• Title/Summary/Keyword: Fine lines

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Machine learning based anti-cancer drug response prediction and search for predictor genes using cancer cell line gene expression

  • Qiu, Kexin;Lee, JoongHo;Kim, HanByeol;Yoon, Seokhyun;Kang, Keunsoo
    • Genomics & Informatics
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    • v.19 no.1
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    • pp.10.1-10.7
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    • 2021
  • Although many models have been proposed to accurately predict the response of drugs in cell lines recent years, understanding the genome related to drug response is also the key for completing oncology precision medicine. In this paper, based on the cancer cell line gene expression and the drug response data, we established a reliable and accurate drug response prediction model and found predictor genes for some drugs of interest. To this end, we first performed pre-selection of genes based on the Pearson correlation coefficient and then used ElasticNet regression model for drug response prediction and fine gene selection. To find more reliable set of predictor genes, we performed regression twice for each drug, one with IC50 and the other with area under the curve (AUC) (or activity area). For the 12 drugs we tested, the predictive performance in terms of Pearson correlation coefficient exceeded 0.6 and the highest one was 17-AAG for which Pearson correlation coefficient was 0.811 for IC50 and 0.81 for AUC. We identify common predictor genes for IC50 and AUC, with which the performance was similar to those with genes separately found for IC50 and AUC, but with much smaller number of predictor genes. By using only common predictor genes, the highest performance was AZD6244 (0.8016 for IC50, 0.7945 for AUC) with 321 predictor genes.

Seasonal Variation of Surface Sediments in 2014 on the Gochang Open-Coast Intertidal Flat, Southwestern Korea (고창 개방형 조간대 표층 퇴적물의 2014년 계절 변화)

  • Kang, Sol-Ip;Ryang, Woo-Hun;Jin, Jae-Hwa;Chun, Seung-Soo
    • Journal of the Korean earth science society
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    • v.37 no.2
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    • pp.89-106
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    • 2016
  • The Gochang open-coast intertidal flat is located in the southwestern coast of Korea (the eastern part of the Yellow Sea), characterized by macro-tidal range, an open-coast type, and sand substrates. This study has investigated seasonal variation in sedimentary facies of surface sediments in the Gochang intertidal flat. In the four seasons of February, May, August, and November, 2014, surface sediments of 252 sites in total were sampled and analyzed along three survey lines. The surface sediments of the Gochang intertidal flat in 2014 consisted mainly of fine-grained sand sediments showing a trend in grain size to be coarser in winter and finer in summer. Based on seasonal wave and tidal level data recorded near the study area, it was interpreted that the seasonal effects of wave were stronger than those of tide as a factor controlling surface sedimentation. High waves in winter resulted in the coarsening trend of grain size in surface sediments, whereas, during summer time, the sediments became finer by relatively low waves. Spatial sedimentary facies of the Gochang intertidal flat in 2014 represented that seasonal deviation of the upper tidal zone was larger than that of the lower tidal zone, hence sediments getting coarser in grain size and poorly sorted in the upper tidal zone. From upper to lower tidal zone, the grain size became finer and sediments were better-sorted, showing smaller seasonal deviations.

An Electrical Resistivity Survey for the Characterization of Alluvial Layers at Groundwater Artificial Recharge Sites (지하수 인공함양 지역 충적층 특성 평가를 위한 전기비저항탐사)

  • Won, Byeongho;Shin, Jehyun;Hwang, Seho;Hamm, Se-Yeong
    • Geophysics and Geophysical Exploration
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    • v.16 no.3
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    • pp.154-162
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    • 2013
  • Vertical electrical sounding and 2D electrical resistivity survey were applied for evaluating the characteristics of alluvial layers at a groundwater artificial recharge site. The fine particles in alluvial layer, main target layer of groundwater artificial recharge, may cause clogging phenomena. In this case, electrical resistivity method is an effective technique to verify the spatial distribution of low-resistivity layers, such as saturated silts and clays. On the other hand, much attention should be paid to interpret the resistivity data in unconsolidated layers, because thick clayey overburden sometimes produces a masking effect on underlying interbedded resistive sands and gravels. Considering these points, we designed 35 points arranged in a grid form for vertical electrical sounding and 10 lines for 2D electrical resistivity survey, and concentrated our effort on enhancing the vertical and horizontal resolution of resistivity images. According to the results, 15 meters thick layers consisting of sands and gravels are located in 30 meters below ground. And the spatial distribution of silts and clays are mapped, which may cause clogging. Consequently, this approach can contribute to design and determine the location and depth of injection and observation wells for groundwater artificial recharge.

