• Title/Summary/Keyword: III-IV loop

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Differential Expression of Four $Ca_v$3.1 Splice Variants in the Repeat III-IV Loop

  • Lee, Sang-Soo;Park, You-Mi;Kang, Ho-Won;Bang, Hyo-Weon;Jeong, Seong-Woo;Lee, Jung-Ha
    • Animal cells and systems
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    • v.12 no.3
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    • pp.137-141
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    • 2008
  • Molecular cloning revealed the three isoforms($Ca_v3.1,\;Ca_v3.2,\;and\;Ca_v3.3$) of the T-type calcium channel subfamily. Expression studies exhibited their distinctive electrophysiological and pharmacological properties, accounting for diverse properties of T-type calcium channel currents previously characterized from isolated cells. However, electrophysiological properties of ion channels have shown to be more diversified by their splice variants. We here searched splice variants of rat $Ca_v3.1$ T-type channel by reverse-transcription-polymerase chain reaction(RT-PCR) to further explore diversity of $Ca_v3.1$. Interestingly, analyses of cloned RT-PCR products displayed that there were at least four splicing variants of rat $Ca_v3.1$ in the loop connecting repeats III and IV. Southern blot analyses indicated that the predominantly detected variant in brain was $Ca_v3.1a$(492 bp), which were rarely detected in most of peripheral tissues. Other two variants($Ca_v3.1c$, 546 bp; $Ca_v3.1d$, 525 bp) were detected in most of the tissues examined. The smallest isoform($Ca_v3.1b$, 471 bp) was rarely detected all the tissues. Electrophysiological characterization of the splicing variants indicated that the splice variants differ in inactivation kinetics and the voltage dependence of activation and inactivation as well.

RELAP5 Analysis of the Loss-of-RHR Accident during the Mid-Loop Operation of Yonggwang Nuclear Units 3/4

  • J. J. Jeong;Kim, W. S.;Kim, K. D.;W. P. Chang
    • Proceedings of the Korean Nuclear Society Conference
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    • 1995.10a
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    • pp.403-410
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    • 1995
  • A loss of the residual heat removal (RHR) accident during mid-loop operation of Yong-gwang Nuclear Units 3/4 was analyzed using the RELAP5/MOD3.1.2 code. In this work the following assumptions are used; (i) initially the reactor coolant system (RCS) above the hot leg center line is filled with nitrogen gas, (ii) two 3/4-inch diameter vent valves on the reactor vessel head and the top of pressurizer in the reactor coolant system are always open, and a level indicator is connected to the RMR suction line, (iii) the two steam generators are in wet layup status and the steam generator atmospheric dump valve assemblies are removed so that the secondary side pressure remains at nearly atmospheric condition throughout the accident, and (iv) the loss of RHR is presumed to occur at 48 hours after reactor shutdown. Findings from the RELAP5 calculations are (i) the core boiling begins at ∼5 min, (ii) the peak RCS pressure is ∼3.0 bar, which implies a possibility of temporary seal break, (iii) ∼94 % of the decay heat is removed by reflux condensation in the steam generator U-tubes in spite of the presence of noncondensable gas, (iv) the core uncovery time is evaluated to be 7.2 hours. Significant mass errors were observed in the calculations.

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Blood Flow Changes by Anastomotic Method in Fontan Operation (폰탄 수술에서 문합방법에 따른 혈류 변화)

  • Kim, S.H.;Park, Y.H.;Cho, B.K.;Kim, J.H.;Hong, Y.S.;Kim, Y.H.;Kim, S.S.
    • Proceedings of the KOSOMBE Conference
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    • v.1996 no.05
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    • pp.203-206
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    • 1996
  • To understand the local fluid dynamics for different desists of Fontan operation, five models were made out of Pyrex glass to facilitate in-vitro study. Model I, II and III have same position of the center of the anastomosis of the IVC( inferior vena cava) with that of the SVC(superior vena cava), but Model IV and V have 10 mm offset between them. Also the anastomotic junction angles are different(Model I and $IV:90^{\circ}$, Model II and $V:70^{\circ}$, Model $III:45^{\circ}$). These models were then connected to a flow loop for flow visualization study. In Model I any dominant vortex was not seen in the central region of the juntion, but a large unstable vortex was created in the Model II and III. In Model IV and V a significant stagnation region was created in the middle of the offset region. It also showed that the flow direction from the IVC and SVC to the LPA(left pulmonary artery) and RPA(right pulmonary artery) highly depends on the offset of the junction rather than the anastomotic junction angle.

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Automatic generation of higher level design diagrams (상위 수준 설계 도면의 자동 생성)

  • Lee, Eun-Choul;Kim, Kyo-Sun
    • Journal of the Institute of Electronics Engineers of Korea SD
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    • v.42 no.11
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    • pp.23-32
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    • 2005
  • The automatic generation of circuit diagrams has been practically used in the HDL based design for decades. Nevertheless, the diagrams became too complicated for the designers to identify the signal flows in the RTL and system level designs. In this paper, we propose four techniques to enhance the roadability of the complicated diagrams. They include i) the transformation of repetitive instances and terminals into vector forms, ii) an improved loop breaking algorithm, iii) a flat tap which simplifies the two level bus ripping structure that is required for the connection of a bundle net to multiple buses, and iv) the identification of block strings, and alignment of the corresponding blocks. Towards validating the proposed techniques, the diagrams of an industrial strength design m generated. The complexity of the diagrams has been reduced by up to $90\%$ in terms of the number of wires, the aggregate wire length, and the area.

