• Title/Summary/Keyword: Linear Cell

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Establishment of a linear regression equation for quantification of beta-hemolytic Escherichia coli in different media and survival of hemolytic Escherichia coli after blending with three different media

  • Kim, Jae Cheol;Pluske, John R.;Yoo, Jaehong;Heo, Jung Min
    • Korean Journal of Agricultural Science
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    • v.41 no.2
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    • pp.135-139
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    • 2014
  • Pathogenic E. coli associated post-weaning diarrhea (PWD) and edema disease are common diseases in commercially-housed weanling pigs. An enterotoxigenic E. coli (ETEC) oral challenge model has been used to mimic the physiological responses observed in commercial conditions. However, an oral challenge procedure has two major limitations: (1) the ETEC cell density is unknown at the point of oral inoculation, and (2) blending ETEC with traditional TSB (trypticase soy broth) is not palatable and hence decreases acceptability by piglets. Therefore, the purposes of this study were to (1) establish a regression equation that can be used for estimation of ETEC concentration in dilution media using the spectrophotometric measurement of cell density; and (2) examine survival of ETEC after blending either with TSB, sweetener or dextrose. A strain of ETEC (serogroup beta-hemolytic E. coli O149; K91; F4; toxins LT, STa, STb) was grown in TSB for 3.5 hours, centrifuged, the supernatant was discarded, and the ETEC pellet was then blended either with TSB (100 mL), sweetener (60 mL TSB + 40 mL fruit flavored concentrate), or dextrose (50 mL TSB + 50 mL dextrose; 0.5g/mL dextrose). Cell density was measured using the colorimetric method and also plated on a 5% sheep blood agar for counting of ETEC colony forming units at 0, 5, 35, 65 and 125 min after blending. The optical density at 600 nm explained 83% of ETEC colony forming units, indicating that the established linear equation (y= 6E+08x - 4E+07, P<0.004) can be used for robust quantification of ETEC cell density in TSB, sweetener and dextrose media. When ETEC was blended with sweetener and dextrose, survival of ETEC was decreased by 45% and 72% within 5 min post-blending. Therefore, further research is required to find out the suitable medium that has potential to improve palatability without compromising survival of ETEC.

Comparative study of linear and cyclic forms of apoptosis-targeting peptide

  • Ha, Yeong Su;Soni, Nisarg;Huynh, Phuong Tu;Lee, Byung-Heon;An, Gwang Il;Yoo, Jeongsoo
    • Journal of Radiopharmaceuticals and Molecular Probes
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    • v.2 no.2
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    • pp.96-102
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    • 2016
  • Apoptosis, a genetically determined process of programmed cell death, is considered a vital component of various processes including normal cell turnover, animal development, and tissue homeostasis. It has a crucial role in many medical disorders and hence the development of non-invasive imaging tool is highly demanded. Recently, we have developed a peptide-based radioactive probe (ApoPep-1) for apoptosis detection. In that work the potential of probe for apoptosis detection was verified, however in vivo stability of radiolabeled peptide was not enough to monitor apoptosis for extended period. In current study, we prepared cyclic ApoPep-1 peptides to improve the stability of origianl linear ApoPep-1 and carried out direct comparison studies in vitro and in vivo. A targeting efficacy of newly synthesized cyclic ApoPep-1 peptide for apoptosis was confirmed in acute myocardial infarct model.

A Diagnosis Method of Basal Cell Carcinoma by Raman Spectra of Skin Tissue using NMF Algorithm (피부 조직의 라만 스펙트럼에서 NMF 알고리즘을 통한 기저 세포암 진단 방법)

  • Park, Aaron;Baek, Sung-June
    • Journal of the Institute of Electronics and Information Engineers
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    • v.50 no.8
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    • pp.196-202
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    • 2013
  • Basal cell carcinoma (BCC) is the most common skin cancer and its incidence is increasing rapidly. In this paper, we propose a diagnosis method of basal cell carcinoma by Raman spectra of skin tissue using the NMF(non-negative matrix factorization) algorithm. After preprocessing steps, measured Raman spectra is used classification experiments. The weight and the basis can be obtained in a simple matrix operation and a column vector of the matrix decompsed by the NMF. Linear combination of bases and weights, it is possible to approximate the average of Raman spectra. The classification method is to select the class which to minimize the root mean square of the difference of the linear combination and the objective spectrum. According to the experimental results, the proposed method shows the promising results to diagnosis BCC. In addition, it confirmed that the proposed method compared with the previous research result could be effectively applied in the analysis of the Raman spectra.

