• Journal of Microbiology and Biotechnology
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• v.16 no.2
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• pp.240-246
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• 2006

Cyanobacteria are present abundantly in rice fields and are important in helping to maintain rice fields fertility through nitrogen fixation. Many rice fields soil contain a high density of cyanobactera, and over 50% of cyanobacterial genera that are in existence in rice paddy fields are heterocystous filamentous forms. A total of 142 isolates of heterocystous filamentous cyanobacteria were screened from 100 soil samples taken from rice paddy fields in 10 different locations across Korea, classified according to their morphological characteristics under light microscopy, and their susceptibly to fungicides examined. The collected blue-green alga were classified into a total of 14 genera, including seven genera of filamentous cyanobacteria and seven genera of nonfilamentous cyanobacteria. In particular, 142 heterocystous filamentous cyanobacteria were isolated and classified into six genera, including Anabaena, Nostoc, Calothrix, Cylindrospermum, Nodularia, Scytomena, and Tolypotrix. Yet, over 90% of the heterocystous filamentous cyanobacteria isolated from the rice paddy fields belonged to two genera: Anabaena and Nostoc. The response of 129 $N_2-fixing$ cyanobacterial isolates, 53 Anabaena and 76 Nostoc, to 10 fungicides was then investigated. The results showed that the Nostoc spp. were more tolerant of the ten tested fungicides than the Anabaena spp., and among the ten tested fungicides, benomyl showed the highest acute toxicity to Anabaena spp. and Nostoc spp. In conclusion, although benomyl is a very useful agent to control phytopathogenic fungi, the application of this fungicide to rice fields should be considered because of its toxicity to the heterocystous filamentous cyanobacteria.

• Journal of Ecology and Environment
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• v.38 no.4
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• pp.619-627
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• 2015

Cyanobacteria were sampled at five sites in the Han River, Nakdong River, and Geum River watershed from June 2014 to May 2015 and then cultivated. Two genera and five species of the cyanobacteria were newly recorded in Korea. The newly recorded species were Limnothrix redekei, Pseudanabaena galeata, Pseudanabaena amphigranulata, Sphaerospermopsis aphanizomenoides, and Calothrix parietina. As a result, the Korean flora of the cyanobacteria now include four orders, 22 families with 73 genera, 143 species, and two varieties, giving a total of 146 taxa.

• Journal of environmental and Sanitary engineering
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• v.15 no.1
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• pp.1-6
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• 2000

A milky gray scum was observed at some water area of the lake Daecheong in the summer of 1997 and 1998. To identify a causing organism of scum and affecting factors, we observed the scum material by a phase contrast microscope and surveyed the phsico-chemical water quality during the outbreak of scum. The scum was found out to be clogging cysts of amoeboid protozoan, Asterocaelum sp.(Protozoea Sarcodina Aconchulinida), grazer of filamentous cyanobacteria, Anabaena genus. The protozoan scum appeared during Anabaena bloom period, which continued for a while. This protozoan was presumed acting as a regulator of Anabaena bloom in the lake Daecheong during the summer season. Moreover this is the first report on Asterocaelum sp. a grazing filamentous cyanobacteria occurred in Korean freshwater.

• Journal of Microbiology
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• v.35 no.3
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• pp.181-187
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• 1997

Filamentous cyanobacteria are an ecologically important group of bacteria because they are able to provide both organic carbon fixed nitrogen that can support the nutritional requirements for other microorganisms. Because of their prokaryotic nature, they can also be used as potentially powerful model systems for the analysis of oxygenic photosynthesis and nitrogen fixation. Gene transfer is an indispensable procedure for genetic analysis of filamentous cyanobacteria. Electroporation was used to introduce foreign DNA into cyanobacterial cells. In experiments designed to optimize the electroporation technique, the effects of the field strength (amplitude of pulse) and time constant (duration of pulse), DNA concentration and host restriction/modification of DNA on the efficiency of electro-transformation were investigated. The results of this research revelaed that a high voltage pulse of short duration was effective for the electro-transformation of Anabaene sp. M131. The maximal number of transformants was obtained at 6 kV/cm with a pulse duration of 5 msec. The efficiency of electro-transformation was also sensitive to concenetration of DNA; even small amounts of DNA (0.01 .mu.g/ml) were able to gie a large number of transformants (1.0 * 10$\^$3/ cfu/ml).

