• Title/Summary/Keyword: FRAGMENTATION

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Protective Effects of Chitosan on the Cadmium Cytotoxicity in Rat Glioma Cells (흰쥐 신경교종세포에서 카드뮴 세포독성에 대한 키토산의 효과)

  • 백용아;이정래;김강득;김혜원;이한솔;허정무;오재민;최민규;정연태
    • Toxicological Research
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    • v.20 no.1
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    • pp.63-69
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    • 2004
  • Casapse-3 protease is known as a key role of apoptotic enzyme, and caspase-3 activity is a central event that occurs upstream of DNA fragmentation during apoptosis. This study demonstrates that chitosan pretreatment inhibits cadmium-induced apoptosis by attenuating the activity of caspase-3. We also analyzed the protective effect of chitosan on DNA fragmentation induced by cadmium. Cadmium toxicity was examined by DNA fragmentation and nuclear condensation with Hoechst stain. Caspase-3 activities were increased cadmium treated group for 3 hours compared with control. When chitosan (150 mg/ml) was pretreated at 30 min before cadmium treatment, cadmium cytotoxicity was suppressed in a dose-dependent manner evaluated by DNA fragmentation and caspase activity. From these results, it is suggest that the protective effect of chitosan pretreatment against cadmium-induced cytotoxicity is mediated through inhibition of caspase-3 protease activation and DNA fragmentation.

A Basic Study for Forest Landscape Fragmentation Monitoring (산지경관 파편화 모니터링을 위한 기초연구)

  • An, Seung Man
    • Journal of Korean Society of Forest Science
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    • v.108 no.3
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    • pp.454-467
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    • 2019
  • This study proposed a forest landscape (patch) fragmentation monitoring framework using a cadastral forest land dataset and validated the feasibility of such monitoring. The following results were found. First, the forest landscape has fragmented too quickly. Hence, immediate national monitoring and management are required. Second, forest landscape monitoring should be linked to other survey frameworks. Horizontal fragmentation monitoring based on the forest landscape (geographic information system [GIS] polygons) is insufficient to determine ecological processes. Third, precautionary principle regulation to link forest landscape fragmentation monitoring to assessment systems such as environmental impact analysis or disaster impact analysis should follow.

Collisional Activation Dissociation Mass Spectrometry Studies of Oligosaccharides Conjugated with Na+-Encapsulated Dibenzo-18-Crown-6 Ether

  • Bae, Jungeun;Song, Hwangbo;Moon, Bongjin;Oh, Han Bin
    • Mass Spectrometry Letters
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    • v.7 no.4
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    • pp.96-101
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    • 2016
  • To determine the influence of the cationization agent on the collision activated dissociation (CAD) fragmentation behavior of oligosaccharides, the CAD spectra of the singly protonated, sodiated oligosaccharides and singly sodiated and dibenzo-18-crown-6 ether conjugated oligosaccharides were carefully compared. Each of these three different species showed quite different fragmentation spectra. The comparison of singly protonated and sodiated oligosaccharide CAD spectra revealed that different cationization agents affected the cationization agent adduction sites as well as the fragmentation sites within the oligosaccharides. When the mobility of $Na^+$ was limited by the dibenzo-18-crown-6 ether encapsulation agent, the examined linear oligosaccharides showed fragmentation patterns quite different from the unmodified ones. For the dibenzo-18-crown-6 ether conjugated oligosaccharides, the charge-remote fragmentation pathways were more likely to be activated than the chargedirected pathways. This work demonstrates that dibenzo-18-crown-6 ether conjugation can potentially provide a route to selectively activate the charge-remote fragmentation pathways, albeit to a limited extent, in tandem mass spectrometry studies.

Management Plan of Relationship between Land Development and Forest Fragmentation in Metropolitan Area (수도권 내 개발계획관련 요소와 산림파편화 관계분석을 통한 관리방안)

  • Lee, Dong-Kun;Kim, Eun-Young
    • Journal of the Korean Institute of Landscape Architecture
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    • v.35 no.6
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    • pp.37-47
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    • 2008
  • Recently, reckless exploitation of land resources without much consideration for the environmental value of the land has been witnessed to accommodate the ever-increasing demands for regional development. Fragmentation due to land development is a major reason for the declining biodiversity in forest ecosystems. The purposes of this study were (1) to investigate the relationship between the factors of land development and forest fragmentation in 13 watersheds of a metropolitan area and (2) to suggest a forest management plan through the relationship. We carried out a factor analysis to determine explanatory axes of forest fragmentation, and then conducted a correlation analysis between the factor scores and the factor of land development, such as the rate of built-up areas, road density, number of built-up patches, and area of housing developments. The first explanatory axis represented stability of landscape highly related with the rate of the built-up area and road density. The second axis represented the level of fragment highly related with a number of built-up patches. Forest fragmentation patterns of the 13 watersheds were classified for the similarity in forest fragmentation. This study presents the forest management plans including distribution and level of land development and forest conservation.