Temperature Dependency of Non-dispersive Infrared Carbon Dioxide Gas Sensor by Using White-Cell Structure (White-Cell 구조를 응용한 비분산 적외선 이산화탄소 센서의 온도특성)

  • Yi, SeungHwan;Park, YoungHwan;Lee, JaeKyung
    • Journal of Sensor Science and Technology
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    • v.25 no.5
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    • pp.377-381
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    • 2016
  • NDIR $CO_2$ gas sensor was prototyped with ASIC implemented thermopile sensor which included temperature sensor and White-Cell structure in this paper. The temperature dependency of dual infrared sensors ($CO_2$ and reference IR sensors) has been characterized and their output voltage ratios according to the temperature and gas concentration were presented in this paper for achieving temperature compensation algorithm. The initial output voltages of NDIR $CO_2$ gas and reference IR sensors showed $3^{rd}$ order polynomial and linear output voltages according to the variation of ambient temperatures from 253 K to 333 K, respectively. The output voltages of temperature sensor presented a linear dependency according to the ambient temperature and could be described with V(T) = -3.0069+0.0145T(V). The characteristics of output voltage ratios could be modeled with five parameters which are dependent upon the ambient temperatures and gas concentration. The estimated $CO_2$ concentrations showed relatively high error below 300 ppm (maximum 572 % at 7 ppm $CO_2$ concentration), however, as the concentration increased from 500 ppm to 2,000 ppm, the overall estimated errors of $CO_2$ concentrations were less than ${\pm}10%$ in this research.

Mouse model system based on apoptosis induction to crypt cells after exposure to ionizing radiation (방사선에 전신 조사된 마우스 음와 세포의 아포토시스 유도를 이용한 생물학적 선량 측정 모델 개발 연구)

  • Kim, Tae-Hwan
    • Korean Journal of Veterinary Research
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    • v.41 no.4
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    • pp.571-578
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    • 2001
  • To evaluate if the apoptotic fragment assay could be used to estimate the dose prediction after radiation exposure, we examined apoptotic mouse crypt cells per 1,000 cells after whole body $^{60}Co$ $\gamma$-rays and 50MeV ($p{\rightarrow}Be^+$) cyclotron fast neutron irradiation in the range of 0.25 to 1 Gy, respectively. The incidence of apoptotic cell death rose steeply at very low doses up to 1 Gy, and radiation at all doses tigger rapid changes in crypt cells in stem cell region. These data suggest that apoptosis may play an important role in homeostasis of damaged radiosensitive target organ by removing damaged cells. The curve of dose-effect relationship for the data of apoptotic fragments was obtained by the linear-quadratic model $y=0.18+(9.728{\pm}0.887)D+(-4.727{\pm}1.033)D^2$ ($r^2=0.984$) after $\gamma$-rays irradiation, while $y=0.18+(5.125{\pm}0.601)D+(-2.652{\pm}0.7000)D^2$ ($r^2=0.970$) after neutrons in mice. The dose-response curves were linear-quadratic, and a significant dose-response relationship was found between the frequency of apoptotic cell and dose. These data show a trend towards increase of the numbers of apoptotic crypt cells with increasing dose. Both the time course and the radiation dose-response curve for high and low linear energy transfer (LET) radiation modalities were similar. The relative biological effectiveness (RBE) value for crypt cells was 2.072. In addition, there were significant peaks on apoptosis induction at 4 and 6h after irradiation, and the morpholoigcal findings of the irradiated groups were typical apoptotic fragments in crypt cells that were hardly observed in the control group. Thus, apoptosis in crypt cells could be a useful in vivo model for studying radio-protective drug sensitivity or screening test, microdosimetric indicator and radiation-induced target organ injury. Since the apoptotic fragment assay is simple, rapid and reproducible in the range of 0.25 to 1 Gy, it will also be a good tool for evaluating the dose response of radiation-induced organ damage in vivo and provide a potentially valuable biodosimetry for the early dose prediction after accidental exposure.

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Replicative Senescence in Cellular Aging and Oxidative Stress (세포 노화에 있어서 복제 세네센스 현상과 산화적 스트레스의 영향)

  • 박영철
    • Toxicological Research
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    • v.19 no.3
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    • pp.161-172
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    • 2003
  • Explanted mammalian cells perform a limited number of cell division in vitro and than are arrested in a state known as replicative senescence. Such cells are irreversibly blocked, mostly in the G1 phase of cell cycle, and are no longer sensitive to growth factor stimulation. Thus replicative senescence is defined as a permanent and irreversible loss of replicative potential of cells. For this characteristic, replicative senescence seems to evolve to protect mammalian organism from cancer. However, senescence also contributes to aging. It seems to decrease with age of the cell donor and, as a form of cell senescence, is thought to underlie the aging process. Extensive evidence supports the idea that progressive telomere loss contributes to the phenomenon of cell senescence. Telomeres are repetitive structures of the sequence (TTAGGG)n at the ends of linear chromosomes. It has been shown that the average length of telomere repeats in human somatic cells decreases by 30∼200 bp with each cell division. It is generally believed that when telomeres reach a critical length, a signal is activated to initiate the senescent program. This has given rise to the hypothesis that telomeres act as mitotic clocks to regulate lifespan. One proposes that cumulative oxidative stress, mainly reactive oxygen species generated from mitochondria, may mainly cause telomere shortening, accelerating aging. Here, the biological importance and mechanism of replicative senescence were briefly reviewed. Also it was summarized that how oxidative stress affects replicative senescence and telomere shortening.

