1호
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• pp.1-11
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• 2014

The Kenyan aquaculture sector is broadly categorized into freshwater aquaculture and mariculture. Whereas freshwater aquaculture has recorded significant progress over the last decade, the mariculture sector has yet to be fully exploited. The Kenyan aquaculture industry has seen slow growth for decades until recently, when the government-funded Economic Stimulus Program increased fish farming nationwide. Thus far, the program has facilitated the alleviation of poverty, spurred regional development, and led to increased commercial thinking among Kenyan fish farmers. Indeed, national aquaculture production grew from 1,000 MT/y in 2000 (equivalent to 1% of national fish production) to 12,000 MT/y, representing 7% of the national harvest, in 2010. The production is projected to hit 20,000 MT/y, representing 10% of total production and valued at USD 22.5 million over the next 5 years. The dominant aquaculture systems in Kenya include earthen and lined ponds, dams, and tanks distributed across the country. The most commonly farmed fish species are Nile tilapia Oreochromis niloticus, which accounts for about 75% of production, followed by African catfish Clarias gariepinus, which contributes about 21% of aquaculture production. Other species include common carp Cyprinus carpio, rainbow trout Oncorhynchus mykiss, koi carp Cyprinus carpio carpio, and goldfish Carassius auratus. Recently, Kenyan researchers have begun culturing native fish species such as Labeo victorianus and Labeo cylindricus at the National Aquaculture Research Development and Training Centre in Sagana. Apart from limited knowledge of modern aquaculture technology, the Kenyan aquaculture sector still suffers from an inadequate supply of certified quality seed fish and feed, incomprehensive aquaculture policy, and low funding for research. Glaring opportunities in the Kenyan aquaculture industry include the production of live fish food, e.g., Artemia, daphnia and rotifers, marine fish and shellfish larviculture; seaweed farming; cage culture; integrated fish farming; culture of indigenous fish species; and investment in the fish feed industry.

• 한국수산과학회지
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• 제35권5호
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• pp.490-496
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• 2002

한국, 미국, 일본지역에 서식하는 연어에서 추출한 genomic DNA를 이용하여 연어의 mtDNA NDI 영역, D-loop 영역, growth hormone, IGF-I, MCH2, histone H3의 염기서열을 분석하여, 최적의 primer를 제작하여 PCR을 실시한 결과, mtDNA NDI 영역은 Ks12, Ks24, As11, As14, Js13, Js15에서 증폭된 DNA를 확인하였으며, D-loop 영역, growth hormone, IGF-I, histone H3, MCH2에서는 모든 시료에서 증폭된 DNA를 확인하였다. DGGE 분석의 결과, mtDNA NDI 영역 (AF133701, 449-880), D-loop 영역 (AF125518, 11-514)과 growth hormone (AFO05927, 181-530)에서는 이형다양성을 확인하였으며, IGF-I (AF063216, 962-1461)과 MCH2 (M27281, 70-593)는 모두 이형다양성이 나타났으나, histone H3 (AF017147, 7-487)는 모두 이형다양성이 관찰되지 않았다. 그리고 real time PCR 관찰 결과는 DGGE의 결과와 유사한 점을 찾을 수 없었지만, real time PCR도 각각의 유전자에 따라 서로 다른 DNA 생성 패턴을 보여 DNA 변이를 쉽게 구별하는데 보조적인 도움이 되었다.

• Fisheries and Aquatic Sciences
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• 제12권1호
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• pp.44-48
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• 2009

Nucleotide sequences of about 500 bp from the 5' end of mitochondrial (mt) DNA Cytochrome Oxidase I (COI) were analyzed to estimate the genetic variation between wild and cultured populations of the ascidian Halocynthia roretzi from two sites along the coast of Korea. A total of 25 haplotypes were defined by 21 variable nucleotide sites in the examined COI region. Genetic diversity (haplotype diversity and nucleotide divergence) of wild populations was higher than that of the cultured population. These data suggest that reduced genetic variation in the cultured population may have results from bottleneck effect caused by the use of a limited number of parental stock and pooling of gametes for fertilization. Pairwise population $F_{ST}$ estimates inferred that wild and cultured populations were genetically distinct. The combined results suggest that sequence polymorphism in the COI region would be preferable for estimating the genetic diversity of ascidian populations.