A Study on the Construction and Deconstruction of the 'Grid' : The Historical Context and Interpretation ('그리드'(Grid)의 형성과 해체 -서양회화의 사적맥락과 그 해석을 중심으로 -)

  • Kim Jai-Kwan
    • Journal of Science of Art and Design
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    • v.1
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    • pp.125-164
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    • 1999
  • The Grid, a lattice structure adapted in paintings, is one of thesimplest plastic structures based on the intersection of horizontal and perpendicular lines. Though mankind has, from the pre-history to the present day, put it to good use in everyday life as a traditional practice or a magical, esoteric, religious emblem in the case of the teciform of primitve art, it was in the paintings of Piet Mondrian that the Grid showed its modern, artistic transformation. As we suggest in the title, before I state the Grid as a plastic construction of modern painting, this dissertation inquires the Grid structure that extends over paintings through the ages as a painterly conept, especially focused on their formation and deconstruction. To begin with, my dissertation investigates, as a historical background, a general idea of the geometrical structure and phases of its transition in art, prior to dealing with the Grids as plastic strures in modern painting. the core of my study on formal Grids is permeated through the third chapter. The first chapter concentrates on, firstly, difining the notion of the Grid and geometrical structure, secondly, searching for a historical backgrounb with whict the so- called modern Grid-paintings come in, inquiring into the formation of the illusion-Grid as aresult of discovering the linear perpective and the situation of the conflict and reconciliaton between reality and illusion. Based on these considerations, the second cecond chapter will examine the various sitations of formation and adaptation of the paintery Grids in the Literalism-Grid, as we have already seen in the chapter one. And the cardinal third chapter devotes itself to the process of the formation of the so-called Object-Grid and Literal-Grid in the Literalism or Minimalism as its logical extension of the Painterly Grid. With it we can get to an interpretation and understanding of the meaning and qualites of Grid dwelt in Modernism thst transformed the structure of Painterly Grid originally as a plane concept to the third dimentionl structure. And then, the fourth chapter, we try to draw a new meaning andre-interpretation of the Formal-Grid as a representatuinnal structure appeared in the post-modernist paintings, going with its deconstructional situation. Therefore, we can, in our study on Grids, see the various points of view in the interpretation of them as illusion-structure, as plane-structure, and as cubic-structure; its concept differs form times, oscillating between its formation and deconstruction. The Grid, as we have seen in my dissertation, contains various problems and significations in art that deserve to investigate throughly, including some important plastic problem such as space and plane, and, in the case of do-grid, time. We may expect new concepts of it that will have difference meanings. 1 hope my study makes some contributions to understanding the coordination of the abstruse modern and contemporary art.

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A study of using physical body in Contemporary Painting (현대회화에서 신체성의 활용에 관한 연구)

  • Park Ki-Woong
    • Journal of Science of Art and Design
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    • v.6
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    • pp.140-202
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    • 2004
  • Body means 1)the whole structure and substance of a man, animal, or plant 2) the trunk or torso of a man or animal 3) part of garment that covers the trunk 4) the fresh or material substance, as opposed to the spirit. Human body could be distinguished as fresh and spirit. Body has the meaning of physicality. Physical means the bodily and constitution, but in the meaning of constitution there is the content of spirituality. Physicality means the appearing or arising of trace or image or nuance of body. The paintings which are using bodies are 1) directly draw bodies 2) twisting or transformation or nuance of the body and highly upgrade the physical emotion or fantastic bodily nuance 3) directly rubbing artist's body on the surface of painting with pigments to elect tactile specification. These physical art have appeared broadly by various artists, mainly with the social aspects of sex, drug, psycho sexual issues. In case of Joel peter Whitkin, the reason of strong physicality in the art is from the mind of the rejection and resistance of real world which is targeting top, perfect and beauty. Further explanation, being the world which is separated top and under, men and women, beauty and ugly; further in the situation, the hierarchy, terror and pressure began and many difficult problems has derived. The contents of attacking feminists's art works are very obscene to reveal female and male's phallus strongly. Sometime, it is strongly related in the political issues. The physical paintings have strong meanings in the action by hands and feet. It supports that it could reveal the humanity with smell, breath, and traces of bodies. In the bodies, the origin of life begins which gives human life by blood lines and water. Sometime, the physical paintings are made by the blood and urine to stick the physicality for special nuance. The physical paintings are made by the image of penis and clitoris which are related in the image of urinating, ejaculation and sometime is symbolized as pens and candles to drop liquid. The selected painters who are related in physical painting are Jackson Pollock, Andrea Serano, Eve Klein, Francis Bacon, Francesco Clemente, Lichard Long, Jakes & Dinos Chapman, Anselm Kiefer, Kiki Smith and Park, Ki Woong. Francis Bacon's style is destructive in representing human shapes which give us special message about the unbearable activity of men politician, high brain, wealthy and religious people. Francesco Clemente's method is to use throat, ear hole, mouse, clitoris, belly nostrils and every holes of body to transmute human physical body. Lichard Long uses directly his body in drawing the surface of painting by using liquid of mud Jakes & Dinos Chapman destroys or transforms the bodies of human. It sometime appears wrong location of the bodies that the penis and vulva is in between human faces or nose of women, Anselm Kiefer uses human hair for representing the human decaying martyrs, and indirectly using straw, he gives special ritual action to repent the Nazi's fault. From 2002 to 2003, Park KI Woong used women womb images to intermingle the smoke shape of <9.11 terror, 2001> in New York to reveal the painful situation of the time(*).