• Journal of Korean Society on Water Environment
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• v.29 no.4
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• pp.551-558
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• 2013

The feasibility of water supply as in-stream flow for Mangwall stream was analyzed in terms of water quality and cultivation periphyton using two different types of water resources (e.g., surface water and bank filtration from Han River basin) and three different types of media (e.g., tile, concrete and pebble). The concentrations of organic and inorganic contaminants from the bank filtration were lower than those from surface water by 17.5 - 55.0%. Using water samples collected from Mangwall stream, surface water, and bank filtration, chlorophyll-a, phaeopigment, and growth rate of periphyton were investigated. During 30 day incubation for each water sample, it was observed that filamentous cyanobacteria, Oscillatoriaceae, accounted for 98%, and water velocity of 5 cm/s was optimum for the in situ filamentous cyanobacteria growth. Also, it was deducted for water velocity and chl-a to have an inverse correlation. Meanwhile, the greater the specific surface area of media, the higher the concentration of chl-a. From these results, both water velocity and specific surface area of media should be considered as an combined parameter to deter the growth of filamentous cyanobacteria.

• Molecules and Cells
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• v.43 no.6
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• pp.509-516
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• 2020

To perceive fluctuations in light quality, quantity, and timing, higher plants have evolved diverse photoreceptors including UVR8 (a UV-B photoreceptor), cryptochromes, phototropins, and phytochromes (Phys). In contrast to plants, prokaryotic oxygen-evolving photosynthetic organisms, cyanobacteria, rely mostly on bilin-based photoreceptors, namely, cyanobacterial phytochromes (Cphs) and cyanobacteriochromes (CBCRs), which exhibit structural and functional differences compared with plant Phys. CBCRs comprise varying numbers of light sensing domains with diverse color-tuning mechanisms and signal transmission pathways, allowing cyanobacteria to respond to UV-A, visible, and far-red lights. Recent genomic surveys of filamentous cyanobacteria revealed novel CBCRs with broader chromophore-binding specificity and photocycle protochromicity. Furthermore, a novel Cph lineage has been identified that absorbs blue-violet/yellow-orange light. In this minireview, we briefly discuss the diversity in color sensing and signal transmission mechanisms of Cphs and CBCRs, along with their potential utility in the field of optogenetics.

• Journal of Korean Society on Water Environment
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• v.34 no.5
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• pp.503-513
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• 2018

Freshwater cyanobacterial genus Dolichospermum is one of the most commonly spotted types of phytoplankton, whereas a limited number of studies on morphology of Dolichospermum spp. have been performed in South Korea. The purpose of this study is to investigate the succession pattern of cyanobacteria after weir construction, as well as morphological characteristics of Dolichospermum spp. from natural samples collected in the weir regions of Nakdong River. A total of 31 cyanobacterial taxa observed in this study were classified as belonging to 15 genera, 5 families, and 3 orders. Among them, morphological characteristics in the four species were classified into genus Dolichospermum, for most of the planktic former members of the genus Anabaena, were observed through light microscopy. Water bloom frequently occurred in the middle region of Nakdong River, the maximum number of cyanobacterial species appeared in the lower region of Nakdong River. The appearance of order Chrooccocales was only observed during summer when population density of Microcystis aeruginosa reached an annual peak. In contrast, filamentous cyanobacteria was observed throughout the whole year, even if when water temperature was lower than $5^{\circ}C$. It implied that the low-temperature-adapted filamentous cyanobacteria can grow in a range of water temperatures. Coil diameter of D. crassum from natural samples was $75{\sim}140{\mu}m$ ($ave.=91.3{\mu}m$; n = 94), slightly larger than those reported by previous studies. Dolichospemum smithii ($Kom{\grave{a}}rek$) Wacklin et al. 2009, was described for the first time in Nakdong River.

