• Title/Summary/Keyword: HABs

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Methods for sampling and analysis of marine microalgae in ship ballast tanks: a case study from Tampa Bay, Florida, USA

  • Garrett, Matthew J.;Wolny, Jennifer L.;Williams, B. James;Dirks, Michael D.;Brame, Julie A.;Richardson, R. William
    • ALGAE
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    • v.26 no.2
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    • pp.181-192
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    • 2011
  • Ballasting and deballasting of shipping vessels in foreign ports have been reported worldwide as a vector of introduction of non-native aquatic plants and animals. Recently, attention has turned to ballast water as a factor in the global increase of harmful algal blooms (HABs). Many species of microalgae, including harmful dinoflagellate species, can remain viable for months in dormant benthic stages (cysts) in ballast sediments. Over a period of four years, we surveyed ballast water and sediment of ships docked in two ports of Tampa Bay, Florida, USA. Sampling conditions encountered while sampling ballast water and sediments were vastly different between vessels. Since no single sample collection protocol could be applied, existing methods for sampling ballast were modified and new methods created to reduce time and labor necessary for the collection of high-quality, qualitative samples. Five methods were refined or developed, including one that allowed for a directed intake of water and sediments. From 63 samples, 1,633 dinoflagellate cysts and cyst-like cells were recovered. A native, cyst-forming, harmful dinoflagellate, Alexandrium balechii (Steidinger) F. J. R. Taylor, was collected, isolated, and cultured from the same vessel six months apart, indicating that ships exchanging ballast water in Tampa Bay have the potential to transport HAB species to other ports with similar ecologies, exposing them to non-native, potentially toxic blooms.

Lessons from the Sea : Genome Sequence of an Algicidal Marine Bacterium Hahella chehuensis (적조 살상 해양 미생물 Hahella chejuensis의 유전체 구조)

  • Jeong Hae-Young;Yoon Sung-Ho;Lee Hong-Kum;Oh Tae-Kwang;Kim Ji-Hyun
    • Microbiology and Biotechnology Letters
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    • v.34 no.1
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    • pp.1-6
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    • 2006
  • Harmful algal blooms (HABs or red tides), caused by uncontrolled proliferation of marine phytoplankton, impose a severe environmental problem and occasionally threaten even public health. We sequenced the genome of an EPS-producing marine bacterium Hahella chejuensis that produces a red pigment with the lytic activity against red-tide dinoflagellates at parts per billion level. H. chejuensis is the first sequenced species among algicidal bacteria as well as in the order Oceanospirillales. Sequence analysis indicated a distant relationship to the Pseudomonas group. Its 7.2-megabase genome encodes basic metabolic functions and a large number of proteins involved in regulation or transport. One of the prominent features of the H. chejuensis genome is a multitude of genes of functional equivalence or of possible foreign origin. A significant proportion (${\sim}23%$) of the genome appears to be of foreign origin, i.e. genomic islands, which encode genes for biosynthesis of exopolysaccharides, toxins, polyketides or non-ribosomal peptides, iron utilization, motility, type III protein secretion and pigment production. Molecular structure of the algicidal pigment was determined to be prodigiosin by LC-ESI-MS/MS and NMR analyses. The genomics-based research on H. chejuensis opens a new possibility for controlling algal blooms by exploiting biotic interactions in the natural environment and provides a model in marine bioprospecting through genome research.

Size and Species Composition of Phytoplankton Related to Anthropogenic Environmental Changes in Doam Bay (인위적 담수 유입에 의한 도암만의 환경변화와 식물플랑크톤 변동)

  • Yang, Eeng-Ryul;Jeong, Byung-Kwan;Lee, Eo-Jin;Ryu, Dong-Ki;Shin, Yong-Sik
    • Journal of Environmental Science International
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    • v.23 no.6
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    • pp.1183-1197
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    • 2014
  • Doam Bay is an estuary where harmful algal blooms (HABs) such as red tides develop frequently in summer. The bay also is influenced by freshwater inflow from Tamjin River in upper regions as well as from an artificial lake in lower regions. Phytoplankton size and species composition were investigated at six stations located in the lower regions in April, June and July, 2007. Physical properties (temperature, salinity and SS) were intensively measured for 3 days (5 occasions) after the freshwater discharges from the dike. The freshwater discharge affected temperature, salinity and turbidity in the study sites adjacent to the freshwater lake. Phytoplankton biomass was larger in April than June and it increased more in July. An explicit shift of species composition was observed. Diatoms were dominant in April and June (>70%) whereas their abundances greatly decreased and chlorophytes increased in July. Pseudo-nitzschia sp. was dominant at all stations (except St. 2) and this change was also detected in ecological indices such as diversity and dominance index.