• 한국환경과학회지
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• 제20권4호
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• pp.551-554
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• 2011

The production of the sharp-toothed eel by commercial catch off waters of Korea is annually declined after 1978. This study was carried out to obtain the stock management of the sharp-toothed eel using the PCR-aided RFLP method. The mtDNA COI gene was amplified using species-specific primers and PCR product was observed to 700 bp. Amplified DNA fragments were treated with six kinds of restriction enzymes (BaeHI, EcoRI, PstI, Ksp22, HinfI and HaeIII). The treatment of HaeIII showed a distinct PCR product between Yeosu/Jinhae/Jeju/Goseoung and Jangheung/Haenam populations that were observed from 300 to 400 bp in reference to 100 bp molecular marker. However, DNA fragment within populations had an identical pattern. The phylogenetic homology is 82% between two populations inferred from RFLP PCR product pattern using NTsysPC ver. 2.1. The use of HaeIII plays an important role in discriminating populations. It is thought that adults after over-wintering in the southern part of Jeju migrate to the Yeosu, Jinhae and Goseoung regions to spawn instead of to southwestern waters. Individuals within populations showed a relatively active genetic mixing and migration regardless of geography. However, the genetic ancestor of Jangheung and Haenam populations is appeared to be more adjacent to China or Japan than Jeju.

• Molecules and Cells
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• 제23권3호
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• pp.379-390
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• 2007

We sequenced and characterized the complete mitochondrial genome of the Japanese fish tapeworm D. nihonkaiense. The genome is a circular-DNA molecule of 13607 bp (one nucleotide shorter than that of D. latum mtDNA) containing 12 protein-coding genes (lacking atp8), 22 tRNA genes and two rRNA genes. Gene order and genome content are identical to those of the other cestodes reported thus far, including its congener D. latum. The only exception is Hymenolepis diminuta in which the positions of trnS2 and trnL1 are switched. We tested a PCR-based molecular assay designed to rapidly and accurately differentiate between D. nihonkaiense and D. latum using species-specific primers based on a comparison of their mtDNA sequences. We found the PCR-based system to be very reliable and specific, and suggest that PCR-based identification methods using mtDNA sequences could contribute to the study of the epidemiology and larval ecology of Diphyllobothrium species.

• 한국석유지질학회지
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• 제12권1호
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• pp.27-33
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• 2006

북한의 서한만 분지는 일일 생산량 450 배럴의 원유가 생산되고 있어 석유부존 가능성이 확인되었고, 중국에서 큰 유전중 하나인 발해만 유전지대와 지리적으로 근접해 있어 대규모 매장 가능성도 있다. 지금까지 북한의 석유탐사 및 투자 현황을 살펴보면, 탐사가 진행중인 곳은 3개 지역으로 서한만 B&C 광구 (스웨덴 Taurus사), 북부 서한만 및 육상 안주분지 (캐나다 SOCO사), 동한만 광구 (호주 Beach Petroleum사) 등이다. 상기 이외의 해저에는 원유가 부존할 만한 분지가 존재하지 않으며, 길주-명천 지구대 등 일부 육상 지역에서는 원유가 발견된 곳도 있으나 경제성이 없는 것으로 추정된다. 지금까지 밝혀진 북한 서한만의 지질은 중국의 발해만과 유사하다. 후기 원생대와 초기 고생대에 생성된 기반암 위에는 최대 $6,000{\sim}10,000\;m$ 두께의 중생대 탄산염암 및 퇴적암과 $4,000{\sim}5,000\;m$ 두께의 신생대 퇴적암이 집적되어 있다. 근원암은 3,000 m 이상되는 쥬라기 및 $1,000{\sim}2,000\;m$ 두께의 백악기 흑색 셰일 그리고 수천 m 두께의 중생대 이전의 탄산염암으로 구성되어 있다. 저류층은 높은 공극률을 가진 중생대부터 신생대에 퇴적된 사암과 중생대전에 균열된 탄산염암이다. 원유 트랩은 배사구조, 단층구조, 파묻혀 있는 언덕 (buried hill) 그리고 층서형 트랩 형태다. 따라서 서한만에서의 퇴적층들은 다양한 형태의 근원암을 가지며 또한 공극률과 투수율이 높고, 많은 단층에 의한 이동경로를 가지게 되므로, 사암으로 이루어진 석유 저장지만 발견하면 석유를 생산할 수 있을 것으로 추정된다. 연안국의 200해리 배타적 경제수역 설정 등 해양관할권 확대가 주류를 이루는 새로운 국제해양질서가 구축되고 있는 상황과 동일한 해역을 대상으로 하는 남북한 해양개발의 인접성 등을 감안할 때, 실리주의적 세계의 변화에 공동으로 대처하고 남북한 상호 경제발전을 도모하기 위해서는 남북한 해양과학기술 협력교류의 활성화와 새로운 첨단 해양기술의 공동 연구 개발 둥 남북 상호간의 능동적이고 적극적인 협력자세가 무엇보다 필요하다고 생각된다. 또한 한반도 주변해양에서 남북한 각기 독자적인 해양관리 및 해양산업의 전개보다는 양국 공동협력에 의해 주변국의 한민족 공동체가 참여하는 방안이 시급한 과제라고 판단된다.