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Measurement of minimum line width of an object fabricated by metal 3D printer using powder bed fusion type with stainless steal powder (스테인리스강을 사용한 분말 적층 용융 방식의 금속 3차원 프린터에서 제작된 물체의 최소 선폭 측정)

  • Son, BongKuk;Jeong, Youn Hong;Jo, Jae Heung
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.19 no.10
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    • pp.346-351
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    • 2018
  • Metal three-dimensional (3D) printing technologies are mainly classified as powder bed fusion (PBF) and direct energy deposition (DED) methods according to the method of application of a laser beam to metallic powder. The DED method can be used to fabricate fine and hard 3D metallic structures by applying a strong laser beam to a thin layer of metallic powder. The PBF method involves slicing 3D graphics to be a certain height, laminating metal powders, and making a 3D structure using a laser. While the DED method has advantages such as laser cladding and metallic welding, it causes problems with low density when 3D shapes are created. The PBF method was introduced to address the structural density issues in the DED method and makes it easier to produce relatively dense 3D structures. In this paper, thin lines were produced by using PBF 3D printers with stainless-steel powder of roughly $30{\mu}m$ in diameter with a galvano scanner and fiber-transferred Nd:YAG laser beam. Experiments were carried out to find the optimal conditions for the width of a line depending on the processing times, laser power, spot size, and scan speed. The optimal conditions were two scanning processes in one line structure with a laser power of 30 W, spot size of $28.7{\mu}m$, and scan speed of 200 mm/s. With these conditions, a minimum width of about $85.3{\mu}m$ was obtained.

The approach of properties-flavours theory and the study of morphological standard in ARTEMISIAE HERBA (인진호(茵陳蒿)의 기미론(氣味論)적 해석과 내외부형태연구)

  • Lee, Hwa-Jung;Choi, Mun-Il;Kim, Ja-Young;Kang, Kyoung-Sik;Shin, Chol-Gyun;Jul, Young-Sung;Yun, Ju-Bong
    • The Journal of Korean Medicine Ophthalmology and Otolaryngology and Dermatology
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    • v.19 no.2
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    • pp.130-145
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    • 2006
  • Objectives : The aim of this work is the approaching of properties-flavours theory and the making of morphological standard in Artemisiae herba. Methods : The properties-flavours theory were attempted with bibliographic method and various climate-information. The external-internal morphological standards were determined by using stereoscope and butanol series. Conclusions : The following is a list the conclusion of the approaching of properties-flavours theory and how to make the standard of morphological standard in artemisiae herba. 1. The significant analysis for the artemisiae herba as the properties-flavours theory, is a follow-up survey of the effect written in the official oriental medicine book 2. The other analytic methods according to the gathering time, processing or storing system or especially nature or growth environment(altitude, temperature,. the mean moisture, and the agronomical survey) by way of the explanation of properties-flavours theory appears so many insufficiency at the many cases. 3. In the case of artemisiae herba., there are 2 cases(Artemisia capillaris $T_{HUNB}$ and A. iwayomogi $K_{ITAMURA}$) in current and recently A. aruwa L. is substituted for artemisiae herba in circulation. 4. The external and internal characteristics according to the shape of original plant or herbal states, entirely correspond to all the official oriental medicine boo 5. According to the place of productiot the difference appeals. (1) A. capillatis $T_{HUNB}$. has leaves like a fine thread, and A. iwayomogi $K_{ITAMURA}$ has big and wide leaves, and shows some reddish color, and A. aruwa L. has narrow leaves, its section lines long vertically. (2) In the internal shapes, as the A. capillatis $T_{HUNB}$. leaves', upper epidermal cell wall shows relatively straight form, its all upper- lower epidemical cell wall has a stoma, and calcium rosette crystal is relatively few. As iwayomogi $K_{ITAMURA}$, all upper- lower epidermal cell wall is wavelike concave, and hypodermics has many stoma and many calcium rosette crystal. (3) In the internal shapes of A. aruwa L. the shape of leaves' epidermal cell is irregular and has so many non-glandular hair nad glandular hair on its surface.

