• Title/Summary/Keyword: Genetic correlation

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Estimation of Genetic Parameter for Linear Type Traits in Holstein Dairy Cattle in Korea (Holstein종 젖소의 선형심사형질에 대한 유전모수추정)

  • Lee, Ki-Hwan;Sang, Byung-Chan;Nam, Myoung-Soo;Do, Chang-Hee;Choi, Jae-Gwan;Cho, Kawng-Hyun
    • Journal of Animal Science and Technology
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    • v.51 no.5
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    • pp.345-352
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    • 2009
  • This study utilized 332,625 records of linear type scores consisting for 15 primary traits, 22,175 final score and 84,612 pedigree information of 22,175 Holstein cows from 1993 to 2007 in Korea to estimate genetic parameters for 16 type traits. Genetic and error (co)variances between two traits selected from 16 traits were estimated using bi-trait pairwise analyses with DFREML package. The estimated heritabilities for stature (ST), strength (STR), body depth (BD), dairy form (DF), rump angle (RA), thurl width (TW), rear legs side view (RLSV), foot angle (FA), fore udder attachment (FUA), rear udder height (RUH), rear udder width (RUW), udder cleft (UC), udder depth (UD), front teat placement (FTP), front teat length (FTL) and final score (FS) were 0.31, 0.21, 0.25, 0.10, 0.29, 0.19, 0.09, 0.06, 0.12, 0.13, 0.12, 0.08, 0.26, 0.20, 0.28 and 0.15, respectively. ST had the highest positive genetic correlation with BD (0.90), while RLSV had the highest negative genetic correlation with FA (-0.56). RA had negative genetic correlation with most udder traits (-0.17~-0.02). Especially, RUW had the higher positive genetic correlation with STR (0.60), BD (0.62), and TW (0.49), however, UD had the higher negative genetic correlation with STR (-0.40) and BD (-0.40). FTL had negative genetic correlation with FUA, RUH, RUW, UC and UD. FS had positive genetic correlation with UC, UD and FTP (0.12, 0.18 and 0.20). However, additional research is needed on the use of these parameters in the genetic evaluation because estimated genetic and error variance-covariance matrices were not positive definite.

The Nurses′ Knowledge and Perception of Their Role in Genetics

  • Kim, Mi-Young
    • Journal of Korean Academy of Nursing
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    • v.33 no.8
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    • pp.1083-1092
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    • 2003
  • Purpose. The purpose of the study was to assess the level of nurses' genetic knowledge and the perception of nurses' role in genetics. The ultimate goal of this paper is to educate practicing nurses so that they can counsel individuals and families with genetic problems, on the basis of better understanding of genetic diseases. Methods. A total of 969 clinical nurses in 11 general hospitals completed a self-administered questionnaire including basic genetic knowledge and perception of their role. The instruments were made by the author with the help of some experts on genetics. T-test, ANOVA, and Pearson Correlation were used to analyze the data. Results. The results of this study indicated that nurses revealed a vast knowledge deficit in genetics and the need for genetic content in nursing curriculum. The results also showed that nurses' sources of information about genetics largely came from the mass media. The nurses also expressed great interest in educating and counseling patients. Overall, the survey found a positive correlation between the nurses' level of knowledge and their degree of interest in genetics. Conclusion. In conclusion, education and training of clinical nurses in genetics is critical in integrating genetics with nursing science. Therefore, the development of educational programs for nursing knowledge and counseling as well as basic curriculums in genetic nursing at universities are essential in the near future.

Genetic and Phenotypic Evaluation of Milk and Fat Production Traits and Their Interrelationship in (Zebu×European) Crossbred Cattle Using Parent Group Mixed Model

