• 제목/요약/키워드: H II region

검색결과 271건 처리시간 0.028초

Cloning and Characterization of Cellulase Gene (cel5B) from Cow Rumen Metagenome

  • Kang, Tae-Ho;Kim, Min-Keun;Barman, Dhirendra Nath;Kim, Jung-Ho;Kim, Hoon;Yun, Han-Dae
    • 농업생명과학연구
    • /
    • 제46권2호
    • /
    • pp.129-137
    • /
    • 2012
  • A carboxymethyl cellulase gene, cel5B, was cloned, sequenced, and expressed in Escherichia coli. pRCS20 in E. coli was identified from metagenomic cosmid library of cow rumen for cellulase activity on a carboxymethyl cellulose agar plates. Cosmid clone (RCS20) was partially digested with Sau3AI, ligated into BamHI site of pBluescript II SK+ vector, and transformed into E. coli $DH5{\alpha}$. The insert DNA of 1.3 kb was obtained, designated cel5B, which has the activity of hydrolyzation of CMC. The cel5B gene had an open reading frame (ORF) of 1,059 bp encoding 352 amino acids with a signal peptide of 48 amino acids and the conserved region, VIYEIYNEPL, belongs to the glycosyl hydrolase family 5. The molecular mass of Cel5B protein expressed from E. coli $DH5{\alpha}$ exhibited to be about 34 kDa by CMC-SDS-PAGE. The optimal pH was 8.0, and the optimal temperature was about $50^{\circ}C$ for its enzymatic activity.

Incidence of Alternaria Species Associated with Watermelon Leaf Blight in Korea

  • Kwon, Oh-Kyu;Jeong, A-Ram;Jeong, Yong-Jik;Kim, Young-Ah;Shim, Jaekyung;Jang, Yoon Jeong;Lee, Gung Pyo;Park, Chang-Jin
    • The Plant Pathology Journal
    • /
    • 제37권4호
    • /
    • pp.329-338
    • /
    • 2021
  • Alternaria leaf blight is one of the most common diseases in watermelon worldwide. In Korea, however, the Alternaria species causing the watermelon leaf blight have not been investigated thoroughly. A total of 16 Alternaria isolates was recovered from diseased watermelon leaves with leaf blight symptoms, which were collected from 14 fields in Korea. Analysis of internal transcribed spacer (ITS) region, glyceraldehyde-3-phosphate dehydrogenase (GAPDH), and RNA polymerase II second largest subunit (RPB2) were not competent to differentiate the Alternaria isolates. On the contrary, analysis of amplicon size of the histone H3 (HIS3) gene successfully differentiated the isolates into three Alternaria subgroups, and further sequence analysis of them identified three Alternaria spp. Alternaria tenuissima, A. gaisen, and A. alternata. Representative Alternaria isolates from three species induced dark brown leaf spot lesions on detached watermelon leaves, indicating that A. tenuissima, A. gaisen, and A. alternata are all causal agents of Alternaria leaf blight. Our results indicate that the Alternaria species associated watermelon leaf blight in Korea is more complex than reported previously. This is the first report regarding the population structure of Alternaria species causing watermelon leaf blight in Korea.

국산 포도로부터 분리한 야생효모의 동정 및 특성 (Identification and Characterization of Wild Yeasts Isolated from Korean Domestic Grape Varieties)

