• 제목/요약/키워드: Fish Assembly

검색결과 14건 처리시간 0.027초

어류군집의 종분포모형을 이용한 수변지역 연결성 평가 (Riparian Connectivity Assessment Using Species Distribution Model of Fish Assembly)

  • 정승규;이동근;류지은
    • 대한공간정보학회지
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    • 제23권2호
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    • pp.17-26
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    • 2015
  • 하천 코리더는 종의 국소적 소멸을 예방하도록 분산과 이동을 원활하게 한다. 그러나 우리나라는 수변의 치수, 친수, 이수와 같은 기능을 중시한 결과 수중보, 댐과 같은 인공구조물 설치로 하천 코리더의 연결성을 약화시켜왔다. 본 연구는 강원도 횡성의 섬강을 대상으로 어류의 군집에 영향을 미치는 변수를 종분포모형을 이용하여 추출하고 수변지역의 연결성을 종풍부도와 희귀도로 평가하는 것이다. 현장조사 결과 출현종수는 38종 7,061개체로 나타났으며, 연구결과는 다음과 같다. 첫째, 종분포모형 결과 어류의 종풍부도에 영향을 주는 변수는 유속과 급여울, 하천의 폭과 수변의 면적으로 선택되었으며, 모형의 정확도 검증 결과 상관계수는 0.83, 절대평균오차는(MAPE)는 19.2%로 적합한 것으로 나타났다. 둘째, 희귀도가 낮은 지점은 수로가 직강화된 전천과 횡성군 시가화지역 인근으로 나타났으며, 높은 지점은 하천 폭이 넓고 섬강과 전천이 합류하는 지점과 하도습지가 있는 하류지점으로 분석되었다. 연결성이 낮은 지점은 수변의 완충림이 거의 없고 보(洑)가 설치되어 있는 지점으로 나타났으며, 높은 지점은 하천 주변에 농경지 및 산림과 같은 자연토지피복이 우점하고 수변의 모래/자갈의 비율이 높은 곳이 연결성이 높게 평가되었다. 본 연구에서 제시한 결과는 복원을 위한 가이드로 기존 수변 시설물을 개선하고 추가하여 연결성을 강화시키는데 좋은 기준이 될 것으로 판단한다.

어교(魚膠)의 접착특성 (The Adhesion Property of Fish Glue)

  • 이영규;황현득;김현중
    • Journal of the Korean Wood Science and Technology
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    • 제32권5호
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    • pp.59-65
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    • 2004
  • 물고기의 공기 주머니인 부레를 말려 두었다가 물에 넣어 끓여서 만든 어교는 전통적인 방법으로 사용되고 있다. 어교의 경화시간에 따른 접착력과 접착력을 향상시키기 위한 방법으로 최적의 개방퇴적시간을 조사하여 어교의 접착특성을 연구하였다. TGA, DSC, FT-IR을 이용하여 경화 전과 후의 휘발성 물질(수분)의 변화량에 따른 어교의 경화특성과 어교의 반응성을 측정하였으며 자작나무 시편을 이용한 lap shear strength를 측정하여 경화시간과 개방퇴적시간에 따른 접착특성을 평가 하였다. 본 실험 결과 어교는 경화온도 22±1℃, 상대습도 43±2%에서 경화시간에 따른 접착력은 48시간에서 최대 강도를 나타냈으며 개방퇴적시간과 경화시간에 따른 접착력은 개방퇴적시간을 15분을 유지하고 6시간의 경화시간을 유지할 때 가장 높은 접착력을 나타냈다.

HPLC를 이용한 어류 중의 Spiramycin 분석 (Analysis of Spiramycin in Fish Using High Performance Liquid Chromatography)

  • 이태식;이희정;조미라;변한석;손광태;박미정;이영호
    • 한국수산과학회지
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    • 제39권2호
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    • pp.78-84
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    • 2006
  • A high performance liquid chromatography assay method for spiramycin in fish muscle was developed. The developed method was evaluated and validated by monitoring spiramycin in olive flounder (Paralichthys olivaceus), black rock fish (Sebastes schlegeli) and in live conger eel (Anguilla japonica) in fish farms and distribution centers. Using the developed method, the recovery rate was up to 82.4-88.8%, which was higher than that of conventional methods (77.6-87.1%). In particular, the proposed sample treatment protocol was suitable for use with fish samples to remove low molecular weight materials and pigments that could interfere an accurate analysis. The prepared stock solution was very stable, and it remained chemically stable for 5 weeks at $4^{\circ}C$. The performance limit of the developed method for spiramycin acid in fish muscle was 0.05 ppm. One hundred thirty-four fish samples including olive flounder, black rock fish and live conger eel were analyzed to evaluate the overall efficiency of the modified method and to monitor the actual condition of spiramycin usage in fish farms. Olive flounder and black rock fish were collected from fish farms in coastal areas of Korea, and live conger eels were purchased from a fish market in the Busan area from September 2001 to March 2002. According to the overall performance of the developed method, it was considered suitable for the monitoring of spiramycin in fish muscle. The suggested method of analysis for spiramycin in fish muscle is registered in the Korean Official Methods of Food Analysis and is currently tieing utilized for fishery products inspection by the Korea Food and Drug Administration and the National Fisheries Products Quality Inspection Service.