Effects of Water Temperature, Salinity and Irradiance on the Growth of the Harmful Algae Chattonella marina (Subrahmanyn) Hara et Chihara (Raphidophyceae) Isolated from Gamak Bay, Korea (가막만에서 분리한 유해성 침편모조류 Chattonella merina (Subrahmanyn) Hara et Chihara (Raphidophyceae)의 성장에 미치는 수온, 염분 및 빛의 영향)

  • Noh, Il-Hyeon;Yoon, Yang-Ho;Kim, Dae-Il;Oh, Seok-Jin
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.39 no.6
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    • pp.487-494
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    • 2006
  • The effects of water temperature, salinity and irradiance on the growth of harmful algae Chattonella marina isolated from Gamak Bay in South Sea, Korea were investigated. C. marina was able to grow in temperatures of $15-30^{\circ}C$ and salinities of 10-35 psu. Maximum specific growth rate (0.64/day) was observed with combination of $25^{\circ}C$ and 25 psu. Optimal growth (${\ge}70%$ of maximum specific growth rate) was obtained with all salinities of the above $20^{\circ}C$. This result indicated that C. marina is a stenothermal of the high water temperature and euryhaline organism. C. marina was did not grow at irradiance ${\le} 10{\mu}mol$ photons/($m^2\;s$). Photoinhibition did not occur at $300{\mu}mol$ photons/($m^2\;s$), which was the maximum irradiance used in this study. The irradiance-growth curve was described as ${\mu}=0.78(I-11.4)/(I+34.1)$ at $25^{\circ}C$ and 25 psu. The half-saturation photon flux density (PFD) ($K_s$) was $56.9{\mu}mol$ photons/($m^2\;s$) and compensation PFD ($I_c$) was $11.4{\mu}mol$ photons/($m^2\;s$). The result of the present study indicate that C. marina has advantage physiological characteristic to the interspecific competition at the embayment and costal areas of South and West Sea, Korea in summer.

New Algicidal Compounds from a Marine Algicidal Bacterium against Cochlodinium polykrikoides

  • Jeong, Seong-Yun;Kim, Min-Ju;Lee, Sang-Youb;Son, Hong-Joo;Lee, Sang-Joon
    • Proceedings of the Korean Environmental Sciences Society Conference
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    • 2006.11a
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    • pp.285-289
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    • 2006
  • In screening of algicidal bacteria, we isolated a marine bacterium which had potent algicidal effects on harmful algal bloom (HAB) species. This organism was identified as a strain very close to Bacillus subtilisby 16S rRNA gene sequencing. This bacterium, Bacillus sp. SY-1, produces very active algicidal compounds against the harmful dinoflagellate Cochlodinium polykrikoides. We isolated three algicidal compounds (MS 1056, 1070, 1084) and identified them by amino acid analyses, fast atom bombardment mass spectrometry (FAB-MS), infrared spectroscopy (IR), $^1H$, $^{13}C$, and extensive two-dimensional nuclear magnetic resonance (2D NMR) techniques including $^1H-^{15}N$ HMBC analysis. One of them, MS 1056, contains a b-amino acid residue with an alkyl side chain of $C_{15}$. MS 1056, 1070, and 1084 showed algicidal activities against C. polykrikoides with an $LC_{50}$ (6 hrs) of 2.3, 0.8, $0.6\;{\mu}g/ml$, respectively. These compounds also showed significant algicidal activities against other harmful dinoflagellates and raphidophytes. In contrast, MS 1084 showed no significant growth inhibition against various organisms coexisting with HAB species in natural environments, including bacteria, eukaryotic microalgae, and cyanobacteria, although it inhibited growth of some fungi and yeasts. These observations imply that algicidal bacterium Bacillus sp. SY-1 and its algicidal compounds could play an important role in regulating the onset and development of HABs in the natural environments.