  • 최상훈;홍영아;최윤정;박희동
    • 한국식품저장유통학회지
    • /
    • 제18권4호
    • /
    • pp.604-611
    • /
    • 2011
  • 본 연구에서는 국산 포도로부터 분리된 효모들 중 와인 발효 적성이 우수한 균주들을 선정하여 ITS-I-5.8S-ITS II DNA 염기서열 분석과 분자생물학적인 방법을 통하여 동정하였고 발효환경 내성을 알아보았다. 분리 효모들의 ITS I-5.8S-ITS II 영역을 PCR로 증폭한 결과 약 800bp의 DNA가 증폭됨을 확인하였다. 이 DNA를 제한효소 HaeIII로 처리한 경우 모두 약 400bp의 DNA band 확인되었고, Hinf I로 처리한 경우에는 약 350 bp와 300 bp의 DNA band를 나타내었다. 분리된 4 균주의 염색체 DNA를 PFGE로 확인한 결과 MM10, WW108 그리고 SS89(SS812 동일)가 서로 다른 3가지 염색체 패턴을 나타내었다. ITS I-5.8S-ITS II DNA 염기서열을 분석한 결과 모두 S. cerevisiae CBS 4054 표준균주와 97% 이상의 상동성을 나타내어 매우 가까운 근연관계에 있음을 알 수 있었다. 근린결합분석을 이용한 phylogenetic 분석을 통하여 분리 균주인 MM10, SS89, SS812 그리고 WW108 균주는 S. cerevisiae CBS 4054 표준 균주와 계통 유연관계에서 매우 가까운 위치에 있는 것을 확인할 수 있었다. 동정된 4종의 야생효모 중 200 ppm의 아황산 함유 배지에서 MM10과 WW108 균주는 24시간대에서 6% 미만의 생육 저해률을 보였다. 또한 $30^{\circ}C$ 배양온도에서 30% 포도당을 함유하는 YPD 배지에서 36시간대에서 가장 높은 성장을 나타내었으며, 특히 SS89 균주는 660 nm에서의 흡광도가 약 40에 가까운 수치를 나타내었다. 배양온도 $40^{\circ}C$에서는 모든 효모군이 10~15의 수치를 나타내어 낮은 성장을 나타내었다. 알코올(8%, v/v)을 함유하는 YPD 배지에서 배양초기에는 내성이 약하였으나 배양이 진행되면서 적응을 하기 시작하고 24시간대에서 가장 낮은 생육 저해률을 보였다.

Evaluation of Treatment Outcomes of Early-Stage Endometrial Cancer Radiotherapy: A Single Center Experience

  • Demiral, S.;Beyzadeoglu, M.;Sager, O.;Dincoglan, F.;Uysal, B.;Gamsiz, H.;Akin, M.;Turker, T.;Dirican, B.
    • Asian Pacific Journal of Cancer Prevention
    • /
    • 제15권22호
    • /
    • pp.9599-9602
    • /
    • 2014
  • Background: Postoperative adjuvant radiotherapy (RT) in the management of early stage endometrial cancer (EC) is still controversial. Here we report our institutional experience with patients who received postoperative RT for stage I-II EC over a period of 35 years and assess potential predictors of local recurrence (LR), distant metastasis (DM), and overall survival (OS). Materials and Methods: A total of 188 patients undergoing postoperative RT for stage IA-II EC between 1977 and 2012 were evaluated. Some 96 received median 46 Gy whole pelvic radiotherapy (WPRT) (range: 40-60 Gy), 37 were given WPRT with vaginal cuff therapy (VCT), and 55 received only VCT either with brachytherapy (BT) or stereotactic body radiotherapy (SBRT). Chemotherapy was given to 5 patients with uterine papillary serous carcinoma (UPSC). Logistic regression analysis was used to assess the effect of clinicopathological factors on LR, DM, and OS. Results: Median follow-up time was 11 years (range: 1-35 years). At the time of analysis, 34 patients were not alive. Of the 15 patients with LR, 7 (46.7%) recurred in the vaginal stump, 5 (33.3%) in the pelvic region, and 3 (20%) in the paraaortic nodal region, while 12 had distant metastasis. UPSC histology (p=0.027), sole VCT (p=0.041), high histologic grade (p=0.034), and age ${\geq}71$ (p=0.04) were poor prognostic factors on univariate analysis. Conclusions: In our patients receiving radiotherapy for early-stage EC, grade III disease and age ${\geq}71$ were associated with shorter OS whereas UPSC histology was an independent predictor for both LR and DM.

몽골에서 최초로 분리된 뉴캣슬병 바이러스의 분자생물학적 특성 (Molecular Biological Characterization of the First Newcastle Disease Virus Isolated in Mongolia)

  • 최강석;이은경;전우진;;;박미자;유예나;권준헌
    • 한국가금학회지
    • /
    • 제38권2호
    • /
    • pp.89-96
    • /
    • 2011
  • 몽골 산란계 농장에서 발생한 뉴캣슬병 사례로부터 뉴캣슬병 바이러스를 분리하고 그 특성을 조사하였다. 그 결과, 발생 농장 산란계 폐사계의 뇌 및 폐 조직으로부터 뉴캣슬병 바이러스 MN1/10 주가 분리되었다. 이 바이러스는 F 단백질 분절 부위가 특징적인 병원성 motif(RRQKRF)를 가지고 있었으며 종란 평균 치사 지수(MDT)가 54.7시간으로 강독형 NDV이었다. 또한 발생 농장 내 생존하고 있는 산란계에서 고역가의 NDV 특이항체가 검출되었다. 유적학적 계통 분석을 실시한 결과, 몽골 분리주는 Class II에 속하는 genotype VIId 바이러스로 확인되었다. 유전학적 계통 분석 결과, 몽골 분리주는 몽골과 인접한 중국에서 유행하는 바이러스 그룹(CN2)에 속하는 것으로 분류되었다. 우리의 연구 결과는 몽골에서의 뉴캣슬병 최초 발생은 동북아시아 지역에서 유행하는 강독형 NDV의 유입에 의해서 이루어졌음을 말해 준다.

