• Journal of Plant Biotechnology
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• v.47 no.1
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• pp.15-25
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• 2020

Allium L. is one of the largest genera of the Amaryllidaceae family, with more than 920 species including many economically important species used as vegetables, spices, medicines, or ornamental plants. Currently, DNA barcoding tools are being successfully used for the molecular taxonomy of Allium. A total of 46 Allium species were collected from their native areas, and DNA was extracted using the IBRC DNA extraction kit. We used specific primers to PCR amplify matK. DNA sequences were edited and aligned for homology, and a phylogenetic tree was constructed using the neighbor-joining method. The results show thymine (38.5%) was the most frequent and guanine (13.9%) the least frequent nucleotide. The matK regions of the populations were quite highly conserved, and the amount of C and CT was calculated at 0.162 and 0.26, respectively. Analysis of the nucleotide substitution showed C-T (26.22%) and A-G (8.08%) to have the highest and lowest percent, respectively. The natural selection process dN/dS was 1.16, and the naturality test results were -1.5 for Tajima's D and -1.19 for Fu's Fs. The NJ dendrogram generated three distinct clades: the first contained Allium austroiranicum and A. ampeloprasum; the second contained A. iranshahrii, A. bisotunense, and A. cf assadi; and the third contained A. rubellum and other species. In this study, we tested the utility of the matK region as a DNA barcode for discriminating Allium. species.

• Proceedings of the Plant Resources Society of Korea Conference
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• 2019.10a
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• pp.24-24
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• 2019

Iris L. is a perennial genus comprising approximately 300 species worldwide, with the greatest number of endemic species occurring in Asia. Iris is one of the largest genera in the family Iridaceae and includes ca. 15 species native to Korea. Although chromosome number change, karyotype restructuring, and genome size variation play an important role in plant genome diversification, understanding the karyotype variation in Korean Iris species has been hampered by the wide range of base chromosome number (x = 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 22) reported to date. This study documents the chromosome numbers, karyotype structure and genome size variation in Iris ruthenica K. Gawl., an endangered species in Korea obtained using classic Feulgen staining and flow cytometry. The chromosome number of all investigated plants from the nine populations was 2n = 42. All individuals studied possessed metacentric and submetacentric chromosomes. The genome size of the I. ruthenica in eight wild populations ranged from 2.39 pg/1C to 2.45 pg/1C ($2.42{\pm}0.02pg/1C$: $mean{\pm}SD$). This study provides the first report of genome size variation in Iris ruthenica in Korea. This study lays foundation for cytogenetic further analyses employing by fluorescence in situ hybridization (FISH) to better understand the chromosomal evolution in this species and in the whole genus.

• Proceedings of the Plant Resources Society of Korea Conference
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• 2020.08a
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• pp.10-10
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• 2020

전 지구적으로 생물다양성의 지속적인 감소 추세에 따른 생물자원의 중요성이 증가하는 시점에서, 식물 유전자원의 종 다양성 보존과 지속가능한 이용을 위한 체계적이고 현실적인 방안 마련이 절실한 실정이다. 국내에서도 2017년에 유전자원 접근 및 이익 공유에 대한 나고야 의정서가 발효됨에 따라 식물유래 BT산업 소재의 국내 자급이 불가피해진 상황이며, 더불어 국토의 생태복원에 적합한 식물 소재 개발의 중요성이 대두되면서 자생식물의 종자 수급기반 대책은 국가적 차원에서 중대한 과제라 할 수 있다. 우리나라는 면적 대비 높은 식물 종 다양성을 보이며, 이는 종자의 휴면유형 또한 다양하고 복잡할 수 있다는 것을 의미한다. 따라서 식물유전자원으로써의 보존 및 국가 경제적 이익을 위한 종자 활용, 산업화를 위해서는 종자의 생리적 특성에 기반 한 데이터베이스의 축적과 효과적인 활용을 위한 종자 휴면유형 분류 및 적정 휴면타파 조건을 확립할 필요가 있다. 현재까지 다양한 식물종에서 종자 휴면의 하위 카테고리가 계속적으로 세부 분류되고 있으나, 아직까지 밝혀지지 않은 세부 휴면유형에 의해 많은 유용 식물자원의 활용이 제한적이다. 종자의 휴면유형은 크게 외생휴면(Exogenous dormancy)과 내생휴면(Endogenous dormancy)으로 분류되며, 국내에서는 내생휴면에 대한 연구가 주를 이루고 있다. 한편 외생휴면은 물리적 휴면(Physical dormancy), 기계적 휴면(Mechanical dormancy) 및 화학적 휴면(Chemical dormancy)으로 세부 분류되며, 기계적 휴면과 화학적 휴면은 내생휴면인 생리적 휴면(Physiological dormancy)에 포함되어야 한다는 의견도 있다. 물리적 휴면 종자에서는 water-gap 복합체의 존재 등에서 원인을 찾을 수 있으나, 발아억제 호르몬에 기인하는 화학적 휴면 및 종(과)피 또는 배유에 의한 기계적 휴면은 배의 성장잠재력과 발달에 의해 타파될 수 있다. 이와 같이 실제로 많은 식물 종에서 다양하게 존재하는 외생휴면 유형에 대해 내생휴면과는 명확히 다른 방식으로 접근되어야 하므로, 다년간의 체계적 연구를 통해 미흡한 종자생리 연구 분야를 보완하고 자생식물의 종자 활용도를 높일 수 있을 것으로 기대한다.