Development of diagnostic method for human Astrovirus with rapid, specific and high sensitivity using loop-mediated isothermal amplification method

  • Lee, Jin-Young;Rho, Jae Young
    • Korean Journal of Agricultural Science
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    • v.47 no.1
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    • pp.173-182
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    • 2020
  • Human Astrovirus (HuAstV), known as a waterborne virus, is a group IV positive-sense single-stranded RNA that belongs to Astroviridae. The first outbreak of HuAstV was reported in England in 1975. HuAstV can exist not only among clinical patients but also in various water environments, such as water for agriculture and vegetables. For diagnosis of HuAstV from water samples, a polymerase chain reaction (PCR) system has been developed. However, the PCR-based diagnostic method has problems in field application, such as reaction time, sensitivity and specificity. For this reason, in this study we developed the loop-mediated isothermal amplification assay (LAMP) system, aimed specifically at HuAstV. Three prepared LAMP primer sets were tested by specificity, non-specificity and sensitivity; one LAMP primer set was selected with optimum reaction temperature. The developed LAMP primer set reaction conditions were confirmed at 62℃, and detection sensitivity was 1 fg/μL. In addition, restriction enzyme HaeIII (GG/CC) was introduced to confirm that the LAMP reaction was positive. As a result, selected LAMP primer set was 100 - 1000 times more specific, rapid, and sensitive than conventional-nested PCR methods. For verification of the developed LAMP assay, twenty samples of cDNA from groundwater samples were tested. We expect that the developed LAMP assay will be used to diagnose HuAstV from various samples.

Multirate Sampled-Data Control System: Optimal Digital Redesign Approach (멀티레이트 샘플치 시스템: 최적 디지털 재설계 기법)

  • Kim, Do-Wan;Park, Jin-Bae;Jang, Kwon-Kyu;Joo, Young-Hoon
    • Proceedings of the KIEE Conference
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    • 2004.11c
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    • pp.708-710
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    • 2004
  • This paper studies a multirate sampled-data control for LTI systems by using the digital redesign (DR) method. In this note, to well tackle the problem associated with both the state matching and the stabilization, our nobel strategy is to minimize the linear quadratic cost function. The main features of the proposed method are that i) the delta-operator-based descretization method is applied to improve the state-matching performance in the fast sampling limit and/or the large input multiplicity; ii) the proposed multirate control scheme can improve the state-matching performance in the long sampling limit; iii) some sufficient conditions that guarantee the stability of the closed-loop discrete-time system and provide a guarantee cost for the cost function can be formulated in the LMIs format; and iv) an optimal sampled-data controller in the sense of minimizing the upper bound of the cost function is also given by means of an LMI optimization procedure.

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Modification of Substrate Inhibition of Synaptosomal Acetylcholinesterase by Cardiotoxins

  • Ranaei-Siadat, Seyed-Omid;Riazi, Gholam-Hosein;Sadeghi, Mehdi;Chang, Long-Sen;Lin, Shinne-Ren;Eghtesadi-Araghi, Peyman;Hakimelahi, Gholam Hossein;Moosavi-Movahedi, Ali Akbar
    • BMB Reports
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    • v.37 no.3
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    • pp.330-338
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    • 2004
  • Different types of cardiotoxin (I-V and n) were isolated and purified from the venom of the Taiwan cobra (Naja naja atra). The effects of these cardiotoxins were studied on membrane-bound acetylcholinesterase, which was isolated from a sheep's brain cortex. The results showed that cardiotoxins I-III, V, and n activated the enzyme by modification of substrate inhibition, but cardiotoxin IV's reaction was different. The inhibition and activation of acetylcholinesterase were linked to the functions of the hydrophobicity index, presence of a cationic cluster, and the accessible arginine residue. Our results indicate that Cardiotoxins have neither a cationic cluster nor an arginine residue in their surface area of loop I; therefore, in contrast to fasciculin, cardiotoxins are attached by loop II to the peripheral site of the enzyme. As a result, fasciculin seems to stabilize nonfunctional conformation, but cardiotoxins seem to stabilize the functional conformation of the enzyme. Based on our experimental and theoretical findings, similar secondary and tertiary structures of cardiotoxins and fasciculin seem to have an opposite function once they interact with acetylcholinesterase.

