• Title/Summary/Keyword: Diagnostic Matrix

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Influence Measures for the Likelihood Ratio Test on Independence of Two Random Vectors

  • Jung, Kang-Mo
    • 한국데이터정보과학회:학술대회논문집
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    • 2001.10a
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    • pp.13-16
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    • 2001
  • We compare methods for detecting influential observations that have a large influence on the likelihood ratio test statistics that the two sets of variables are uncorrelated with one another. For this purpose we derive results of the deletion diagnostic, the influence function, the standardized influence matrix and the local influence. An illustrative example is given.

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Fine Needle Aspiration Cytology of Solitary Fibrous Tumor of the Pleura - Report of a case misdiagnosed as adenocarcinoma of lung - (흉막에 발생한 고립 섬유성 종양의 세침흡인 세포학적 소견 - 폐의 선암종으로 오진한 1예 보고 -)

  • Choi, Yoon-La;Oh, Young-Lyun;Lee, Mee-Sook;Han, Jung-Ho;Ahn, Geung-Hwan
    • The Korean Journal of Cytopathology
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    • v.12 no.2
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    • pp.111-115
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    • 2001
  • Solitary fibrous tumor on the pleura is rare but should be included in the differential diagnosis on a peripheral pulmonary nodule. Cytologic features of solitary fibrous tumor of the pleura is not familar to the pathologist and may be misdiagnosed as malignancy. We report fine needle aspiration cytologic(FNAC) findings of a case of solitary fibrous tumor misdiagnosed as adenocarcinoma in a 48-year-old woman. The FNAC displayed a mixture of bland-looking spindle cells and clusters of epithelioid cells, which have hyperchromatic nuclei with prominent nucleoli. The helpful finding to distinguish It from other circumscribed benign and malignant lesions is the presence of fibromyxoid matrix admixed with blood vessels and thin collagen fibers. Familiarity with these features is essential to avoid misdiagnosis and overtreatment.

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Accelerating Magnetic Resonance Fingerprinting Using Hybrid Deep Learning and Iterative Reconstruction

  • Cao, Peng;Cui, Di;Ming, Yanzhen;Vardhanabhuti, Varut;Lee, Elaine;Hui, Edward
    • Investigative Magnetic Resonance Imaging
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    • v.25 no.4
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    • pp.293-299
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    • 2021
  • Purpose: To accelerate magnetic resonance fingerprinting (MRF) by developing a flexible deep learning reconstruction method. Materials and Methods: Synthetic data were used to train a deep learning model. The trained model was then applied to MRF for different organs and diseases. Iterative reconstruction was performed outside the deep learning model, allowing a changeable encoding matrix, i.e., with flexibility of choice for image resolution, radiofrequency coil, k-space trajectory, and undersampling mask. In vivo experiments were performed on normal brain and prostate cancer volunteers to demonstrate the model performance and generalizability. Results: In 400-dynamics brain MRF, direct nonuniform Fourier transform caused a slight increase of random fluctuations on the T2 map. These fluctuations were reduced with the proposed method. In prostate MRF, the proposed method suppressed fluctuations on both T1 and T2 maps. Conclusion: The deep learning and iterative MRF reconstruction method described in this study was flexible with different acquisition settings such as radiofrequency coils. It is generalizable for different in vivo applications.

Medical decision making tools : Bayesian analysis and ROC analysis (의학적 의사결정 도구들에 대한 고찰 : Bayesian analysis and ROC analysis)

  • Lee Byung-Do
    • Imaging Science in Dentistry
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    • v.36 no.1
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    • pp.1-5
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    • 2006
  • During the diagnostic process of the various oral and maxillofacial lesions, we should consider the following: 'When should we order diagnostic tests? What tests should be ordered? How should we interpret the results clinically? And how should we use this frequently imperfect information to make optimal medical decisions?' For the clinicians to make proper judgement, several decision making tools are suggested. This article discusses the concept of the diagnostic accuracy (sensitivity and specificity values) with several decision making tools such as decision matrix, ROC analysis and Bayesian analysis. The article also explain the introductory concept of ORAD program.