• Korean Journal of Plant Taxonomy
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• v.46 no.2
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• pp.213-246
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• 2016

Algific talus slopes tend to occur on steep north-facing slopes with bedrock that retains ice and emits cold air throughout the growing season. Algific talus slopes provide a suitable microclimate for disjunct or relict populations of northern plant species at low altitude habitats in temperate zones. The purpose of this study is to suggest a strategy for the comprehensive conservation of the vegetation of algific talus slopes through studies of the floristics and plant species compositions and threat factors at present and in the future of 15 major algific talus slopes in Korea. As a result, the vascular plants surveyed on 15 major algific talus slopes were recorded, with a total of 587 taxa, 109 families, 323 genera, 531 species, 7 subspecies, 47 varieties 1 form and 1 hybrid. Of them, endemic plants numbered 26 taxa, and threatened species according to the IUCN valuation basis numbered 8 taxa. Fourth (IV) and fifth (V) degree indicator species as specified by floristic subregions numbered 31 taxa. Peculiarly, several subalpine-native plant species, in this case Cystopteris fragilis, Gymnocarpium dryopteris, Huperzia selago, Rosa koreana, Vaccinium vitis-idaea and Woodsia hancockii, were distributed on algific talus slopes at 100-600 m above sea level. Numerous and diverse biological resources native to algific talus slopes in Korea have been consistently disturbed or damaged by human activities without some form of protection. An all-taxa biodiversity inventory should be surveyed to provide more information about all biological species living on algific talus slopes. In addition, conservation strategies to ensure biodiversity and effective management of algific talus slopes are discussed in detail.

• Journal of the Korean Institute of Landscape Architecture
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• v.38 no.2
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• pp.94-108
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• 2010