High-Temperature Design and Integrity Evaluation of Sodium-Cooled Fast Reactor Decay Heat Exchanger (소듐냉각고속로 붕괴열교환기의 고온 설계 및 건전성 평가)

  • Lee, Hyeong-Yeon;Eoh, Jae-Hyuk
    • Transactions of the Korean Society of Mechanical Engineers A
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    • v.37 no.10
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    • pp.1251-1259
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    • 2013
  • In this study, high temperature design and creep-fatigue damage evaluation of a decay heat exchanger (DHX) in the decay heat removal systems of a sodium-cooled fast reactor (SFR) have been performed. Detail design and 3D finite element analysis have been conducted for the DHXs to be installed in active and passive decay heat removal systems in Korean Generation IV SFR, and the DHX installed in the STELLA-1(Sodium integral effect test loop for safety simulation and assessment) at KAERI (Korea Atomic Energy Research Institute). Evaluations of creep-fatigue damage based on full 3D finite element analyses were conducted for the two Mod.9Cr-1Mo steel heat exchangers according to the elevated temperature design codes of ASME Section III Subsection NH and RCC-MR code. Code comparisons were made based on the creep-fatigue damage evaluation and issues on conservatisms of the design codes were discussed.

Postoperative Radiotherapy for Locally Advanced Gastric Cancer (국소적으로 진행된 위암의 수술후 방사선 치료성적)

  • Lee Myung Za;Chun Ha Chung;Kim Insoon;Chung Tejune
    • Radiation Oncology Journal
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    • v.15 no.2
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    • pp.113-119
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    • 1997
  • Purpose : Radical gastrectomy is main treatment of gastric cancer. But the result is not satisfactory with surgery alone. Most of pattern of failure remain locoregional recurrence. To improve 5 year survival postoperative chemotherapy with or without radiotherapy has been used. We analyzed patients with stage III and IV stomach cancer who had radical operation and received postoperative radiation therapy combined with or without chemotherapy retrospectively. Material and Method : From March 1985 to June 1993, 68 patients treated with curative resection and received postoperative adiuvant radiotherapy with 36Gy or more were evaluated. Median age was 60 years(range 28-66 yrs) . Patients were followed from 3 to 133 months with median follow up of 48 months. Thirty seven patients had non signet ring adenocarcinoma, 29 signet ring cell, 2 other cell. Patients with stage IIIA, IIIB, IV disease were 19, 25 and 24 respectively Chemotherapy was given to all patients except two. Results : Five-year overall survival and disease-free survival rate were 36.6% and 33.6%, respectively. Prognostic factor affecting survival were assessed. High ratio of jnvolved/dissected Iymph node, signet ring histology showed Poor Prognosis with statistical significance. Presence of residual tumor after surgery, stageIV. split course of radiation therapy, age, number of involved Iymph node, number of Iymph node dissection and grade of tumor affected survival without statistical significance, Type of chemotherapy did not affect survival. Recurrence was documented in 34 patients. High recurrence was seen in omentum and peritoneum with 23.5%, and remnant stomach, anastomosis site, A-loop and I-loop had also high recurrence with 13.2%. In field locoregional recurrence was 20.7% and total distant metastases were 39.7%. Total intraabdominal failure was 47.1% and extraabdominal failure was 13.2%. Treatment toxicity was considered to be acceptable. 22.1% of patients had grade 3 and only 1 patient had grade 4 leukopenia. Six Patients(8.8%) had weigh loss more than 10%. Conclusion : Treatment toxicity was acceptable with combined treatment with chemotherapy and radiotherapy. Locoregional recurrence was relatively low compared to distant failure with addition of irradiation. Peritoneal and omental seeding was high Five-rear surival was increased with combined modality. Radiation may eradicate minimal residual disease and improve survival, To evaluate role of radiation Prospective randomized study employing chemotherapy alone and chemotherapy plus radiation is necessary. Futhermore to reduce intraabdominal failure, role of intraabdominal chemotherapy in addition to combined chemotherapy plus radiation has to be explored.

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Isolation and Characterization of Calmodulin Gene from Panax ginseng C. A. Meyer

  • Wasnik, Neha G.;Kim, Yu-Jin;Kim, Se-Hwa;Sathymoorthy, S.;Pulla, Rama Krishna;Parvin, Shohana;Senthil, Kalaiselvi;Yang, Deok-Chun
    • Journal of Ginseng Research
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    • v.33 no.1
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    • pp.59-64
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    • 2009
  • $Ca^{2+}$ and calmodulin (CaM), a key $Ca^{2+}$ sensor in all eukaryotes, have been implicated for defense responses of plants. Eukaryotic CaM contains four structurally and functionally similar $Ca^{2+}$ domains named I, II, III and IV. Each $Ca^{2+}$ binding loop consists of 12 amino acid residues with ligands arranged spatially to satisfy the octahedral symmetry of $Ca^{2+}$ binding. To investigate the altered gene expression and the role of CaM in ginseng plant defense system, cDNA clone containing a CaM gene, designated PgCaM was isolated and sequenced from Panax ginseng. PgCaM, which has open reading frame of 450 nucleotides predicted to encode a precursor protein of 150 amino acid residues. Its sequence shows high homologies with a number of other CaMs, with more similarity to CaM of Daucus carota (AAQ63461). The expression of PgCaM in different P. ginseng organs was analyzed using real time PCR. The results showed that PgCaM expressed at different levels in young leaves, shoots, and roots of 3-week-old P. ginseng. In addition, the expressions of PgCaM under different abiotic stresses were analyzed at different time intervals.