rDNA-ITS 분석에 의한 망태버섯속균(Dictyophora spp.)의 종간 구분 가능성 (Interspecific Distinguishability of Veiled Lady Mushrooms (Dictyophora spp.) Based on rDNA-ITS Analysis)

  • 정종천;이명철;김범기;박동석;홍승범;박정식
    • 한국균학회지
    • /
    • 제32권1호
    • /
    • pp.1-7
    • /
    • 2004
  • 본 연구는 망태버섯속(Dictyophora species) 균의 종 구분을 위하여 국내수집 5균주와 국외도입 6균주에 대한 rDNA ITS 영역의 PCR-RFLP 및 염기서열을 분석하였다. 그 결과, ASI 32001, 32003, 32005, 32006, 32011이 D. indusiata, ASI 32002, 32007, 32008, 32010이 D. echinovolvata, 그리고 ASI 32004와 Phallus rugulosus ASI 25007은 같은 군으로 그룹화 되었다. 이 결과는 기존에 조사된 배양온도, 배지pH, 선택배지 등 배양적 특성과 재배적, 형태적 특성에 의한 구분과 일치하는 경향이었다. 따라서 rDNA ITS 영역의 PCR-RFLP 및 염기서열분석은 Dictyophora속 보존균주의 종 구분에 있어서 선행적, 보충적 수단으로 활용하기에 충분하다고 판단된다.

Effect of Short-term and Long-term Preservation on Motion Characteristics of Garole Ram Spermatozoa: A Prolific Microsheep Breed of India

  • Joshi, Anil;Bag, Sadhan;Naqvi, S.M.K.;Sharma, R.C.;Rawat, P.S.;Mittal, J.P.
    • Asian-Australasian Journal of Animal Sciences
    • /
    • 제14권11호
    • /
    • pp.1527-1533
    • /
    • 2001
  • Garole is a prolific, rare, less known and small size Indian sheep breed found in low and humid Sunderban region of West Bengal. Although information on stored Garole ram liquid semen upto 24 h is available, but there is a need to further investigate the short-term and long-term preservability of Garole ram semen for extensive utilization of this valuable germplasm by artificial insemination. The aim of the present study was to apply computer-assisted sperm analysis technique for assessing the motion characteristics of Garole ram semen stored (i) in liquid state at refrigeration temperature for short-term preservation upto 48 h and (ii) in frozen state at $-196^{\circ}C$ for long-term preservation after packaging in mini straws. Short-term preservation had a significant effect on motility (p<0.01) as the motility progressively decreased from 90.1% at 0 h to 85.5% and 73.2% after 24 and 48 h of storage, respectively. Although the decline in rapid moving sperms was also significant (p<0.01) on storage but the decrease was more pronounced at 48 h as compared to 24 h of storage period. Storage of chilled semen had also a significant effect on % linearity (p<0.05), % straightness (p<0.01), sperm velocities (p<0.01), amplitude of lateral head displacement (p<0.01) and beat frequency (pO.Ol) of spermatozoa. The replication had a significant effect for all the variables except average path and straight line velocity. However, the interactions of short-term storage and replication were non-significant for most of the variables except % of medium moving sperms, sperm velocities and beat frequency. On long-term preservation of Garole ram spermatozoa under controlled conditions the mean post-thaw recovery of 70.4 and 71.4% motile spermatozoa was achieved having 48.8 and 48.9% of rapidly motile spermatozoa, respectively in both the replicates. The effect of replication on cryopreservation was significant (p<0.05) on amplitude of lateral head displacement and beat frequency, but there was no significant effect on motility, rapidly motile spermatozoa, linearity, straightness and sperm velocities of frozen-thawed spermatozoa. It can be concluded from these results that an average 70% motility can be achieved on storage of Garole ram semen in chilled liquid state upto 48 h or in liquid nitrogen after freezing under controlled conditions in straws. However, further studies are required to evaluate the fertility of short-term and long-term preserved Garole ram semen for extensive use of this prolific sheep breed.