The purpose of this study is to provide data for the restoration of 'Yongyun(龍淵)' and 'Hwahongmun(華虹門)' through an investigation of the vicinity of their original landscapes at the time of construction of Hwaseong in Suwon and through tracing the transformative process of the environments of this vicinity. The results are as follows; As identified by 'Yongyunjung(龍淵亭)' and 'Yongdugak(龍頭閣)', other names of Yongyun, 'Banghwasuryujung(訪花隨柳亭)', which was built on 'Yongduam', is a facility whose place identity is highlighted with a sense of unity with Yongyun. The south lakefront of Yongyun, bordering Banghwasuryujung, has boundaries that make the best use of the natural geographical features of Yongduam while the current circumference of Yongyun is comparatively shorter than its original state. The size of 'Joongdo(中島)', however, seems to be an example of apparent over-design complement and reorganize 'Joongdo', which had been restored larger than its original state at the time of restoration in the 1970s. The depth of 'Yongyun' was created to be lower than the actual depth, without consideration for its initial depth, as soil was accumulated through continuous flooding after it was created. It is assumed that the original drains which were installed about 10m inside the lake were created facing the stream. As regards the planting environment, a circular planting of willows was made in the outskirts of 'Yongyun', except the 'Yongduam' which is a pure forest, and a mix of 'Pinus densiflora', shrubbery and deciduous broad leaf trees was planted in 'Joongdo'. Of the plants growing in the area of this study, plant species introduced to Korea after Hwaseong was constructed are found, most of which provide interest and attraction. The old pine trees growing in a group once grew in the castle areas of the vicinity even in the 1920s, the period of Japanese occupation, but they disappeared from the area in the aftermath of subsequent urban development and the Korean War. Although restored to the site, the number and space taken up by these trees are insignificant compared to those of the original environment. On the basis of these results, the following is considered necessary for the true restoration of the vicinity of 'Yongyun' and 'Hwahongmun': First, the grounds of 'Yongyun' should be dredged deeply enough to expose the bedrock and should be recreated in the rough outline of a half moon by extension to the southwest toward 'Yongduam' and 'Hwahongmun', and the size of 'Joongdo' should be significantly reduced. Secondly, considering that most plant species, except the pine trees and wild trees in 'Yongduam', are non-native plants introduced in order to provide such attractions such as the appreciation of scenic areas, they should be replaced with native species, mainly with the pine trees which were utilized during the construction of Hwaseong. The weeping willows planted in the 'middle-island' should be relocated to the outskirts of 'Yongyun', and replaced with pine trees as the major trees and maple trees or deciduous broadleaf trees to fill in the gaps. Thirdly, exotic species such as the 'Pinus rigida' planted in a group around 'Banghwasuryujung' and 'Bugammun' and 'Pinus strobus' planted in the vicinity of Hwahongmun' should be removed.

• Journal of Environmental Science International
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• v.23 no.5
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• pp.771-780
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• 2014

Tetragonia tetragonides is a medicinal plant native to ocean sand soil of southern provinces and has significant effects on the prevention and curing of gastroenteric disorders. Despite of its popularity, supply of the plant has never met the level of demand because of the absence of an adequate culturing method. The present study, thereby, was conducted for classifying the plants with geographically different characteristics, studying growth habits, developing a new culturing method and establishing a large scale propagation system of selected superior individual plants. The study was also aimed for revealing optimum conditions for seed treatment, fertilization, and efficient culturing system and thereby, for utilizing the plant as a new income source for rural communities. The seed was elongated with size of 2.6 mm (width) ${\times}$ 1.8 mm (length). No difference in seed size was observed depending on different inhabitate. Each flower produced about 4.5~4.8 seeds. Germination rate was high for seeds matured for 40 days after fertilization, but deceased to 50% for seeds matured only for 20 or 30 days. Seed dormancy lasted 6 months and seed storage at humid $5^{\circ}C$ facilitated germination. Mechanical obstruct of seed germination was due to seed coat and removal of seed coat enhanced the germination rate. Optimum temp. for seed storage was $5^{\circ}C$, and high germination rate was maintained for 350 days. However, for stratification condition or at room temperature, germination was significantly reduced as storage time increased Optimum treatment of plant growth regulators was soaking in $GA_3$ 250 mg/L for 1 hr. The priming treatment with 50 mM $Ca(NO_3)_2$ at $20^{\circ}C$ for two days improved the seed germination with 10% compared to non-treated control. The treatment of 20% NaOCl for 3 hr. improved the seed germination rate up to 10% and 1 day ahead.

• Journal of Bio-Environment Control
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• v.22 no.2
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• pp.131-137
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• 2013

This study was conducted to develop new indoor plants and to investigate the effects of light intensity on the growth of Trachelospermum asiaticum var. intermedium Nakai and Piper kauzura. Most of T. asiaticum var. intermedium Nakai under 100 lux light intensity were blighted in two months, whereas survival rate was 83.3% after five months under 1,000 lux and 2,500 lux. Plant height, number of leaf, leaf width and leaf length increased as light intensity increased. The plants maintained under 2,500 lux showed the greatest plant height and leaf number. Piper kadzura Ohwi was defoliated and blighted in four months under 100 lux light intensity, whereas survival rate was 100% after five months under 1,000 lux and 2,500 lux. But, 1,000 lux light intensity was more favorable chlorophyll contents, leaf length and leaf width than 2,500 lux light intensity. Slight increase of chlorophyll contents and leaf growth under 1,000 lux indicates that Piper kadzura Ohwi could be utilized highly as a indoor ornamental plant.