Inspection of the Fragmentation Pathway for Thiamethoxam

  • Son, Sunwoong;Kim, Byungjoo;Ahn, Soenghee
    • Mass Spectrometry Letters
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    • v.8 no.3
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    • pp.65-68
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    • 2017
  • Thiamethoxam is one of the main suspect in honeybee colony collapse disorder (CCD). Due to this reason, thiamethoxam including imidacloprid and clothianidin has been banned for two years in some Europe countries. The CCD phenomenon has also been reported in Korea. Regarding this issue and needs, a new project has started to develop the method for the quatitation of thiamethoxam using isotope dilution mass spectrometry (IDMS). In the process of optimization for the IDMS method with thiamethoxam and $thiamethoxam-d_3$, we observed that the fragment peaks did not correspond to the fragmentation pathway as published elsewhere. Here, we proposed a candidate fragmentation pathway. To validate the proposed fragmentation pathway, another isotope analogue, $thiamethoxam-d_4$, was introduced and the MS/MS spectra of both isotope analogues were compared. In addition, the MS/MS/MS spectra of thiamethoxam were inspected for more evidence of the candidate pathway. Those spectra indicated that the proposed fragmentation pathway could be used to assign the fragment peaks of thiamethoxam.

A Study on the 'Fragmentation-Assemblage' Design Method and Meaning found in the Architecture of David Chipperfield (데이비드 치퍼필드 건축에 나타난 '분절-집합'의 디자인 방법과 의미에 관한 연구)

  • Kim, Jong-Jin
    • Korean Institute of Interior Design Journal
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    • v.23 no.1
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    • pp.43-51
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    • 2014
  • Over the 30 years of practice, most of David Chipperfield's design projects shows that there are several unique design methods and characteristics applied in the design processes. 'Form Matters' exhibition held in London Design Museum in 2009 was crucial opportunity to summarize his architectural philosophy. The main target of this study is to analyze the Chipperfield's consistent design methods and their meaning based on his architectural philosophy. In chapter 2, his architectural background, early projects and the essence of 'Form Matters' exhibition were studied. In chapter 3, the projects built after 2000 were summarized and main design method that is 'Fragmentation & assemblage' were extracted from them. After selecting 6 case projects, each cases were analyzed in detail based on 3 analytical elements: A) Reason to segment the given volume into smaller volumes, B) Relationship between Fragmentation and Program, C) Relationship between Fragmentation-Assemblage and Interior/Exterior Space. In chapter 5, case analysis were summarized and deep meaning of design method were researched. This study founded that Chipperfield has used Fragmentation-Assemblage method to get 'flexible respond to site conditions', 'appropriate composition of program and space', 'various visual-perceptual experience through intermediary space and materiality'. As a conclusion, his unique design method has a role to logically and aesthetically spatialize all the given contextual situations into a specific architectural 'form'.

High Temperature Fiber Fragmentation Characteristics of SiC Single-Fiber Composite With Titanium Matrices

  • Matikas, Theodore E.
    • Advanced Composite Materials
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    • v.17 no.1
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    • pp.75-87
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    • 2008
  • Aerospace structural applications, along with high performance marine and automotive applications, require high-strength efficiency, which can be achieved using metal matrix composites (MMCs). Rotating components, such as jet-engine blades and gas turbine parts, require materials that maximize strength efficiency and metallurgical stability at elevated temperatures. Titanium matrix composites (TMCs) are well suited in such applications, since they offer an enhanced resistance to temperature effects as well as corrosion resistance, in addition to optimum strength efficiency. The overall behavior of the composite system largly depends on the properties of the interface between fiber and matrix. Characterization of the fiber.matrix interface at operating temperatures is therefore essential for the developemt of these materials. The fiber fragmentation test shows good reproducibility of results in determining interface properties. This paper deals with the evaluation of fiber fragmentation characteristics in TMCs at elevated temperature and the results are compared with tests at ambient temperature. It was observed that tensile testing at $650^{\circ}C$ of single-fiber TMCs led to limited fiber fragmentation behavior. This indicates that the load transfer from the matrix to the fiber occurs due to interfacial friction, arising predominantly from mechanical clamping of the fiber by radial compressive residual and Poisson stresses. The present work also demonstrates that composite processing conditions can significantly affect the nature of the fiber.matrix interface and the resulting fragmentation of the fiber.