HPLC를 이용한 어류 중의 Oxolinic Acid 분석 (Analysis of Oxolinic Acid in Fish Products Using HPLC)

  • 이희정;이태식;손광태;김풍호;조미라;박미정;이영호
    • 한국수산과학회지
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    • 제38권6호
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    • pp.379-384
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    • 2005
  • A high-performance liquid chromatography assay method for oxolinic acid in fish products was developed, evaluated and validated through the monitoring of oxolinic acid based on farming and distribution. The recovery rate of the developed method was $102.3-106.7\%$ as compared to conventional methods. The stock solution was stable for 3 weeks under refrigerated condition at $4^{\circ}C$ The performance limit was evaluated as 0.01ppm of oxolinic acid in fish muscle. 478 fish samples such as olive flounder, genuine porgy, common sea bass and black rock fish collected from fish farms in the coastal area from September 2001 to October 2004 were analyzed to evaluate overall efficiency of the modified method and to monitor the actual condition of oxolinic acid usage in fish farm. According to the monitoring results, the modified method was suitable for analysis of oxolinic acid in fish muscle and oxolinic acid might be used in a small portion of fish farms. The suggested analysis method of oxolinic acid was registered in the Korean Official Methods of Food Analysis and is being utilized for fishery products by the Korea Food and Drug Adminstration and the National Fisheries Products Quality Inspection Service.

State of the art on the physical mapping of the Y-chromosome in the Bovidae and comparison with other species - A review

  • Rossetti, Cristina;Genualdo, Viviana;Incarnato, Domenico;Mottola, Filomena;Perucatti, Angela;Pauciullo, Alfredo
    • Animal Bioscience
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    • 제35권9호
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    • pp.1289-1302
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    • 2022
  • The next generation sequencing has significantly contributed to clarify the genome structure of many species of zootechnical interest. However, to date, some portions of the genome, especially those linked to a heterogametic nature such as the Y chromosome, are difficult to assemble and many gaps are still present. It is well known that the fluorescence in situ hybridization (FISH) is an excellent tool for identifying genes unequivocably mapped on chromosomes. Therefore, FISH can contribute to the localization of unplaced genome sequences, as well as to correct assembly errors generated by comparative bioinformatics. To this end, it is necessary to have starting points; therefore, in this study, we reviewed the physically mapped genes on the Y chromosome of cattle, buffalo, sheep, goats, pigs, horses and alpacas. A total of 208 loci were currently mapped by FISH. 89 were located in the male-specific region of the Y chromosome (MSY) and 119 were identified in the pseudoautosomal region (PAR). The loci reported in MSY and PAR were respectively: 18 and 25 in Bos taurus, 5 and 7 in Bubalus bubalis, 5 and 24 in Ovis aries, 5 and 19 in Capra hircus, 10 and 16 in Sus scrofa, 46 and 18 in Equus caballus. While in Vicugna pacos only 10 loci are reported in the PAR region. The correct knowledge and assembly of all genome sequences, including those of genes mapped on the Y chromosome, will help to elucidate their biological processes, as well as to discover and exploit potentially epistasis effects useful for selection breeding programs.

잠복감염시의 해양버나바이러스의 세포내에서의 동태 (Persistent Infection of Marine Birnavirus and its Status of Infection in Cells)

  • 정성주;오명주
    • 한국어병학회지
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    • 제15권1호
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    • pp.9-16
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    • 2002
  • The objective of the study was to clarify the mechanism of persistent infection of marine birnavirus (MABV) in various nonpermissive cell lines. It was observed in CHSE-214, RTG-2 and RSBK-2 that the virus produced at high yield with typical cytopathic effect (CPE). On the contrary, the CPE was not produced in EPC, FHM and BF-2 cells. However amount of virus protein in both permissive and nonpermissive cell lines detected by ELISA was almost the same. Electron microscopy showed virions in permissive cells but not in nonpermissive cells. From the results, it is clear that virus protein and RNA were produced in nonpermissive cells as observed in permissive cells; however, assembly of the virus particles did not occur in nonpermissive cells.

HPLC를 이용한 어패류 중의 테트라사이클린계 항생제 분석방법 개발 (Analysis of Tetracyclines Using Righ-Perforklance Liquid Chromatography for Fishery Products)

  • 이희정;이태식;손광태;김풍호;조미라;박미정;이영호
    • 한국수산과학회지
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    • 제38권6호
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    • pp.372-378
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    • 2005
  • An analysis method of tetracyclines far fish and shellfish products containing large amount of low molecular materials and pigments was established. The recovery of the established analysis method for four tetracycline samples was $72-100\%$ and higher than other methods reported. Especially, proposed sample treatment protocol was shown to be effective for the removal of low molecular materials and pigments that tend to interfere with accurate analysis. The detection limit of oxytetracycline (OTC) and tetracycline (TC) from the sample was 0.02 ppm, and the detection limit of chlortetracycline (CTC) and doxycycline (DC) from the sample was 0.1ppm, To examine the efficiency of the established method and identify tetracycline usage in fish farms, tetracycline group antibiotics in the flounder being cultured was monitored. The improved method can be used for fish and shellfish products effectively and all surveyed fish farms have used tetracycline all the year round. The proposed method was adopted as official method for fishery products by Korean Food and Drug Administration in 2003 and it is being used by regulatory authority as National Fishery Products Quality Inspection Service.

