• 제목/요약/키워드: High resolution mass spectrometry

검색결과 122건 처리시간 0.029초

질량분석기를 활용한 효과적 이황화결합 분석법 개발 (Mass Spectrometry-Based Strategy for Effective Disulfide Bond Identification)

  • 진종화;민호필;권오승;오현정;김종원;박철환
    • Korean Chemical Engineering Research
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    • 제55권1호
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    • pp.27-33
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    • 2017
  • 이황화결합(Disulfide Bond)은 다양한 생리학적 혹은 병리학적 과정 중 단백질번역 후 변형(Post-Translational Modifications) 과정 중에 형성된다. 그러므로 이황화결합에 대한 정보는 단백질의 화학적 구조를 보다 종합적으로 이해하는데 매우 중요한 일이다. 질량분석기를 이용한 이황화결합 분석은 매우 효과적이며, 현재까지 질량 분석기를 활용한 다양한 이황화결합 분석법들이 개발되었다. 그러나, 대부분의 이황화결합 분석법의 경우, 이황화결합 분석 시 자유-시스테인잔기(Free Thiol Residues) 분석을 고려하지 않았다. 본 연구에서는 이황화결합에 관여하는 시스테인/자유-시스테인에 초점을 두고 총 4단계(1단계: 아미노산 서열을 통한 이황화결합 가능 부위를 예측, 2단계: 자유시스테인의 존재 유무의 확인, 3단계: 질량 분석기를 활용한 이황화결합 분석, 4단계: 이황화결합 분석법의 종합적인 검증)의 분석법을 개발하였다. 나아가, 본 연구에서 개발된 분석 기법을 실제 휴먼 유래 재조합 단백질(HRPE1)에 적용함으로써 개발된 이황화결합 분석법의 효용성을 확인하였다. HRPE1의 경우, 총 6개의 이황화결합(Inter-chain 형태: 1, Intra-chain 형태: 5)으로 구성된 것을 최종 확인하였다.

도심 지역의 다이옥신류 폴리염화비페닐류의 침적 플럭스 (Deposition flux of dioxin-like polychlorinated biphenyls(DLPCBs) in urban environment of Busan)

  • 문효방;이수정;최희구;옥곤
    • 한국환경과학회지
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    • 제13권5호
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    • pp.469-478
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    • 2004
  • Atmospheric bulk (wet and dry) samples were monthly collected in an urban environment (Daeyeon-dong) of Busan over a year, to assess the deposition flux and seasonality of dioxin-like polychlorinated biphenyls (DLPCBs) using stainless steel pots. Deposition fluxes of DLPCBs in bulk samples were determined using high resolution gas chromatography coupled to high resolution mass spectrometry (HRGC/HRMS). Particle deposition fluxes in the urban environment varied from 23 to 98 $mg^2$/year (mean 41 $gm^2$/year). DLPCB deposition fluxes in atmospheric bulk samples ranged from 0.09 to 0.77 ng-$TEQ/m^2$/year (mean 0.35 ng-$TEQ/m^2$/year). Seasonal atmospheric deposition fluxes of DLPCBs were high in winter and low in summer. Atmospheric deposition fluxes of particles and DLPCBs in this study were comparable to or slightly lower values than those of different locations in the world. Monthly DLPCB profiles in deposition bulk samples were similar over a year. Non-ortho PCBs were higher contributions to the total DLPCBs fluxes than mono-ortho PCBs. In particular, PCB 126 had the highest concentrartion (>75%) in all deposition samples, followed by PCB 169 and PCB 156. A highly positive correlation was found among the deposition fluxes of DLPCB species, suggesting the possibility of that the DLPCB contamination originated from one source. The deposition fluxes of DLPCBs were not significantly correlated with temperature and the amount of precipitation even though the summer season with the highest temperature and the largest amount of precipitation showed the lowest DLPCB deposition flux.