  • Singh, D.;Yadav, A.S.;Dhaka, S.S.
    • Asian-Australasian Journal of Animal Sciences
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    • v.16 no.9
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    • pp.1242-1246
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    • 2003
  • Data pertained to 335 crossbred cows comprising of 1/2 Friesian (F) + 1/2 Hariana (H), 1/2 F + 1/4 Jersey (J) + 1/4 H, 1/2 F + 1/4 Brown Swiss (BS) + 1/4 H, 1/2 F + 1/4 Red Dane (R) + 1/4 H, FR (I) and FRH (I) genetic groups extending over a period of 21 years (1970-1990) maintained at Animal Farm of CCS HAU, Hisar. The averages for first lactation milk yield was $2,486.24{\pm}80.26kg$ and peak yield of first three lactation were $11.35{\pm}0.72kg$, $13.97{\pm}0.60kg$ and $16.02{\pm}0.42kg$, respectively. The lifetime milk production was observed as $11,305.16{\pm}1,004.52kg$ in crossbred cattle. The average first lactation fat yield was observed as $102.06{\pm}0.01kg$ and peak fat yield of first three lactation were $0.458{\pm}0.01$, $0.490{\pm}0.01$ and $0.500{\pm}0.02kg$, respectively. The lifetime fat production was estimated as $502.31{\pm}45.90kg$. LTMP and LTFP had reasonably good additive genetic variance which could be exploited either through mass selection/combined with family or pedigree selection. FLMY, peak yields and LTMP had significant positive phenotypic correlation with FLFY and LTFP and the correlation at the genetic level were also higher and positive for these traits. Finally, peak week milk yield of first lactation (PMY1) was the earliest available trait having desirable and significant correlation at phenotypic and positive at genetic level with FLFY, PFY1 and PFY2, PFY3 and LTFP and selection for this trait will help in early evaluation of sires and dams and will increase genetic advancement per unit of time.

Analysis of the hereditary factor in craniofacial morphology and fingerprints in Class III malocclusion (III급 부정교합에서 두개안면 형태와 지문의 유전성향 분석)

  • Oh, Tae-Kyung;Baik, Hyoung-Seon
    • The korean journal of orthodontics
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    • v.34 no.4 s.105
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    • pp.279-287
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    • 2004
  • In growing patients with Class III malocclusion, the various patterns of maxillofacial growth are a key element that affects the success or failure of treatment. Therefore it is important to correctly predict maxillofacial growth before initiating treatment. The purpose of this study was to find out the correlation between the maxillofacial morphology of parents and their Class III children by analyzing lateral cephalograms and hereditary factors. Among Class III preadolescent children, 50 families were obtained. To find out the specific hereditary factors involved, fingerprints were obtained and genetic correlation with the maxillofacial morphology was analyzed. The following conclusions were made. 1. A significant correlation (P<0.05-0.00l) was found in many of the cephalometric measurements between the offspring and their parents. The correlation in the skeleton measurements was higher than in the denture measurements. The father-offspring correlation was higher than the mother-offspring correlation 2. A significant correlation (P<0.05-0.00l) was found in fingerprint units between the offspring and their parents. The mother-offspring correlation was higher than the father-offspring correlation. 3. Between the maxillofacial morphology and fingerprint units, there was significant genetic correlation (P<0.05-0.01). Based on the analysis of genetic correlation, higher correlation was found in the parent-son pairing than the parent-daughter pairing.

Effect of Family Size and Genetic Correlation between Purebred and Crossbred Halfsisters on Response in Crossbred and Purebred Chickens under Modified Reciprocal Recurrent Selection

  • Singh, Neelam;Singh, Raj Pal;Sangwan, Sandeep;Malik, Baljeet Singh
    • Asian-Australasian Journal of Animal Sciences
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    • v.18 no.1
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    • pp.8-12
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    • 2005
  • Response in a modified reciprocal recurrent selection scheme for egg production was evaluated considering variable family sizes and genetic correlation between purebred and crossbred half sisters. The criteria of selection of purebred breeders included pullet's own performance, purebred full and half sisters and crossbred half sister's performance. Heritability of egg production of crossbreds (aggregate genotype) and purebred's was assumed to be 0.2 and genetic correlation between purebred and crossbred half sisters ($r_{pc}$) as 0.1, 0.2, 0.3, 0.4, 0.5, 1.0, -0.1, -0.2, -0.3, -0.4, -0.5 and -1.0. Number of dams per sire to produce purebred and crossbred progenies assumed to be 5, 6, 7, 8, while number of purebred female progeny ($N_p$) and crossbred progeny ($N_c$) per dam were considered to be 3, 4, 5 and 6 in each case. Considering phenotypic variance as unity, selection indices were constructed for different combinations of dams and progeny for each value of $r_{pc}$. Following selection index theory, response in crossbred and purebred for egg production was computed. Results indicated that response in crossbreds depended mainly on crossbred family size and also on magnitude of$r_{pc}$ irrespective of its direction, and response was greater with large crossbred family size than the purebred families. Correlated response in purebreds depends both on magnitude and direction of $r_{pc}$ and was expected to be greater with large purebred family size only. Inclusion of purebred information increased the accuracy of selection for crossbred response for higher magnitude of$r_{pc}$ irrespective of its direction. Present results indicate that desirable response in both crossbred and purebred performance is a function of $r_{pc}$ and family sizes. The ratio of crossbred and purebred family sizes can be optimized depending on the objective of improving the performance of crossbreds and/or of purebreds.

