• Title/Summary/Keyword: M-N domains

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The Epitope Recognized by Monoclonal Antibody 2B6 in the B/C Domains of Classical Swine Fever Virus Glycoprotein E2 Affects Viral Binding to Hyperimmune Sera and Replication

  • Tong, Chao;Chen, Ning;Liao, Xun;Xie, Wenqi;Li, Dejiang;Li, Xiaoliang;Fang, Weihuan
    • Journal of Microbiology and Biotechnology
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    • v.25 no.4
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    • pp.537-546
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    • 2015
  • Classical swine fever (CSF) is a highly contagious disease of pigs caused by CSF virus (CSFV). E2 is the major viral envelope protein of immune dominance that induces neutralizing antibodies and confers protection against CSFV infection. The B/C domains of E2 are variable among CSFV isolates, which could affect immunogenicity and binding to antibodies. We attempted to characterize the epitope recognized by a monoclonal antibody 2B6 (mAb-2B6) raised against the E2 B/C domains of the vaccine C-strain and to examine if mutations in the epitope region would affect antibody binding and viral neutralization. The epitope specific for mAb-2B6 recognition is linear, spanning five residues 774DGXNP778 in the B/C domains. The residue N777 is indispensable for the specificity. The epitope exists only in group 1 strains, but not in those of group 2. The recombinant viruses containing individual mutations on the epitope region lost the reactivity to mAb-2B6. The mutant virus RecC-N777S had low replication potential, about 10-fold decrease in the yield of progeny virus particles, whereas the mutant virus RecC-P778A reverted to proline upon continuous passaging. The mutations on the mAb-2B6 epitope region did not affect neutralization by anti-C-strain polyclonal sera from pigs. Deletion from aa774 covering the mAb-2B6 epitope, but not that from aa781, also affected binding with the polyclonal antibodies from vaccinated pigs, although the major binding region for the vaccinated antibodies is aa690-773.

Development of ELISA System for Screening of Specific Binding Inhibitors for Src Homology (SH)2 Domain and Phosphotyrosine Interactions

  • Lee, Sang-Seop;Lee, Kyung-Im;Yoo, Ji-Yun;Jeong, Moon-Jin;Park, Young-Mee;Kwon, Byoung-Mog;Bae, Yun-Soo;Han, Mi-Young
    • BMB Reports
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    • v.34 no.6
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    • pp.537-543
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    • 2001
  • In the present study, an in vitro ELISA system to assess the interaction between Src homology (SH)2 domains and phosphotyrosine that contain peptides was established using purified GST-conjugated SH2 proteins and synthetic biotinylated phosphotyrosine that contain oligopeptides. The SH2 domains bound the relevant phosphopeptides that were immobilized in the streptavidin-coated microtiter plate in a highly specific and dose-dependent manner. The epidermal growth factor receptor (EGFR)-, T antigen (T Ag)-, and platelet-derived growth factor receptor (PDGFR)-derived phosphopeptides interacted with the growth factor receptor binding protein (Grb)2/SH2, Lck/SH2, and phosphatidyl inositol 3-kinase (PI3K) p85/SH2, respectively. No cross-reactions were observed. Competitive inhibition experiments showed that a short phosphopeptide of only four amino acids was long enough to determine the binding specificity. Optimal concentrations of the GST-SH2 fusion protein and phosphopeptide in this new ELISA system for screening the binding blockers were chosen at 2nM and 500nM, respectively. When two candidate compounds were tested in our ELISA system, they specifically inhibited the Lck/SH2 and/or p85/SH2 binding to the relevant phosphopeptides. Our results indicate that this ELISA system could be used as an easy screening method for the discovery of specific binding blockers of protein-protein interactions via SH2 domains.

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Study on the Surface Magnetic Domain Structure of Thin-Gauged 3% Si-Fe Strips using Scanning Electron Microscopy with Polarization Analysis

  • Chai, K.H.;Heo, N.-H.;Na, J.g.;Lee, S.R.;Woo, j.s.
    • Journal of Magnetics
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    • v.3 no.2
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    • pp.44-48
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    • 1998
  • Scanning Electron Microscopy with Polarization Analysis (SEMPA) was used to image the surface magnetic domain structure of the 100 ${\mu}{\textrm}{m}$ thick 3% Si-Fe sheet. The thin-gauged 3% Si-Fe strips with magnetic induction ($B_{10}$) from 1.98 to 1.57 Tesla were prepared via conventional metallurgical processes including melting, hot-and cold-rolling, intermediate annealing and final annealing. Using SEMPA, it was observed that the $B_{10}$ (1.98 T) Tesla sample was almost composed of 180$^{\circ}$ stripe domains which are parallel to rolling direction. On the other hand the 3% Si-Fe sheet with $B_{10}$ (1.57 T) Tesla was composed of large 180$^{\circ}$stripe domains that are slanted about 30$^{\circ}$to the rolling direction and complex magnetic domain structures like tree and zigzag pattern. The 180$^{\circ}$stripe domains, which covered a major part of the sample, had (110)<001> Goss texture parallel to the rolling direction. The domain walls between 180$^{\circ}$stripe domains were the conventional Bloch type walls. On the other hand, the 90$^{\circ}$domains, which covered minor part on edge of the sample, were observed in (200) grains. The domain walls between 90$^{\circ}$domains were the Neel type walls. In high magnification, the elliptical singularity at the Neel walls was clearly observed.