축산물 사료중의 Polybrominated Diphenyl Ethers(PBDEs) 평가 (Levels of PBDEs in Pig Feed)

  • 신정화;안윤경
    • 한국지역사회생활과학회지
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    • 제23권3호
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    • pp.255-263
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    • 2012
  • Polybrominated diphenyl ethers (PBDEs) are a group of brominated flame retardants (BFRs), which are used in a variety of consumer products. Several of those are produced in large quantities. Their chemical structure similarities to polychlorinated dibenzo-p-dioxins and polychlorinated biphenyls (PCBs), as well as their toxicity, has been studied. PBDEs are persistent and lipophilic, which results in their bioaccumulation in the fatty tissues of organisms and enrichment throughout food chains. In addition, a number of studies also reported high levels of PBDEs in animals and food resulting from the use of contaminated animal feed Public concern about PBDEs levels in animals and food has been raised. Feed contamination by toxic chemicals has been the cause of the contamination of poultry products. The purpose of this study was to evaluate PBDEs in pig feed to search the origin chase of POPs in pigs. Feed samples were obtained wheat from East Europe, corn from South America and America, soybean meal from Korea, America, South America and India and tallow from Korea. The preparation of samples was based on the EPA method 1614. Instrumental analysis was based on the use of high resolution gas chromatography coupled to high resolution mass spectrometry (HRGC/HRMS). Quantification was carried out by the isotopic dilution method. The analysis of ${\Sigma}PBDEs$ involved 22 PBDE congeners, including BDE-17, 28, 47, 49, 66, 71, 77, 85, 99, 100, 119, 126, 138, 153, 154, 156, 183, 184, 190, 191, 196 and 197.

돼지사료 중의 다이옥신 잔류 평가 (Evaluation for Concentration of Residual PCDD/Fs in Pig Feed)

  • 안윤경;신정화
    • 한국지역사회생활과학회지
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    • 제23권2호
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    • pp.129-136
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    • 2012
  • Dioxins are chemical substances that are not properly decomposed degradation under natural photochemical, biological and chemical conditions in the environment, and bio-accumulate through the food chain, so pose a risk of causing adverse effects to human health and the environment. Ninety seven percent of human exposure to dioxins comes through meat, fish, dairy consumption and so on. Pork is the largest proportion meat aspect of daily intake in the Korean food. Pigs are three times more than Cattle in terms of breeding population and production amount in the world, and the amount is increasing every year. Therefore, it is necessary to monitor the exposure level of dioxins in pig's body. Also, it is required to evaluate the presence of these chemical substances in the pig's feed grain such as corn, soybeans, and tallow. The purpose of this study was to evaluate PCDD/Fs in pig's feed to search the origin of PCDD/Fs. Feed samples obtained were wheat from East Europe, corn from South America and America, soybean meal from Korea, America, South America and India and tallow from Korea. The preparation of samples was based on the EPA method 1613. Instrumental analysis was based on the use of high resolution gas chromatography coupled to high resolution mass spectrometry (HRGC/HRMS). The concentrations of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) and 1,2,3,7,8-pentachlorodibenzo-p-dioxin (PCDD), which are the most toxic potent dioxins, were not observed in any of the samples. However OCDD was detected in most of the samples. The TEQs in the feed samples were ranged from 0 pg TEQ/g to 0.09841 pg TEQ/g. Especially, the high level of TEQs was observed in the samples of wheat from East Europe and soybean meal from Korea.

Antibacterial Effect of Fructose Laurate Synthesized by Candida antarctica B Lipase-Mediated Transesterification