The Effects of Cell-Phone Dependency of Adolescents: Moderated Analysis of Self-Esteem (청소년의 휴대폰 의존에 미치는 영향: 자존감의 조절효과 검정)

  • Shim, Hyun-Jin;Rhee, Hyun-Sill
    • The Korean Journal of Health Service Management
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    • v.11 no.2
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    • pp.117-127
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    • 2017
  • Objectives : This study aimed to identify factors of adolescents' cell-phone dependency using Agnew's General Strain Theory (GST) and the perspective of adolescents' micro-systems. A second aim was to verify the moderating effect of self-esteem. Methods : In total, 2,046 students who participated in a study on KCTPS mid. 1 panel 3 Wave by the National Youth Policy Institute were examined in this research. Data were analyzed through descriptive statistics, factor analysis, reliability tests, and hierarchical linear regression using SPSS Ver. 22.0. Results : The strain factors had a positive effect on adolescents' depression, and depression had a positive effect on cell-phone dependency. In addition, self-esteem had a negative moderating effect between depression and cell-phone dependency. Conclusions : Factors of cell-phone dependency were identified. The findings of the study indicate that an intervention is required to lower strain and depression and to enhance self-esteem among adolescents.

Optimized and Portable FPGA-Based Systolic Cell Architecture for Smith-Waterman-Based DNA Sequence Alignment

  • Shah, Hurmat Ali;Hasan, Laiq;Koo, Insoo
    • Journal of information and communication convergence engineering
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    • v.14 no.1
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    • pp.26-34
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    • 2016
  • The alignment of DNA sequences is one of the important processes in the field of bioinformatics. The Smith-Waterman algorithm (SWA) performs optimally for aligning sequences but is computationally expensive. Field programmable gate array (FPGA) performs the best on parameters such as cost, speed-up, and ease of re-configurability to implement SWA. The performance of FPGA-based SWA is dependent on efficient cell-basic implementation-unit design. In this paper, we present an optimized systolic cell design while avoiding oversimplification, very large-scale integration (VLSI)-level design, and direct mapping of iterative equations such as previous cell designs. The proposed design makes efficient use of hardware resources and provides portability as the proposed design is not based on gate-level details. Our cell design implementing a linear gap penalty resulted in a performance improvement of 32× over a GPP platform and surpassed the hardware utilization of another implementation by a factor of 4.23.

Performance Increase for a 2 kW Open Cathode Type Fuel Cell Using Temperature/Humidity Control (2 kW급 개방 캐소드형 연료전지 출력 향상을 위한 온습도 제어)

  • YUAN, WEIWEI;CHOI, MIHWA;YANG, SEUGRAN;KIM, YOUNG-BAE
    • Journal of Hydrogen and New Energy
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    • v.28 no.4
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    • pp.369-376
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    • 2017
  • Temperature and humidity regulations of an open-cathode PEM fuel cell with balance of plant (BOP) are developed in this study. The axial fan, a bubble humidifier, set of solenoid valves and a controller are used to perform temperature and humidity control simultaneously. A fuzzy controller is designed, and it shows its superiority in real-time controlling for strong non-linear dynamical fuel cell system. The axial fan speed is used for temperature control and solenoid valve on/off signal of the bubble humidifier is used for humidity control. The axial fan speed is controlled to keep the fuel cell temperature within the desired point. Meanwhile, the bubble humidifier is utilized to moisture hydrogen to manage the water content of membrane. The results show that the proposed fuzzy controller effectively increases the output power of 10% for a PEM fuel cell.

Impedance characteristics of AgO-Zn cell at various State of Charge (AgO-Zn 전지의 충전상태에 따른 임피던스 특성)

  • Yoon, Youn-Saup;Kim, Byung-Kuan;An, Sang-Yong;Kim, Eung-Jin;Lee, Jun-Ho
    • Journal of the Korean Applied Science and Technology
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    • v.25 no.1
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    • pp.52-57
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    • 2008
  • In the present study, impedance characteristics for AgO-Zn cell at various State-of-Charge (SoC) has been studied. The impedance measurements of AgO-Zn cell at various SoC were made over the frequency range from 100kHz to 10mHz with an amplitude 5mV. The impedance parameters have been evaluated by the analysis of the data using an equivalent circuit and a Non-linear least squares (NLLS) fitting method. The total resistances reflects the SoC of the cell. This indicates that the total resistance is important parameter for predicting SoC of AgO-Zn cell.