• 제목/요약/키워드: High-throughput analysis

검색결과 553건 처리시간 0.026초

Comparative Analysis of Gut Microbial Communities in Children under 5 Years Old with Diarrhea

  • Wen, Hongyu;Yin, Xin;Yuan, Zhenya;Wang, Xiuying;Su, Siting
    • Journal of Microbiology and Biotechnology
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    • 제28권4호
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    • pp.652-662
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    • 2018
  • Diarrhea is a global disease with a high morbidity and mortality rate in children. In this study, 25 fecal samples were collected from children under 5 years old. Seven samples had been taken from healthy children without diarrhea and marked as the healthy control group; eight samples had been sampled from children with diarrhea caused by dyspepsia and defined as the non-infectious group; and ten samples had been taken from children with diarrhea induced by intestinal infections and identified as the infectious group. We detected the microbial communities of samples by using high-throughput sequencing of 16S rRNA genes. The proportion of aerobic and facultative anaerobic microbes in samples of the infectious group was much higher than in the non-infectious group. In addition, the relative abundance of Enterococcus in the healthy control group was significantly higher than in the non-infectious group and infectious group. This can be used as a potential diagnostic biomarker for diarrhea.

CRMA 고속 네트워크를 위한 슬롯 재사용 알고리즘 (Slot Reuse Algorithm for CRMA High Speed Networks)

  • 김성수;이성호;양양규
    • 한국정보과학회:학술대회논문집
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    • 한국정보과학회 2001년도 가을 학술발표논문집 Vol.28 No.2 (3)
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    • pp.160-162
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    • 2001
  • Cyclic-Reservation Multiple-Access(CRMA) is an access scheme for high-speed local and metropolitan area networks based on folded-bus or dual-bus configurations. CRMA provides high throughput and fairness independent of the network speed or distance. This paper describes a simulation-based quantitative analysis of the performance gains obtained by introducing slot reuse in CRMA. Generally, a longer cycle length means a longer access delay and a lower throughput. There-fore, it is desirable to develop a scheme such that the cycle length is the shortest. In this paper, we will study the problem of reducing the total number of empty slots generated within every cycle. However, it has been shown that the problem is NP-complete under the constraint that all empty slots used by a station in a cycle are required to be consecutive. We present the algorithm that improves previous novel approach by using previous node information. We compare our slots reuse scheme with several slot reuse algorithms such as region scheme (FMR), address schemes, novel approach in terms of the following two important performance criteria: average cycle length and average slot utilization ratio. As compared with the one proposed in novel algorithm, the new scheme makes the cycle length much shorter. Besides, the resulting slot utilization and the access delay are better than those of the other two schemes.

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800Gb/s ATM 스위칭 MCM의 성능분석 (Performance Analysis of 800Gb/s ATM Switching MCM)

  • 정운석;김훈;박광채
    • 대한전자공학회:학술대회논문집
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    • 대한전자공학회 2001년도 하계종합학술대회 논문집(1)
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    • pp.155-158
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    • 2001
  • A 640Gb/s high-speed ATM switching system that is based on the technologies of advanced MCM, 0.25um CMOS and optical WDM interconnection is fabricated for future N-ISDN services. A 40 layer, 160mm$\times$114mm ceramic MCM realizes the basic ATM switch module with 80Gbps throughput. The basic unit ATM switch module with 80Gb/s throughput. The basic unit ATM switch MCM consists of in 8 chip advanced 0.25um CMOS VLSI and 32 chip I/O Bipolar VLSIs. The MCM employs an 40 layer, very thin layer ceramic MCM and a uniquely structured closed loop type liquid colling system is adopted to cope with the MCM's high-power dissipation of 230w. The MCM is Mounted on a 32cm$\times$50cm mother board. A three stage ATM switch is realized by optical WDM interconnection between the high-performance MCM.

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Wi-Fi 기반 차량 네트워크에서의 인터넷 처리율 분석 (Throughput Analysis in Vehicular Wi-Fi Networks)

  • 김원중;김영현;윤주상;백상헌
    • 정보처리학회논문지C
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    • 제18C권1호
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    • pp.45-50
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    • 2011
  • 최근 무선 통신의 발달과 무선 접속 기기의 등장으로 인하여 언제, 어디서든 인터넷을 접속하여 다양한 응용 프로그램을 사용할 수 있게 되었다. 특히, 차량 네트워크의 발달로 이동 중인 차량에서도 인터넷 접속이 가능하게 되었다. 또한, 차량 네트워크와 관련된 다양한 연구들이 활발히 진행되고 있다. 본 논문에서는 실제로 쓰이는 다양한 차량 네트워크의 구조를 살펴보고, 각 구조에서 차량 내에서의 Wi-Fi와 외부의 네트워크를 종합적으로 고려하여 성능 측정을 하였다. 성능 측정 결과를 통해서 현재 사용되고 있는 차량 네트워크의 유용성을 판단하였다.