여수 연도의 식물상과 식생 (Flora and Vegetation of Yeondo Islet in Yeosu-si)

  • 박문수;조계중
    • 한국환경생태학회지
    • /
    • 제21권6호
    • /
    • pp.468-486
    • /
    • 2007
  • 연도에 분포하는 관속식물은 107과 312속 408종 2아종 51변종 5품종으로 총 466종류가 확인되었다. 이 중 소귀나무를 포함 39종류가 상록활엽수였으며, 식물구계학적 특정식물종은 I 등급에 53종류, II 등급에 1종류, III등급에 26종류, IV 등급에 3종류, V 등급에 애기등, 섬천남성 2종류가 확인되어 46과 70속 80종 5변종으로 85종류가 분포하는 것으로 조사되었다. 귀화식물은 13과 37속 40종 2변종으로 총 42분류군이 분포하였으며, 귀화율은 9.01%, 도시화지수는 14.63%로 분석되었다. 생활형조성은 H-Dl-R5-e type을 보였다. 연도의 식생은 곰솔군락(Pinus thunbergii community)과 구실잣밤나무군락(Castanopsis sieboldii community)이 분포되어 있고, 휴경지와 완경사 산지에 억새군락(Miscanthus sinesis var. purpurascens community)이 분포하였다.

LARGE-SCALE [OIII] AND [CII] DISTRIBUTIONS OF THE LARGE MAGELLANIC CLOUD WITH FIS-FTS

  • Takahashi, A.;Yasuda, A.;Kaneda, H.;Kawada, M.;Kiriyama, Y.;Mouri, A.;Mori, T.;Okada, Y.;Takahashi, H.
    • 천문학논총
    • /
    • 제27권4호
    • /
    • pp.219-220
    • /
    • 2012
  • We present the results of far-infrared spectroscopic observations of the Large Magellanic Cloud (LMC) with FIS-FTS. We covered a large area across the LMC, including 30 Doradus (30 Dor) and N44 star-forming regions, by 191 pointings in total. As a result, we detect the [OIII] and [CII] line emission as well as far-infrared dust continuum emission throughout the LMC. We find that the [OIII] emission is widely distributed around 30 Dor. The observed size of the distribution is too large to be explained by massive stars in 30 Dor, which are assumed to be enshrouded by clouds with the constant gas density estimated from the [OIII] line intensities. Therefore the surrounding structure is likely to be highly clumpy. We also find a global correlation between the [OIII] and the far-infrared continuum emission, suggesting that the gas and dust are well mixed in the highly-ionized region where the dust survives in clumpy dense clouds shielded from energetic photons. Furthermore we find that the ratios of [CII]/CO are as high as 110,000 in 30 Dor, and 45,000 even on average, while they are typically 6,000 for star-forming regions in our Galaxy. The unusually high [CII]/CO is also consistent with the picture of clumpy small dense clouds.

$SnO_{2}$ 초미세 입자의 CO 감지 특성 (CO sensing Properties of $SnO_{2}$ fine particles)

  • 박진성;박보석;노효섭
    • 한국전기전자재료학회:학술대회논문집
    • /
    • 한국전기전자재료학회 2002년도 춘계학술대회 논문집 센서 박막재료 반도체재료 기술교육
    • /
    • pp.55-61
    • /
    • 2002
  • Ultra-fine particles of $SnO_{2}$ was synthersized by the sol-gel powder processing using tin(II) chloride dihydrate$(SnCl_{2}{\cdot}2H_{2}O)$ and ethanol$(C_{2}H_{5}OH)$ as raw materials. Gel powders can be obtained by drying of sol at $120^{\circ}C$ after aging 72hrs and 168hrs. The amount of $SnO_{2}$ phase was increased with temperature because of the evaporation of volatile components, and the creation of $SnO_{2}$ phase was almost done by the heat treatment at $700^{\circ}C/30min$ The grain sizes after firing are about 20-30nm, and it showed the narrow distribution of grain size. The specimens to measure electrical properties were fabricated by the thick film screen printing technique on the alumina substrates. The conductance of $SnO_{2}$ was increased with temperature up to $380^{\circ}C$ by the typical conduction mechanism of semiconducting ceramics. There was a region of constant conductance between about $200^{\circ}C$ and $380^{\circ}C$ due to the increment of electron concentration with temperature and the annihilation of conduction carriers by the absorption and electron trapped-ionization of oxygen on the surface of $SnO_{2}$, It was finally showed the intrinsic behaviors above $450^{\circ}C$. The sensing properties of response time, recovery, and sensitivity of CO were improved with aging time.

  • PDF