Investigation of Defense and Vegetative Growth Related Traits of Recombinant Inbred Lines of Brassica rapa

  • Kwon, Soon-Tae;Yeam, Inhwa;Shin, Jong Hwa
    • Korean Journal of Plant Resources
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    • v.33 no.6
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    • pp.615-623
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    • 2020
  • Brassica rapa is one of the most valuable vegetable crops worldwide. Cultivated varieties of B. rapa exhibit diverse developmental and morphological appearances, which includes important vegetables, oilseeds, and fodder crops. In this study, various phenotypes of recombinant inbred lines (RILs) of B. rapa were investigated, including their responses to five different pathogenic Botrytis cinerea isolates, responses to aphid and thrips during flowering stages, days to flowering, and plant heights. Responses of 113 RILs to five different B. cinerea isolates showed variations, suggesting that genetic factors controlling resistance or tolerance against each isolate were dependent on isolate/genotype pairs. Correlation analysis was performed to understand the nature of genetic factors and the relationship among these phenotypes. Although high levels of correlation were not detected between phenotypes assessed in this study, statistically significant correlation was detected for several combinations. Significant positive correlations were found for different B. cinerea isolates, supporting that certain levels of commonality could exist in genetic components controlling resistance against different B. cinerea isolates. Based on correlation analysis using numbers of insects counted on plants, it was speculated that genetic factors responsible for aphid tolerance or repellence might be also involved in the response against thrips. Relationship between vegetative growth and tolerance against B. cinereal or insects is rather more complicated. However, it was observed that shorter plants appeared to have a certain level of tolerance or repellence against both aphids and thrips. Data presented in this study could be used to assist further genetic studies and breeding efforts to obtain Botritis and insect resistance for B. rapa.

A Decision Tree Induction using Genetic Programming with Sequentially Selected Features (순차적으로 선택된 특성과 유전 프로그래밍을 이용한 결정나무)

  • Kim Hyo-Jung;Park Chong-Sun
    • Korean Management Science Review
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    • v.23 no.1
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    • pp.63-74
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    • 2006
  • Decision tree induction algorithm is one of the most widely used methods in classification problems. However, they could be trapped into a local minimum and have no reasonable means to escape from it if tree algorithm uses top-down search algorithm. Further, if irrelevant or redundant features are included in the data set, tree algorithms produces trees that are less accurate than those from the data set with only relevant features. We propose a hybrid algorithm to generate decision tree that uses genetic programming with sequentially selected features. Correlation-based Feature Selection (CFS) method is adopted to find relevant features which are fed to genetic programming sequentially to find optimal trees at each iteration. The new proposed algorithm produce simpler and more understandable decision trees as compared with other decision trees and it is also effective in producing similar or better trees with relatively smaller set of features in the view of cross-validation accuracy.

Studies on Intramuscular Fat Percentage in Live Swine Using Real-time Ultrasound to Determine Pork Quality