De novo Assembly and Analysis of Amur Sturgeon (Acipenser schrenckii) Transcriptome in Response to Mycobacterium Marinum Infection to Identify Putative Genes Involved in Immunity

  • Zhang, Qianqian;Wang, Xiehao;Zhang, Defeng;Long, Meng;Wu, Zhenbing;Feng, Yuqing;Hao, Jingwen;Wang, Shuyi;Liao, Qian;Li, Aihua
    • Journal of Microbiology and Biotechnology
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    • 제29권8호
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    • pp.1324-1334
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    • 2019
  • Fish mycobacteriosis is a common bacterial disease in many species of freshwater and marine fish and has caused severe loss of fish production. Mycobacterium marinum has been the most prevalent pathogen observed in several outbreaks of mycobacteriosis of farmed sturgeons in China. However, the immune responses and pathology of sturgeons in mycobacterial infection are rarely studied. Therefore, we used the Illumina RNA-seq method to analyze the transcriptome profile of Acipenser schrenckii challenged with Mycobacterium marinum. To begin, 168,220 non-redundant contigs were acquired from the infection and control groups, and among these, 33,225 contigs have acquired annotations. A total of 4,043 differently expressed (DE) contigs between the two groups were identified, and among these, 2479 were up-regulated and 1564 were down-regulated in the infected fish. A total of 1,340 DE contigs with acquired annotations in KEGG were enriched for 124 pathways including the TNF signaling pathway, and the Toll-like receptor signaling pathway. The roles of DE genes involved in significant pathways and other processes were discussed. The 2,209 DE contigs that have yet to acquire proper annotation may represent candidate genes associated with infection in sturgeons and are expected to serve as immunogenetic resources for further study. To our best knowledge, this is the first transcriptome study on sturgeons under bacterial infection.

Production of virus-like particles of nervous necrosis virus displaying partial VHSV's glycoprotein at surface and encapsulating DNA vaccine plasmids

  • Yang, Jeong In;Bessaid, Mariem;Kim, Ki Hong
    • 한국어병학회지
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    • 제33권2호
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    • pp.103-109
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    • 2020
  • In order to use nervous necrosis virus (NNV) virus-like particles (VLPs) as a delivery tool for heterologous antigens or plasmids, we attempted to produce red-spotted grouper nervous necrosis virus (RGNNV) VLPs displaying a partial region of viral hemorrhagic septicemia virus (VHSV) glycoprotein at the surface and VLPs that are harboring DNA vaccine plasmids within the VLP. A peptide encoding 105 amino acids of VHSV glycoprotein was genetically inserted in the loop region of NNV capsid gene, and VLPs expressing the partial part of VHSV glycoprotein were successfully produced. However, in the transmission electron microscope analysis, the shape and size of the partial VHSV glycoprotein-expressing NNV VLPs were irregular and variable, respectively, indicating that the normal assembly of capsid proteins was inhibited by the relatively long foreign peptide (105 aa) on the loop region. To encapsulate by simultaneous transformation with both NNV capsid gene expressing plasmids and DNA vaccine plasmids (having an eGFP expressing cassette under the CMV promoter), NNV VLPs containing plasmids were produced. The encapsulation of plasmids in the NNV VLPs was demonstrated by PCR and cells exposed to the VLPs encapsulating DNA vaccine plasmids showed fluorescence. These results suggest that the encapsulation of plasmids in NNV VLPs can be done with a simple one-step process, excluding the process of disassembly-reassembly of VLPs, and NNV VLPs can be used as a delivery tool for DNA vaccine vectors.

원구멍이 있는 십자형 탄성체를 가진 6축 힘, 토크 센서의 변형률 해석 (Strain Analysis of a Six Axis Force-Torque Sensor Using Cross-Shaped Elastic Structure with Circular Holes)

  • 김주용;강철구
    • 한국정밀공학회지
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    • 제16권2호통권95호
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    • pp.5-14
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    • 1999
  • The necessity of six axis force-torque sensors is well recognized in the fields of automatic fine assembly, deburring polishing, and automatic fish processing using robotic manipulators. The paper proposes a simple and compact elastic structure of the force-torque sensor which senses externally applied three force and three torque components. Rough surface strain distribution of the elastic structure is examined analytically, and then more accurate surface strain are obtained from finite element analysis. The compliance matrix which is a linear relationship between force components and strain measurements is obtained for the proposed sensor. Some basic principles of measuring 3 force and torque components are also presented.

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