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THE ${\bar{\partial}}$-PROBLEM WITH SUPPORT CONDITIONS AND PSEUDOCONVEXITY OF GENERAL ORDER IN KÄHLER MANIFOLDS

  • Saber, Sayed
    • Journal of the Korean Mathematical Society
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    • v.53 no.6
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    • pp.1211-1223
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    • 2016
  • Let M be an n-dimensional $K{\ddot{a}}hler$ manifold with positive holomorphic bisectional curvature and let ${\Omega}{\Subset}M$ be a pseudoconvex domain of order $n-q$, $1{\leq}q{\leq}n$, with $C^2$ smooth boundary. Then, we study the (weighted) $\bar{\partial}$-equation with support conditions in ${\Omega}$ and the closed range property of ${\bar{\partial}}$ on ${\Omega}$. Applications to the ${\bar{\partial}}$-closed extensions from the boundary are given. In particular, for q = 1, we prove that there exists a number ${\ell}_0$ > 0 such that the ${\bar{\partial}}$-Neumann problem and the Bergman projection are regular in the Sobolev space $W^{\ell}({\Omega})$ for ${\ell}$ < ${\ell}_0$.

PREPARATION, PHYSICAL PROPERTIES AND MODEL ANALYSIS OF LINEAR HOMOGENEOUS POLYURETHANE

  • Laporta, M.;Pegoraro, M.;Bianchi, F.;Consolati, G.;Zanderighi, L.
    • Proceedings of the Membrane Society of Korea Conference
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    • 2003.07a
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    • pp.81-85
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    • 2003
  • PU block polymers are constituted by sequences of constitutional units CU which are : a diisocyanate T, a polyol or a polyamine V, an extensor E .Due to the CU different solubility parameters ,hard and soft micro domains are formed;they can aggregate into different phases. A linear PU can be described by two parameters R=T/N and $R_{E}$=(R-1)V/E.A stoichiometric model is proposed which gives the general formula of all the possible PU: X((TV)$_{k}$(TE)$_{n}$)$_{m}$X , where k and m can be calculated from the experimental molecular weights respectively of pre polymer and polymer and n= R-1.Physical properties depend on PU composition and on nature of CU. I.R. analysis is useful for discovering the hydrogen bonds location : DSC gives informations on the presence of the different phases .PALS analysis shows that nano cavities become tighter on increasing n. A series of particular Pus ,obtained from :TDI, a low molecular weight polyol, a cyclic extensor, at different R and RE was prepared and analysed. These PU are amorphous, monophasic and appear to be good candidates for membranes.nes.nes.

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BERGMAN TYPE OPERATORS ON SOME GENERALIZED CARTAN-HARTOGS DOMAINS

  • He, Le;Tang, Yanyan;Tu, Zhenhan
    • Journal of the Korean Mathematical Society
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    • v.58 no.6
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    • pp.1347-1365
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    • 2021
  • For µ = (µ1, …, µt) (µj > 0), ξ = (z1, …, zt, w) ∈ ℂn1 × … × ℂnt × ℂm, define $${\Omega}({\mu},t)=\{{\xi}{\in}\mathbb{B}_{n_1}{\times}{\cdots}{\times}\mathbb{B}_{n_t}{\times}\mathbb{C}^m:{\parallel}w{\parallel}^2 where $\mathbb{B}_{n_j}$ is the unit ball in ℂnj (1 ≤ j ≤ t), C(χ, µ) is a constant only depending on χ = (n1, …, nt) and µ = (µ1, …, µt), which is a special type of generalized Cartan-Hartogs domain. We will give some sufficient and necessary conditions for the boundedness of some type of operators on Lp(Ω(µ, t), ω) (the weighted Lp space of Ω(µ, t) with weight ω, 1 < p < ∞). This result generalizes the works from certain classes of generalized complex ellipsoids to the generalized Cartan-Hartogs domain Ω(µ, t).