  • Jung, Jong-Hyun;Shim, Kwan-Seob;Na, Chong-Sam;Choe, Ho-Sung
    • Asian-Australasian Journal of Animal Sciences
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    • v.28 no.3
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    • pp.318-322
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    • 2015
  • In the modern pork industry, selection of high intramuscular fat (IMF) in pigs is necessary to improve pork quality. Ultrasound has been used previously to predict subcutaneous fat thickness and IMF in the longissimus muscles of line pigs and Real-time ultrasound has also been reported as a reliable method for estimating IMF in live pigs. So we estimate the correlation between meat quality traits and IMF percentage to investigate the possibility of utilizing real-time ultrasound technology for predicting IMF percentage in line pigs to improve pork quality. The genetic and phenotypic correlations for chemical intramuscular fat (CIMF) and ultrasound intramuscular fat (UIMF) were estimated to be 0.75 and 0.76, respectively. These results suggest that genetic factors strongly influence meat quality. The genetic and phenotypic correlation between UIMF and CIMF were 0.75, 0.76, respectively. The heritability of UIMF and CIMF were 0.48 and 0.50, respectively. So we concluded that CIMF can be replaced with UIMF and Ultrasound machines can be used to test IMF in live swine. In future, UIMF can be utilized to improve pork quality as an alternative to CIMF.

Genetic Parameter Estimation on the Growth and Carcass Traits in Hanwoo(Korean Cattle) (한우의 성장 및 도체형질에 대한 유전모수 추정)

  • ;;Salces, Agapita J
    • Journal of Animal Science and Technology
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    • v.48 no.6
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    • pp.759-766
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    • 2006
  • This study was conducted to investigate the genetic correlations among the traits used to select young bulls and proven bulls in Hanwoo Performance and Progeny Test Program in Korea. For the estimation of heritabilities and correlations among the growth traits of bulls and carcass traits of progeny steers, 2,532 records of performance tested bull calves and 1,819 records of progeny tested steers were collected from Livestock Improvement Main Center (LIMC), National Agricultural Cooperative Federation (NACF). Fixed effects of mixed model for each traits were selected by using stepwise regression analysis and prior values of variance components were estimated by MTDFREML. The prior values of variance components were estimated with pairwise 2 traits model followed by single trait analysis. The estimated heritability of backfat thickness(BF), dressing percentage(DP), loin-eye muscle area(LMA), marbling score(MS) and weight at 12 months(WT12) was 0.51, 0.32, 0.27, 0.33, 0.50 and 0.26, respectively. Genetic correlation of WT12 of bull calves with backfat thickness, carcass weight and loin-eye muscle area of steers was positive correlation as 0.05, 0.35 and 0.21, respectively. However genetic correlation of WT12 with DP and MS showed negative correlation as 󰠏0.09 and 󰠏0.27, respectively and these negative genetic correlations implies that bulls that may be superior in carcass traits can be lost at the first step of selection and current selection method should be modified to solve this problem.

Estimation of Genetic Correlations for the Growth and Carcass Traits in Hanwoo (한우의 성장형질과 도체형질에 대한 유전상관 추정)

  • Park, C.J.;Park, Y.I.
    • Journal of Animal Science and Technology
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    • v.44 no.6
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    • pp.685-692
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    • 2002
  • This study was carried out to estimate the genetic correlations for the carcass and growth traits of Hanwoo bulls measured at 12 and 18 months of age on the basis of the data form 1,823 heads of Hanwoo bulls raised at the Livestock Improvement Main Center from 1991 to 1998. Genetic correlations were estimated with multiple trait animal model using MTDFREML. The genetic correlations of the body weight at 12 months with average daily gain during 6${\sim}$12 months and with the body length were 0.76 and 0.79, respectively. The genetic correlations of the body weight at 18 months with average daily gain during 6${\sim}$18 months and with the body length were 0.86 and 0.82, respectively. The genetic correlations of the carcass weight with dressing percent, eye muscle area, backfat thickness and carcass length were 0.39, 0.37, 0.44 and 0.63, respectively. And estimate of 0.36 was obtained for the genetic correlation between backfat thickness and marbling score. The high and positive genetic correlations of 0.71 and 0.96 were estimated for the carcass weight with the body weights at 12 and 18 months. The genetic correlations of the carcass weight with body lengths at 12 and 18 months were 0.63 and 0.75, respectively. Positive genetic correlations were estimated for the dressing percentage with the body weight, average daily gain, body length, thurls width and chest girth. Low genetic correlations were estimated between eye muscle area and the growth traits ranging from -0.07 to 0.32. Dressing percentage was low correlated genetically with the growth traits except for the chest girth at 18 months. The genetic correlation between marbling score and chest girth at 18 months estimated was 0.25.