Performance Analysis of Multiple-Hop Wireless Body Area Network

  • Hiep, Pham Thanh;Hoang, Nguyen Huy;Kohno, Ryuji
    • Journal of Communications and Networks
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    • 제17권4호
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    • pp.419-427
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    • 2015
  • There have been increases in the elderly population worldwide, and this has been accompanied by rapid growth in the health-care market, as there is an ongoing need to monitor the health of individuals. Wireless body area networks (WBANs) consist of wireless sensors attached on or inside the human body to monitor vital health-related problems, e.g., electrocardiograms (ECGs), electroencephalograms (EEGs), and electronystagmograms (ENGs). With WBANs, patients' vital signs are recorded by each sensor and sent to a coordinator. However, because of obstructions by the human body, sensors cannot always send the data to the coordinator, requiring them to transmit at higher power. Therefore, we need to consider the lifetime of the sensors given their required transmit power. In the IEEE 802.15.6 standard, the transmission topology functions as a one-hop star plus one topology. In order to obtain a high throughput, we reduce the transmit power of the sensors and maintain equity for all sensors. We propose the multiple-hop transmission for WBANs based on the IEEE 802.15.6 carrier-sense multiple-access with collision avoidance (CSMA/CA) protocol. We calculate the throughput and variance of the transmit power by performing simulations, and we discuss the results obtained using the proposed theorems.

Analyzing the Impact of Buffer Capacity on Crosspoint-Queued Switch Performance

  • Chen, Guo;Zhao, Youjian;Pei, Dan;Sun, Yongqian
    • Journal of Communications and Networks
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    • 제18권3호
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    • pp.523-530
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    • 2016
  • We use both theoretical analysis and simulations to study the impact of crosspoint-queued (CQ) buffer size on CQ switch throughput and delay performance under different traffic models, input loads, and scheduling algorithms. In this paper, we present the following. 1) We prove the stability of CQ switch using any work-conserving scheduling algorithm. 2) We present an exact closed-form formula for the CQ switch throughput and a non-closed-form but convergent formula for its delay using static non-work-conserving random scheduling algorithms with any given buffer size under independent Bernoulli traffic. 3) We show that the above results can serve as a conservative guide on deciding the required buffer size in pure CQ switches using work-conserving algorithms such as the random scheduling, under independent Bernoulli traffic. 4) Furthermore, our simulation results under real-trace traffic show that simple round-robin and random work-conserving algorithms can achieve quite good throughput and delay performance with a feasible crosspoint buffer size. Our work reveals the impact of buffer size on the CQ switch performance and provides a theoretical guide on designing the buffer size in pure CQ switch, which is an important step toward building ultra-high-speed switch fabrics.

Interference-Aware Channel Assignment Algorithm in D2D overlaying Cellular Networks

  • Zhao, Liqun;Wang, Hongpeng;Zhong, Xiaoxiong
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • 제13권4호
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    • pp.1884-1903
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    • 2019
  • Device-to-Device (D2D) communications can provide proximity based services in the future 5G cellular networks. It allows short range communication in a limited area with the advantages of power saving, high data rate and traffic offloading. However, D2D communications may reuse the licensed channels with cellular communications and potentially result in critical interferences to nearby devices. To control the interference and improve network throughput in overlaid D2D cellular networks, a novel channel assignment approach is proposed in this paper. First, we characterize the performance of devices by using Poisson point process model. Then, we convert the throughput maximization problem into an optimal spectrum allocation problem with signal to interference plus noise ratio constraints and solve it, i.e., assigning appropriate fractions of channels to cellular communications and D2D communications. In order to mitigate the interferences between D2D devices, a cluster-based multi-channel assignment algorithm is proposed. The algorithm first cluster D2D communications into clusters to reduce the problem scale. After that, a multi-channel assignment algorithm is proposed to mitigate critical interferences among nearby devices for each D2D cluster individually. The simulation analysis conforms that the proposed algorithm can greatly increase system throughput.