  • Lee, Ki Ppeum;Kim, Hyung Kwoun
    • Journal of Microbiology and Biotechnology
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    • 제26권9호
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    • pp.1579-1585
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    • 2016
  • Sugar esters are valuable compounds composed of various sugars and fatty acids that can be used as antibacterial agents and emulsifiers in toothpaste and canned foods. For example, fructose fatty acid esters suppress growth of Streptococcus mutans, a typical pathogenic bacterium causing dental caries. In this study, fructose laurate ester was chosen as a target material and was synthesized by a transesterification reaction using Candida antarctica lipase B. We performed a solvent screening experiment and found that a t-butanol/dimethyl sulfoxide mixture was the best solvent to dissolve fructose and methyl laurate. Fructose laurate was synthesized by transesterification of fructose (100 mM) with methyl laurate (30 mM) in t-butanol containing 20% dimethyl sulfoxide. The conversion yield was about 90%, which was calculated based on the quantity of methyl laurate using high-performance liquid chromatography. Fructose monolaurate (Mr 361) was detected in the reaction mixture by high-resolution mass spectrometry. The inhibitory effect of fructose laurate on growth of oral or food spoilage microorganisms, including S. mutans, Bacillus coagulans, and Geobacillus stearothermophilus, was evaluated.

LC-HRMS 기반의 표적, 추정 및 비표적 분석기법을 이용한 화포습지 내 미량오염물질 및 대사체 분석 (Analysis of Micropollutants and Their Metabolites in the Hwapo Wetland through Target, Suspect, and Non-target Screening Using LC-HRMS)

  • 황수민;전준호
    • 환경분석과 독성보건
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    • 제21권4호
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    • pp.304-315
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    • 2018
  • Located in Gimhae, Hwapo is the biggest riverine wetland in the province of Gyeongsangsam-do, Korea, and is a major habitat for various species. However, it is suspected that various pollutants enter the wetlands from agricultural and industrial areas. This study identifies major organic pollutants in this wetland and their sources using high performance liquid chromatography-high resolution mass spectrometry during one summer season. Forty-five substances were selected for quantitative analysis using target screening, and other non-selected compounds were screened using suspect and non-target screening methods. The results were that 21 and 17 targeted substances were detected in July and August, respectively. Major pollutants in July and August were oxadiazon (July: 17-220 ng/L, August: 66-460 ng/L), carbendazim (July: 10-110 ng/L, August: 64-520 ng/L), caffeine (July: 33-1,100 ng/L, August: 56-580 ng/L), and niflumic acid (July: 23-75 ng/L, August: 42-290 ng/L). Sampling sites S4 in July and S2 in August were the major inflow points. Ten substances (tricyclazole, hexaconazole, diuron, fexofenadine, irbesartan, simetryn, cimetidine, valsartan, tebuconazole, and benzotriazole) and four metabolites (valsartan acid, azoxystrobin acid, TEB_M324c, and 2-aminobenzimidazole) were tentatively identified through suspect and non-target screening, respectively.

동위원소희석법 HRGC/HRMS에 의한 식품 중 Co-planar PCBs 분석 (Analyzing Co-planar PCBs in Food by HRGC/HRMS with Isotopic Dilution Method)

  • 최동미;서정혁;김민정;홍무기;김창민;송인상
    • 분석과학
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    • 제16권4호
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    • pp.325-332
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    • 2003
  • 고분해능질량분석기를 이용한 동위원소희석법으로 식품 중 co-planar PCBs의 분석을 시도하였다. 시료를 균질화하여 추출 후 실리카겔 및 알루미나 컬럼으로 정제를 하여 HRGC/HRMS로 분리능 10,000에서 분석하였다. 대상물질은 세계보건기구인 WHO에서 다이옥신류와 유사한 독성이 있다고 평가한 non-ortho co-planar PCB #77, #81, #126 및 #169 4종 및 mono-ortho coplanar PCBs #105, #114, #118, #123, #156, #157, #167 및 #189 8종을 포함한 12종 이었다. 대상시료는 시중에 유통 중인 우유 및 유제품을 선택하였다. 분석 결과 평균 회수율은 83~106%이었고 검출한계는 신호대잡음비 (signal/noise, S/N) >3에서 0.1 pg/g이었으며 식품시료 중 검출된 대상물질은 0.001~0.107 pgWHO-TEQ/g 수준이었다.