• 한국발생생물학회지:발생과생식
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• 제23권4호
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• pp.385-390
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• 2019

Upon gene inactivation in animal models, the zebrafish (Danio rerio) has become a useful model organism for many reasons, including the fact that it is amenable to various forms of genetic manipulation. Genome editing is a type of genetic engineering in which DNA is inserted, deleted, modified, or replaced in the genome of a living organism. Mainly, CRISPR (clustered regularly interspaced short palindromic repeats) Cas9 (CRISPR-associated protein 9) is a technology that enables geneticists to edit parts of the genome. In this study, we utilized this technology to generate an mmp15b mutant by using zebrafish as an animal model. MMP15 is the membrane-type MMP (MT-MMP) which is a recently identified matrix metalloproteinase (MMP) capable of degrading all kinds of extracellular matrix proteins as well as numerous bioactive molecules. Although the newly-established mmp15b zebrafish mutant didn't exhibit morphological phenotypes in the developing embryos, it might be further utilized to understand the role of MMP15 in liver-related diseases, such as liver fibrosis, and associated pathogeneses in humans.

• Molecular & Cellular Toxicology
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• 제3권4호
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• pp.267-272
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• 2007

Environmental and anthropogenic changes affect the health and stability of marine ecosystem. In this study we aimed to identify molecular biomarkers for ecotoxicological pollutants risk assessment in the rockfish (Sebastes schlegeli). We designed primers based on conserved sequences by multiple alignments of target genes from related species, and cloned the partial cDNAs of cytochrome P450 (CYP1A1), glutathione S-transferase (GST), metallothionein (MT), superoxide dismutase (SOD), ubiquitin (UB), vitellogenin (VTG) and $\beta$-actin by reverse transcription polymerase chain reaction (RT-PCR) from S. schlegeli. Northern blot results indicated that these six genes expressions were significantly induced by benzo[a]pyrene (BaP, 1 ${\mu}M$) and that the level of each of their transcripts increased in BaP-exposed rockfish in a time-dependent manner. This study suggests that transcriptional changes in these six genes may be used for monitoring environmental exposure to polycyclic aromatic hydrocarbons (PAHs).

• 수산해양기술연구
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• 제44권2호
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• pp.129-140
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• 2008

This study was performed to estimate biomass and to provide management plan through population ecological characteristics, including growth parameters, survival rate, instantaneous coefficient of natural and fishing mortalities, and age at first capture of hen clam, Mactra chinensis, in the Dong-li self-regulatory community of Busan. The von Bertalanffy growth parameters estimated from a non-linear regression were $SH_{\infty}=86.24mm$, K=0.12/year, and = -1.37year. Survival rate(s) of the hen clam was 0.515. The instantaneous coefficients of natural mortality(M) was estimated to be 0.232/year and fishing mortality(F) 0.432/year for hen clam. The current biomass of the hen clam in the study area was estimated to be 713mt and the acceptable biological catch(ABC) was estimated under various harvest strategies based on $F_{0.1}$ and $F_{40%}$.

• 수산해양기술연구
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• 제54권1호
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• pp.38-53
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• 2018

The purpose of this study is to estimate potential yield (PY) for Korean west coast fisheries using the holistic production method (HPM). HPM involves the use of surplus production models to apply input data of catch and standardized fishing efforts. HPM compared the estimated parameters of the surplus production from four different models: the Fox model, CYP model, ASPIC model, and maximum entropy model. The PY estimates ranged from 174,232 metric tons (mt) using the CYP model to 238,088 mt using the maximum entropy model. The highest coefficient of determination ($R^2$), the lowest root mean square error (RMSE), and the lowest Theil's U statistic (U) for Korean west coast fisheries were obtained from the maximum entropy model. The maximum entropy model showed relatively better fits of data, indicating that the maximum entropy model is statistically more stable and accurate than other models. The estimate from the maximum entropy model is regarded as a more reasonable estimate of PY. The quality of input data should be improved for the future study of PY to obtain more reliable estimates.