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Effect of Salinity and Micronutrients on the Growth Rate of Bloom from Heterosigma akashiwo (Raphidophyceae) (염분과 미량원소가 Heterosigma akashiwo (Raphidophyceae) 성장률에 미치는 영향)

  • Lee, Juyun;Chang, Man;Han, Myung-Soo
    • Korean Journal of Environmental Biology
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    • v.32 no.2
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    • pp.129-137
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    • 2014
  • In order to understand the Heterosigma akashiwo (Raphidophyceae) bloom, we investigated the cell division pattern of its strains under various physicochemical conditions from three different origin. Among the three tested strains, HYM06HA and NFHTS-AK-1, are belong to South Korea and CCMP452 strain was from USA. Interestingly among three strains, HYM06HA was established from the cyst in Korea. Our study results showed that these three strains were indistinguishable under various salinity and iron (Fe) conditions. All strains were survived at 10 to 40 psu and the growth patterns under different iron (Fe) concentrations were observed to be similar. The growth patterns under different N:P ratios and selenium (Se) concentrations led to classification of strains into Korean and USA strain. Briefly these results indicated that the growth pattern from different strains of H. akashiwo could be dominant using their salinity tolerance. Furthermore nutritional enhancer seemed to be different based on geographical origin.

Phytoplankton Ecosystems at Oil Spill Coasts Including the Hebei Spirit Oil Spill Site Near Taeanhaean National Park, Korea 1. Interannual Variability of Phytoplankton Community in Summer (태안해안국립공원 인근의 허베이스피리트 사고를 포함한 유류유출 해역의 식물플랑크톤 생태계 1. 하계 식물플랑크톤 군집의 연변동)

  • Yih, Wonho;Kim, Hyung Seop;Jo, Soo-Gun
    • Ocean and Polar Research
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    • v.41 no.1
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    • pp.1-10
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    • 2019
  • Right after the 2007 Hebei Spirit Oil Spill phytoplankton ecosystems were investigated for 11 years based on the seasonal monitoring of the composition and abundance of phytoplankton species. Comparable time-series data from the 1989 Exxon Valdez or the 2010 Deepwater Horizon Oil Spill sites were not available. It was suggested that the ecological healthiness of phytoplankton ecosystems at EVOS sites had recovered after 10 years following the oil spill based on chlorophyll concentrations even though these concentrations only represented phytoplankton communities in most cases. Chlorophyll concentrations can only reflect limited aspects of highly complex phytoplankton ecosystems. During the last 11 years following the 2017 HSOS, extreme variabilities were met in the seasonally averaged ratios of diatoms to phototrophic flagellates including dinoflagellates based on the microscopic cell countings. Summer phytoplankton communities exhibited some cyclic interannual changes in dominant groups every 2-4 years. During the early years (2008-2010) cryptophytes or raphidophytes (Chattonella spp.) dominated alternately each year, which was repeated again in 2014, 2015 and 2017. Two thecate dinoflagellates, Tripos fusus and Tripos furca, together accounted for 52.5% and 50.0% of all organisms in the summers of 2011 and 2012, respectively, which was repeated again in 2018. Summer occurrence and dominance by the phototrophic flagellates including HABs (Harmful Algal Blooms) species as well as their interannual variabilities in the oil spill sites could be utilized as markers for the stable and long-term management of healthy ecosystems. For this type of scientific ecosystem management monitoring of chlorophyll concentrations may sometimes be insufficient to gain a proper and comprehensive understanding of phytoplankton communities located in areas where oil spills have occurred and harmed the ecosystem.

A study on the Heritage Documentation Programs of the United States (미국 문화유산 기록화 프로그램에 관한 연구)

  • Choi, Sun-young;Lee, Seung-hwi
    • The Korean Journal of Archival Studies
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    • no.49
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    • pp.77-119
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    • 2016
  • A modern architectural building is a cultural heritage, which is also part of our history until the present. Documentation is thus considered an irreplaceable method to preserve our cultural heritage as it may be the last resort of preservation. The study analyzed the Historic American Buildings Survey (HABS) on the Heritage Documentation Programs of the National Park Service. Based on the analysis of the comparison and documentation of the modern architectural building implemented by the Cultural Heritage Administration, the study suggested improvement plans from three different perspectives. First, specifically detailed regulations of the legal system are supposed to be used for the implementation of the documentation of modern architectural buildings. Second, it is suggested that a general plan for continuous documentation be made. Last, by setting up a collection method, an information service needs to be provided for the public.