Characterization of the Fragmentation Pattern of Peptide from Tandem Mass Spectra

  • Ramachandran, Sangeetha;Thomas, Tessamma
    • Mass Spectrometry Letters
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    • v.10 no.2
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    • pp.50-55
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    • 2019
  • The fragmentation statistics of ion trap CID (Collision-Induced Dissociation) spectra using 87,661 tandem mass spectra of doubly charged tryptic peptides are analyzed here. In contrast to the usual method of using intensity information, the frequency of occurrence of fragment ions, with respect to the position of the cleavage site and the residues at these sites is studied in this paper. The analysis shows that the frequency of occurrence of fragment ion peaks is more towards the middle of the peptide than its ends. It was noted that amino acid with an aromatic and basic side chain at N- & C- terminal end of the peptide stimulates more peaks at the lower end of the spectrum. The residue pair effect was shown when the amide bond occurs between acidic and basic residues. The fragmentation at these sites (D/E-H/R/K) stimulates the generation of the y-ion peak. Also, the cleavage site H-H/R/K stimulates the generation of b-ions. K-P environment in the peptide sequence has more tendency to generate y-ions than b-ions. Statistical analysis helps in the visualization of the CID fragmentation pattern. Cleavage pattern along the length of the peptide and the residue pair effects, enhance the knowledge of fragmentation behavior, which is useful for the better interpretation of tandem mass spectra.

Evaluation of normal morphology, DNA fragmentation, and hyaluronic acid binding ability of human spermatozoa after using four different commercial media for density gradient centrifugation

  • Lee, Dayong;Jee, Byung Chul
    • Clinical and Experimental Reproductive Medicine
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    • v.46 no.1
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    • pp.8-13
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    • 2019
  • Objective: Density gradient centrifugation (DGC) is frequently used to isolate high-motility fractions of spermatozoa. We compared the efficacy of four DGC media in terms of the percentage of morphologically normal spermatozoa, DNA fragmentation level, and hyaluronic acid (HA) binding ability. Methods: Thirty men with a total motile spermatozoa count > 80 million participated. Semen samples were divided into four aliquots, which were processed using PureSperm, PureCeption, Sidney, and SpermGrad media, respectively. The DNA fragmentation level was measured using the Halosperm assay kit and HA binding ability was measured using the HBA assay kit. Results: The mean percentage of morphologically normal spermatozoa was significantly enhanced after DGC using all four media (10.3%, 9.9%, 9.8%, and 10.7%, respectively; p< 0.05 for each when compared with 6.9% in raw semen). The DNA fragmentation level was significantly reduced after DGC using PureSperm, PureCeption, and SpermGrad media (6.0%, 6.5%, and 4.9%, respectively; p< 0.05 for each when compared with 11.2% in raw semen), but not after DGC using Sidney media (8.5%, p> 0.05). HA binding ability did not change after DGC using any of the four media. Conclusion: The four media were equally effective for obtaining a sperm fraction with highly motile, morphologically normal sperm. PureSperm, PureCeption, and SpermGrad media were equally effective for acquiring a sperm fraction with less DNA fragmentation.

A study on the fast prediction of the fragmentation zone using artificial neural network when a blasting occurs around a tunnel (인공신경망을 이용한 터널 주변 폭파 시 파쇄영역의 빠른 예측에 관한 연구)

  • You, Kwang-Ho;Jeon, Seok-Won
    • Journal of Korean Tunnelling and Underground Space Association
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    • v.15 no.2
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    • pp.81-95
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    • 2013
  • When collapse occurs due to explosion near a tunnel, fragmentation zone should be comprehended quickly to recover the function of the tunnel itself. In this study, a method to interpret explosion behavior and predict the fragmentation zone fast. For this purpose, the various 3D-meshes were generated using SolidWorks and explosion analyses were carried out using AUTODYN. The influence of explosion variables such as source location on fragmentation volume were examined by performing sensitivity analyses. Also, a training database for an artificial neural network analysis had been established and the optimal training model was selected, and the predicted results for fragmentation volume and radius were verified. The suggested method had demonstrated that it could be effective for the fast prediction of fragmentation zone.