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Development of New Cultivars 'JangsungChorok' and 'JangsungSaetbyeol' in Zoysiagrass (한국잔디 신품종 '장성초록(JangsungChorok)'과 '장성샛별(JangsungSaetbyeol)' 개발)

  • Choi, Joon-Soo;Yang, Geun-Mo;Oh, Chan-Jin;Lee, Geung-Joo;Bae, Eun-Ji;Lee, Kwang-Soo
    • Weed & Turfgrass Science
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    • v.7 no.3
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    • pp.231-238
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    • 2018
  • This study was carried out to develope new zoysiagrass cultivars 'JangsungChorok' (Application No. :2013-3) and 'JangsungSaetbyeol' (Application No. :2013-4). One hundred and one genetic resources were collected at Jangsung Gun area from 2010 to 2011. Among the collected lines, CY6097 (JangsungChorok) and CY6069 (JangsungSaetbyeol) showed superior performance in spring green up and growth rate. 'JangsungChorok' showed genetically light green leaf color, with medium leaf width (4.4 mm), height from ground to first leaf blade of 3.2 cm and average plant height of 18 cm. Fast recovery rate and early spring green up rate will make this cultivar (JangsungChorok) for efficient sod producer. 'JangsungSaetbyeol' showed genetically dark green leaf color, with fine to medium leaf width of 3.5 mm, height from ground to first leaf blade of 4.3 cm and average plant height of 22.6 cm. Fast recovery rate and early spring green up rate with relatively narrow leaf will make this cultivar (JangsungSaetbyeol) for high sod quality.

The Error Diffusion halftoning Method Using Information of Edge Enhancement (에지 강조 정보를 이용한 오차확산 해프토닝)

  • Kwak Nae Joung;Ahn Jae Hyeong
    • Journal of the Institute of Electronics Engineers of Korea SP
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    • v.42 no.3 s.303
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    • pp.107-114
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    • 2005
  • Edge enhanced image is needed for processing images for special purpose such as a circuit diagram or a design composed of lines. Error diffusion halftoning, among digital halftoning methods to represent a continuous grayscale image for the binary output device such as printers, facsimiles, LCD televisions and etc. also makes edges of objects blurred. This paper proposes the method to enhance the edge of a binary image for the binary output device as well as a circuit diagram or a design. Based on that the human eyes perceive the local average luminance rather than the pixel's luminance itself, the proposed system uses a local activitymeasure (LAM), which is the difference between a pixel luminance and the average of its $3{\times}3$ neighborhood pixels' luminances weighted according to the spatial positioning. The system also usesinformation of edge enhancement(IEE), which is computed from the LAM multiplied by the average luminance. The IEE is added to the quantizer's input pixel and feeds into the halftoning quantizer. The quantizer produces the halftone image having the enhanced edge. The simulation results show that the proposed method produces more fine halftoning images than conventional methods due to the enhanced edges. Also the performance of the proposed method is compared with that of the conventional method by measuring the edge correlation and the local average accordance over a range of viewing distances.

A Study on the Seepage Behavior of Embankment with Weak Zone using Numerical Analysis and Model Test (취약대를 가진 모형제방의 침투거동에 관한 연구)

  • Park, Mincheol;Im, Eunsang;Lee, Seokyoung;Han, Heuisoo
    • Journal of the Korean GEO-environmental Society
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    • v.17 no.7
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    • pp.5-13
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    • 2016
  • This research is focused on the seepage behavior of embankment which had the weak zone with big permeability. The distributed TDR (Time Domain Reflectometer) and point sensors such as settlement gauge, pore water pressuremeter, vertical total stressmeter, and FDR (Frequency Domain Reflectometer) sensor were used to measure the seepage characteristics and embankment behavior. Also, the measured data were compared to the data of 2-D and 3-D numerical analysis. The dimension of model embankment was 7 m length, 5 m width and 1.5 m height, which is composed of fine-grained sands and the water level of embankment was 1.3 m height. The seepage behavior of measuring and numerical analysis were very similar, it means that the proper sensing system can monitor the real-time safety of embankment. The result by 2-D and 3-D numerical analysis showed similar saturation processing, however in case of weak zone, the phreatic lines of 2-D showed faster movement than that of 3-D analysis, and finally they converged.