The Americanization of a Canadian National Icon Anne of Green Gables (캐나다의 국가적 아이콘 『빨강머리 앤』의 미국화)

  • Kang, Suk Jin
    • Journal of English Language & Literature
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    • v.54 no.4
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    • pp.561-577
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    • 2008
  • L.M. Montgomery's Anne of Green Gables is not only confidently labelled a Canadian classic but also placed as a national icon along with the moose, the beaver, and the Habs in Canada. Anne's 'Canadianness' is partly due to its location in the rural world of Prince Edward Island. The fictional Avonlea is described as the ideal space where Canadian spirit can interact with the personified surrounding landscapes through Celtic imagination. Additionally, the communal bond of Avonlea fully demonstrates Scottish Canadian identities. The Scottish national character of Avonlea is responsible for clannishness of the Cuthberts and the Lyndes. The disrespect to the French is also due to Scottish heritage in Avonlea. As an outsider Anne wants to be integrated into the community of Avonlea, and successfully adapts herself to the regional shared values. Meanwhile she partly challenges the strictness and rigidness of the born Canadian Avonlea residents. Despite its Canadian origin, Anne of Green Gables is accepted as part of the American canon of children's literature in the Unite States. The configuration of Anne as an American heroine is noticeable among American scholars: by relocating it to the US the female Bildungsroman in the nineteenth century America, a group of literary critics adapt Anne as an American girl for American readers. The heroine of Anne of Green Gables is linked to American novels such as Louisa May Alcott's Little Women, Kate Douglas Wiggin's Rebecca of Sunnybrook Farm and Gene Stratten Porter's A Girl of the Limberlost. Anne is even classified as another Caddie by American literary critics: Anne is placed at the center of Caddie Woodlawn Syndrome as another Wisconsin pioneer child. Canadian identity of Anne is intentionally excluded and Anne was reborn as an American girl in the U.S. In this context, Anne functions as a sign of nation and a site for cross-national identity formation.

Prediction of harmful algal cell density in Lake Paldang using machine learning (머신러닝을 활용한 팔당호 유해남조 세포수 예측)

  • Seohyun Byeon;Hankyu Lee;Jin Hwi Kim;Jae-Ki Shin;Yongeun Park
    • Proceedings of the Korea Water Resources Association Conference
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    • 2023.05a
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    • pp.234-234
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    • 2023
  • 유해 남조 대발생(Harmful Algal blooms, HABs)이 담수호에 발생하면 마이크로시스틴과 같은 독성물질과 맛·냄새 물질을 생성하여 상수원이용과 친수활동을 방해한다. 그래서 유해 남조 대발생 전 유해남조 세포수를 예측하여 선제적 대응하는 것은 중요하다. 따라서 본 연구는 머신러닝기반 Random Forest(RF)를 활용하여 팔당댐 앞의 유해남조 세포수를 예측하는 모델을 개발하고 성능을 평가하고자 한다. 모델 구축을 위해 2012년 4월부터 2021년 12월까지의 팔당호(삼봉리, 경안천) 및 남북한강(의암댐~이포보)권역의 조류, 수질, 수리/수문, 기상 자료를 수집하여 입력 및 출력 자료로 이용하였다. 수집된 데이터에는 다양한 입력변수들이 있어 남조 세포수 예측 성능 비교를 위한 전체 26개 변수 적용과 통계학적으로 상관관계가 높은 12개 변수 적용을 통해 모델을 구축하였다. 입력, 출력 자료로 이용한 유해남조 세포수는 로그변환된 값으로 사용하였으며 일반적인 조류 시료 채취기간이 7일이므로 7일 후를 예측하기 위한 모델을 구축하였다. 구축한 모델의 성능은 실측데이터와 예측데이터의 R2로 산출하여 평가하였다. 전체 26개 입력변수로 모델 구축 후 학습 및 검증 수행 결과 R2의 학습 0.803, 검증 0.729로 나타났고, 유해남조 세포수와 유의미한 상관관계를 보이는 12개 입력변수로 모델 구축 후 학습 및 검증 수행 R2은 학습 0.784, 검증 0.731로 나타났다. 두 모델의 성능을 살펴본 결과 입력변수 개수의 변화에 따른 성능차이는 크지 않은 것으로 나타났으며, 남조세포수 예측을 위한 모델로서 활용가능함을 알 수 있었다. 향후 연구에서는 Random Forest 외 다른 기계학습 모델들과 딥러닝 모델을 통해 남조세포수 예측 성능이 높은 모델을 구축해볼 필요성이 있다.

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