• Journal of Species Research
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• v.11 no.1
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• pp.10-21
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• 2022

Two strains of cyanobacteria were isolated from the soil of Seodaemun-gu, Seoul and from the gravel of the Ansung Stream, Gyeonggi Province, Korea, respectively. They were identified as Pantanalinema rosaneae and Alkalinema pantanalense under the Leptolyngbyaceae through the morphological, ecological, and molecular analyses and first reported in Korea. Belonging to the Leptolyngbya morphotypes, they are thin filamentous cyanobacteria and morphologically indistinguishable cryptic species. The strains of P. rosaneae and A. pantanalense isolated in Korea revealed the same cluster as their type species in the phylogenetic analysis using the 16S rRNA gene sequences, and similarities in the secondary structures of 16S-23S ITS sequences. Although both P. rosaneae and A. pantanalense were collected from water samples in the Pantanal wetland of Brazil, the P. rosaneae obtained in Korea, was soil-dwelling subaerophytic species whereas A. pantanalense was epilithic species living on gravel in the freshwater. Therefore, they are considered to have an extensive habitat.

• Journal of Korean Society on Water Environment
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• v.34 no.6
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• pp.661-668
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• 2018

Geosmin is volatile metabolites produced by a range of filamentous cyanobacteria which causes taste and odor problems in drinking water. Molecular ecological methods which target biosynthetic genes (geoA) are widely adopted to detect geosmin-producing cyanobacteria. The aim of this study was to investigate the potential production capability of 8 strains isolated from the Nakdong River. Ultimately, a suggestion for a genetical monitoring tool for the identification of geosmin producers in domestic waters was to be made. Geosmin was detected using solid phase microextraction gas chromatography mass spectrometry (SPME GC-MS) in two strains of Dolichospermum plactonicum (DGUC006, DGUC012) that were cultured for 28 day. The highest concentrations during the experiment period was $17,535ngL^{-1}$ and $14,311ngL^{-1}$ respectively. Additionally, geoA genes were amplified using two primers (geo78F/971R and geo78F/982R) from strains shown to produce geosmin, while amplification products were not detected in any of non-producing strains. PCR product (766 bp) was slightly shorter than the expected size for geosmin producers. According to the BLAST analysis, amplified genes were at nucleotide level with Anabaena ucrainica (HQ404996, HQ404997), Dolichospermum planctonicum (KM13400) and Dolichospermum ucrainicum (MF996872) between 99 ~ 100 %. Both strains were thus confirmed as potential geosmin-producing species. We concluded that the molecular method of analysis was a useful tool for monitoring potential cyanobacterial producers of geosmin.

• Korean Journal of Soil Science and Fertilizer
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• v.37 no.3
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• pp.177-183
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• 2004

The discharge of waste nutrient solution from greenhouse to natural ecosystem leads to the accumulation of excess nutrients that results in contamination or eutrophication. There is a need to recycle the waste nutrient solution in order to prevent the environmental hazards. The amount and kind of nutrients in waste nutrient solution might be enough to grow photosynthetic microorganisms. Hence in the present study, we examined the growth and mass cultivation of cyanobacteria in the waste nutrient solution with an objective of removing N and P and concomitantly, its mass cultivation. Four photosynthetic filamentous cyanobacteria (Anabaena HA101, HA701 and Nostoc HN601, HN701) isolated from composts and soils of the Chungnam province were used as culture strains. Among the isolates, Nostoc HN601 performed faster growth rate and higher N and P uptake in the BG-II ($NO_3{^-}$) medium when compared to those of other cyanobacterial strains. Finally, the selected isolate was tested under optimum conditions (airflow at the rate of $1L\;min^{-1}$. in 15 L reactor, initial pH 8) in waste nutrient solution from tomato hydroponic in green house condition. Results showed to remove 100% phosphate from the waste nutrient solution in the tomato hydroponics recorded over a period of 7 days. The growth rate of Nostoc HN601 was $16mg\;Chl-a\;L^{-1}$ in the waste nutrient solution from tomato hydroponics with optimum condition, whereas growth rate of Nostoc HN601 was only $9.8mg\;Chl-a\;L^{-1}$ in BG-11 media. Nitrogen fixing capacity of Nostoc HN601 was $20.9nmol\;C_2H_4\;mg^{-1}\;Chl-a\;h^{-1}$ in N-free BG-11. The total nitrogen and total phosphate concentration of Nostoc HN601 were 63.3 mg N gram dry weight $(GDW)^{-1}$ and $19.1mg\;P\;GDW^{-1}$ respectively. Collectively, cyanobacterial mass production using waste nutrient solution under green house condition might be suitable for recycling and cleaning of waste nutrient solution from hydroponic culture system. Biomass of cyanobacteria, cultivated in waste nutrient solution, could be used as biofertilizer.