온라인 시료주입과 UPLC-Orbitrap 질량분석법을 이용한 수질 조류독소의 고속분석방법 개발 및 환경시료적용 (Fast and Accurate Determination of Algal Toxins in Water using Online Preconcentration and UPLC-Orbitrap Mass Spectrometry)

  • 장제헌;김윤석;최재원
    • 한국물환경학회지
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    • 제28권6호
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    • pp.843-850
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    • 2012
  • Due to the fast response to algae bloom issue in drinking water treatment plant, very fast determination methodology for algal toxin is required. In this study, column switching technique based online preconcentration method was combined with high resolution full scan mass spectrometer to save sample preparation time and to obtain fast and accurate result. After parameter optimization of online preconcentration, 1mL filtered sample was directly injected to trap column with switching valve system. Next, target toxins are eluted by 98% acetonitrile and analysed with 150 - 1,100 amu scan range at 50,000 resolving power. Method detection limit (MDL) for microcystin-LR, the most toxic isomer, was 0.1 ng/mL and others such as microcystin-YR, microcystin-RR and nodularin were 0.08, 0.03 and 0.04 ng/mL, respectively. This is the best improved sensitivities with 1mL volume in the literature. Furthermore, due to the use of ultra pressure HPLC (UPLC), the whole method run was completed in 4 min. Real sample applications for 173 sample including 55 surface water and 118 treatment plant samples for raw and treated water could be done within 16 hours. In our calculation, this methodology is roughly 80% faster than the previous manual solid-phase extraction with LC-MS/MS method.

Isolation and Identification of Newly Isolated Antagonistic Streptomyces sp. Strain AP19-2 Producing Chromomycins

  • Wu, Xue-Chang;Chen, Wei-Feng;Qian, Chao-Dong;Li, Ou;Li, Ping;Wen, Yan-Ping
    • Journal of Microbiology
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    • 제45권6호
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    • pp.499-504
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    • 2007
  • A new antagonistic strain of actinomycete, designated AP19-2, was isolated from the feces of giant pandas inhabiting the Foping National Nature Reserve in China. Cultural characteristic studies strongly suggested that this strain is a member of the genus Streptomyces. The nucleotide sequence of the 16S rRNA gene of strain AP19-2 evidenced profound similarity (97-99 %) with other Streptomyces strains. Two pure active molecules were isolated from a fermentation broth of Streptomyces sp. strain AP19-2 via extraction, concentration, silica gel G column chromatography, and HPLC. The chemical structures of the two related compounds (referred to as chromomycin $A_2$ and chromomycin $A_3$) were established on the basis of their Infrared spectra (IR), High Resolution Electrospray Ionization Mass Spectrometry (HR-ESI-MS), and Nuclear Magnetic Resonance (NMR) data, and by comparison with published data.

디젤-분무 수소-공기 확산화염에서 생성된 철-함유 탄소입자의 촉매 산화반응 특성 (Catalytic oxidation kinetics of iron-containing carbon particles generated from diesel-sprayed hydrogen-air diffusion flame)

  • 김용호;김용태;김수형;이동근
    • 한국입자에어로졸학회지
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    • 제4권2호
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    • pp.51-67
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    • 2008
  • In this study, we devoted to kinetic measurement of the catalytic oxidation of iron-containing flame soot particles and better understanding the role of catalytic particles on carbon oxidation in particular at low temperature, targeting on autothermal regeneration of diesel particulate filter by diesel exhaust gas. Carbon-based Fe-containing particles generated by spraying ferrocene-doped diesel fuel in an oxy-hydrogen flame are tested and compared with a commercial carbon black powder for thermogravimetric analysis (TGA), secondary ion mass spectrometry (SIMS), Fourier-transform infrared spectroscopy (FTIR), Induced coupled plasma-Atomic emission spectroscopy (ICP-AES), and High-resolution transmission electron microscopy (HR-TEM). As a result, we found that a small amount of the ferrocene addition led to significant reductions in a on-set temperature and an activation energy of the carbon oxidation as well. An oxygenated surface complex forming at the particle surface could be thought as active species that would be readily consumed in particular at low temperature.

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