A NEW CHARACTERIZATION OF PRÜFER v-MULTIPLICATION DOMAINS

  • CHANG, GYU WHAN
    • Korean Journal of Mathematics
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    • v.23 no.4
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    • pp.631-636
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    • 2015
  • Let D be an integral domain and w be the so-called w-operation on D. In this note, we introduce the notion of *(w)-domains: D is a *(w)-domain if $(({\cap}(x_i))({\cap}(y_j)))_w={\cap}(x_iy_j)$ for all nonzero elements $x_1,{\ldots},x_m$; $y_1,{\ldots},y_n$ of D. We then show that D is a $Pr{\ddot{u}}fer$ v-multiplication domain if and only if D is a *(w)-domain and $A^{-1}$ is of finite type for all nonzero finitely generated fractional ideals A of D.

MORPHOLOGICAL CHARACTERISTICS OF NONLINEAR OPTICAL MOLECULES AT THE AIR/WATER INTERFACE

  • Lim, Sung-Taek;Park, Mi-Kyung;Shin, Dong-Myung;Kwon, Ohoak
    • Journal of Photoscience
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    • v.5 no.1
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    • pp.11-15
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    • 1998
  • The texture change of non-linear optical molecules at the air/water interface was investigated as a function of surface pressure with Brewster angle microscopy. The texture change resulted from the aggregation of dye molecules is important to understand the film uniformity and grain formation process. The 4-Octadecylhydroxy-4'-nitrostilbene (OHNS) generated the small spots of size around 1$\mu$m. The spots exhibit high contrast with other film area and do not show angle dependent reflectivity change. It is interesting to observe that the size of the domain stays the same as the film pressure increases. At high surface pressure, the contrast ratio of domains becomes high, which means dense packing of OHNS. And, the size of domain grows. In the middle of domain, highly contrasted domains are formed. The first and the second order transitions of OHNS observed from surface pressure-area isotherm result from the two types of grains. The N,N-Dihexadecylcyanoaniline (DHCA) formed highly contrasted gains over entire region, and the grains are the double layers. The difference in Langmuir film of OHNS and DHCA at the air/water interface is consistent with the small tilt angle from the surface normal for OHNS and the large tilt angle for DHCA in the Langmuir-Blodgett films.

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Cloning and Analysis of Medium-Chain-Length Poly(3-Hydroxyalkanoate) Depolymerase Gene of Pseudomonas luteola M13-4

  • Park, In-Jae;Rhee, Young-Ha;Cho, Nam-Young;Shin, Kwang-Soo
    • Journal of Microbiology and Biotechnology
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    • v.16 no.12
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    • pp.1935-1939
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    • 2006
  • The gene encoding the extracellular medium-chain-length poly(3-hydroxyalkanoate) (MCL-PHA) depolymerase of Pseudomonas luteola Ml3-4, $phaZ_{plu}$, was cloned and analyzed. It was found to be 849 bp, with a deduced protein of 282 amino acids, and was revealed to have a typical leader peptide at its N terminus. The amino acid sequence of $PhaZ_{plu}$ revealed relatively low identity (69 to 72%) with those of other Pseudomonas MCL-PHA depolymerases. In comparison with the amino acid sequences of all available MCL-PHA depolymerases, the depolymerase was found to consist of three domains in sequential order; signal peptide, an N-terminal substrate binding domain, and a catalytic domain, indicating that $PhaZ_{plu}$ belongs to the type IV depolymerases family. The enzyme also contained Asn as an oxyanion hole amino acid.

PHOTOPHYSICAL AND OPTICAL PROBE PROPERTIES OF 1-(p-N,N-DIMETHYLAMINOPHENYL)-4-PHENYL-2-METHYL-1E,3E-BUTADIENE

  • Singh, A.K.;Krishna, T.S.R.
    • Journal of Photoscience
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    • v.4 no.1
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    • pp.1-5
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    • 1997
  • A hitherto unknown diphenylbutadiene analog viz. 1-(p-N,N-dimethylaminophenyl)-4-phenyl-2-methyl-1E,3E-butadiene (10) has been prepared and its absorption, excitation, and fluorescent emission properties in different media including various organic solvents and aqueous bovine serum albumin (BSA) have been studied. For comparision, these properties have also been investigated for the parent diphenylbutadiene (2). Diene 10 exhibits solvent polarity/polarizability-sensitive fluorescence properties ($\lambda$$_{max}$, $\Phi$$_f$, $\tau$$_f$, K$_f$, f). It also binds to the hydrophobic domains of aqueous bovine serum albumin (BSA) with a binding constant of 3.89 x 10$^4$ M$^{-1}$. The relative fluorescence quantum yield of 10 increases, while, the fluorescence lifetime decreases with increasing concentration of-BSA. The results highlight the polar character of the singlet excited state of diphenylpolyenes and the utility of 10 as fluorescence probe for studying microenvironments of organized assemblies and biological supramolecular structures.

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