AMC와 MIMO 선택 기법이 결합된 통신 시스템의 설계 및 성능 분석 (Design and Performance Analysis of a Communication System with AMC and MIMO Mode Selection Scheme)

  • 이정환;윤길상;조인식;서창우;셰를리;황인태
    • 대한전자공학회논문지TC
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    • 제47권3호
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    • pp.22-30
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    • 2010
  • 본 논문은 AMC(Adaptive Modulation and Coding)와 MIMO(Multiple Input Multiple Output)를 결합하여 전송률 및 전송 신뢰도 향상을 가져오는 통신 시스템을 구현한다. 또한 Precoding과 Antenna Subset Selection을 효율적으로 적용하고 MIMO 선택 기법을 결합하여, 최종적으로 AMC와 MIMO 선택 기법이 결합된 통신 시스템을 설계하고 성능을 분석한다. 모의 실험 환경은 안테나 간 상관성이 존재하지 않는 주파수비 선택적 레일리 페이딩 채널을 고려하였으며, 확산인자는 16을 적용하였다. 그 외의 여러 모의 실험 환경은 HSDPA(High Speed Downlink Packet Access) 표준에 근거하여 구성하도록 노력하였다. 본 논문에서 제안한 "AMC와 MIMO 선택 기볍이 결합된 시스템"은 기존의 "AMC와 각 MIMO의 결합 시스템들" 보다 높은 보여주었으며, 열악한 채널 환경에서도 안정적인 전송률을 확보해 주었다. 제안된 시스템은 약 8dB에서 최대 전송률을 나타내었으며, 제안된 시스템과 동일한 최대 전송률올 갖눈 기종의 "AMC와 D-STTD $4{\times}2$ 결합 시스템"과 비교하였을 때 약 6dB 정도 먼저 최대 전송률을 나타냈다. 또한 최대 전송률에 이르기 전까지 거의 모든 SNR(Signal to Noise Ratio)서 기존의 시스템보다 약 2배 정도 높은 전송률을 보였다. 구체적으로 SNR이 2dB인 지점에서 기존의 시스템은 약 2.5Mbps의 전송률을 나타냈으며, 제안된 시스템은 그 2배가 넘는 약 6.4MBps의 전송률을 나타냈다. 또한 SNR이 2dB인 지점에서는 각각 약 7.5Mbps와 15.3Mbps의 전송률을 나타내어 역시 2배에 가까운 차이가 나는 것을 확인할 수 있었다. 제안된 시스템은 AMC 기법을 사용하는 주 목적인 전송률의 향상에 크게 기여하였으며, 특히 평균 전송률의 향상에 효과적임을 확인하였다.

Development of Realtime GRID Analysis Method based on the High Precision Streaming Data

  • Lee, HyeonSoo;Suh, YongCheol
    • 한국측량학회지
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    • 제34권6호
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    • pp.569-578
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    • 2016
  • With the recent advancement of surveying and technology, the spatial data acquisition rates and precision have been improved continually. As the updates of spatial data are rapid, and the size of data increases in line with the advancing technology, the LOD (Level of Detail) algorithm has been adopted to process data expressions in real time in a streaming format with spatial data divided precisely into separate steps. The existing GRID analysis utilizes the single DEM, as it is, in examining and analyzing all data outside the analysis area as well, which results in extending the analysis time in proportion to the quantity of data. Hence, this study suggests a method to reduce analysis time and data throughput by acquiring and analyzing DEM data necessary for GRID analysis in real time based on the area of analysis and the level of precision, specifically for streaming DEM data, which is utilized mostly for 3D geographic information service.

Quantitative Analysis of Nucleic Acids - the Last Few Years of Progress

  • Ding, Chunming;Cantor, Charles R.
    • BMB Reports
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    • 제37권1호
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    • pp.1-10
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    • 2004
  • DNA and RNA quantifications are widely used in biological and biomedical research. In the last ten years, many technologies have been developed to enable automated and high-throughput analyses. In this review, we first give a brief overview of how DNA and RNA quantifications are carried out. Then, five technologies (microarrays, SAGE, differential display, real time PCR and real competitive PCR) are introduced, with an emphasis on how these technologies can be applied and what their limitations are. The technologies are also evaluated in terms of a few key aspects of nucleic acids quantification such as accuracy, sensitivity, specificity, cost and throughput.