• Weed & Turfgrass Science
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• v.4 no.4
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• pp.315-320
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• 2015

Burcucumber (Sicyos angulatus) is an annual invasive plant species originated from North America. This species grows by twining around tree trunks, and blocks other plants from photosynthesis. Thus, it has caused the destruction of the ecosystem and biological diversity by threatening native plants. This study was performed to find out the effect of different soil water content (20%, 13%, 10%, 3%) and various shading degrees (0%, 60%, 80%) on the growth and photosynthesis-related activity of burcucumber. In the responses of burcucumber to soil water content, plant height (PH), leaf length (LL), leaf width (LW) and photosynthetic efficiency (PE) were lower at 20% water content than 10% reflecting that burcucumber plant grow well in the less dry soil and shows poor growth under wet soil condition. In shading experiment, PH, LL, LW and PE were lower at 80% than 60% shading and in general, the growth characteristics were lowered as the shading intensity increased. The improved growth of burcucumber under highly or moderately shaded condition implies that the plant can grow well without growth retardation and can be adapted to shading condition with other tall plant species including tree. Further study on the combination effects of above factors should be conducted in future for effective ecological control of burcucumber.

• Microbiology and Biotechnology Letters
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• v.40 no.3
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• pp.261-267
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• 2012

Coastal sand dunes are important for ecosystems due to the variety of rare species that can be found in this kind of habitat, and the beautiful landscapes they create. For environmental remediation, a potential strategy is phytoremediation using the symbiotic relationship of plants and microbes in the rhizosphere, which has proven ecologically sound, safe, and cost effective. Ninety-five colonies were isolated from the rhizosphere soil (RS) or rhizoplane (RP) of Rorippa islandica, Rumex crispus, Artemisia princeps var. orientalis, Lilium sp Stellaria media, and Gramineae. These colonies were then tested for plant growth promoting activities (PGPAs) such as 1-aminocyclopropane-1-carboxylic acid (ACC) deaminase activity, and siderphores synthesis ability. In addition, salt tolerance was evaluated at 4% and 8% salt concentrations. It was observed that amongst the test subjects about 50% of the strains had a high resistance to salinity. Many of them could produce indole-3-acetic acid (IAA) IAA (in RS 13.9% and in RP 7.6%), exhibited ACC deaminase activity (55.8% in RS and 36.6% in RP), and could synthesize siderphores (62.7% in RS and 50% in RP). Correlation coefficient analyses were carried out for the three kinds of plant growth promoting abilities (PGPA) and salt tolerance. A positive correlation was found between an ability to synthesize siderphores and ACC deaminase activity (r=0.605, p<0.037). Similarly, positive correlations were noted between salt tolerance and ACC deaminase activity (r=0.762, p<0.004, r=0.771), and salt tolerance and an ability to synthesize siderphores (r=0.771, p<0.003).

• Molecules and Cells
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• v.27 no.4
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• pp.423-428
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• 2009

Superoxide dismutases (SODs) constitute the first line of cellular defense against oxidative stress in plants. SODs generally occur in three different forms with Cu/Zn, Fe, or Mn as prosthetic metals. We cloned the full-length cDNA of the Thellungiella halophila Cu/Zn-SOD gene ThCSD using degenerate RT-PCR and rapid amplification of cDNA ends (RACE). Sequence analysis indicated that the ThCSD gene (GenBank accession number EF405867) had an open reading frame of 456 bp. The deduced 152-amino acid polypeptide had a predicted molecular weight of 15.1 kDa, an estimated pI of 5.4, and a putative Cu/Zn-binding site. Recombinant ThCSD protein was expressed in Escherichia coli and assayed for SOD enzymatic activity in a native polyacrylamide gel. The SOD activity of ThCSD was inactivated by potassium cyanide and hydrogen peroxide but not by sodium azide, confirming that ThCSD is a Cu/Zn-SOD. Northern blotting demonstrated that ThCSD is expressed in roots, stems, and leaves. ThCSD mRNA levels increased by about 30-fold when plants were treated with sodium chloride (NaCl), abscisic acid (ABA), and indole-acetic acid (IAA) and by about 50-fold when treated with UVB light. These results indicate that ThCSD is involved in physiological pathways activated by a variety of environmental conditions.