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Sparse Matrix Computation in Mixed Effects Model (희소행렬 계산과 혼합모형의 추론)

  • Son, Won;Park, Yong-Tae;Kim, Yu Kyeong;Lim, Johan
    • The Korean Journal of Applied Statistics
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    • v.28 no.2
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    • pp.281-288
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    • 2015
  • In this paper, we study an approximate procedure to evaluate a penalized maximum likelihood estimator (MLE) for a mixed effects model. The procedure approximates the Hessian matrix of the penalized MLE with a structured sparse matrix or an arrowhead type matrix to speed its computation. In this paper, we numerically investigate the gain in computation time as well as approximation error from the considered approximation procedure.

Texture analysis of Thyroid Nodules in Ultrasound Image for Computer Aided Diagnostic system (컴퓨터 보조진단을 위한 초음파 영상에서 갑상선 결절의 텍스쳐 분석)

  • Park, Byung eun;Jang, Won Seuk;Yoo, Sun Kook
    • Journal of Korea Multimedia Society
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    • v.20 no.1
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    • pp.43-50
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    • 2017
  • According to living environment, the number of deaths due to thyroid diseases increased. In this paper, we proposed an algorithm for recognizing a thyroid detection using texture analysis based on shape, gray level co-occurrence matrix and gray level run length matrix. First of all, we segmented the region of interest (ROI) using active contour model algorithm. Then, we applied a total of 18 features (5 first order descriptors, 10 Gray level co-occurrence matrix features(GLCM), 2 Gray level run length matrix features and shape feature) to each thyroid region of interest. The extracted features are used as statistical analysis. Our results show that first order statistics (Skewness, Entropy, Energy, Smoothness), GLCM (Correlation, Contrast, Energy, Entropy, Difference variance, Difference Entropy, Homogeneity, Maximum Probability, Sum average, Sum entropy), GLRLM features and shape feature helped to distinguish thyroid benign and malignant. This algorithm will be helpful to diagnose of thyroid nodule on ultrasound images.

Development of Diagnostic Expert Systems for A Rotor System (로터시스템의 이상진단시스템에 대한 연구)

  • Kim, Sung-Chul;Kim, Sang-Pyo;Kim, Young-Jin
    • Journal of Korean Institute of Industrial Engineers
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    • v.27 no.1
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    • pp.61-68
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    • 2001
  • A rotor system is composed of a rotating shaft with supporting bearings. The rotor system is widely used in every rotating machinery such as the turbine generator and the high precision machine tools. A negligible error or malfunction in the rotor, however, can cause a catastrophic failure in the system then result in the environmental and economic disasters. A diagnosis of the rotor system is important in preventing these kinds of failures and disasters. Up to now, many researchers have devoted in the development of diagnosing tools for the system. The basic principles behind the tools are to retrieve the data through the sensors for a specific state of the system and then to identify the specific state through the heuristic methods such as neural network, fuzzy logic, and decision matrix. The proper usage of the heuristic methods will enhance the performance of the diagnostic procedure when together used with the statistical signal processing. In this paper, the methodologies in using the above 3 heuristic methods for the diagnostics of the rotor system are established and also tested and validated for the data retrieved from the rolling element bearing and journal bearing supported system.

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New Diagnostic Clues of Non-ossifying Fibroma and Fibrous Cortical Defect (비골화성 섬유종 및 섬유성 피질골 결손의 새로운 진단적 소견)

  • Cho, Jae-Hyun;Lee, Kyi-Beom;Suh, Jung-Ho;Kim, Dae-Woong;Kim, Byoung-Suck
    • The Journal of the Korean bone and joint tumor society
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    • v.5 no.3
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    • pp.155-161
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    • 1999
  • This study was performed to document the morphologic relationships between non-ossifying fibroma (NOF) and fibrous cortical defect (FCD), as well as to determine any new diagnostic clues. Eighteen patients with 21 NOFs and 14 patients with 15 FCDs found incidentally on radiography were included. The authors prospectively performed CT, MRI, or both on all subjects. The study included size, location, sclerotic property and contour of the periphery, as well as calcification of the matrix of the lesions and the distance from the lesion to the growth plate. The morphologic characteristics were thoroughly reviewed focusing on the presence of the cortical tract in the lesions. The size of the lesion and the distance from the growth plate were not correlated with the patient' age. The presence of the cortical tract was noted in 18(85.7%) out of 21 NOFs, and 10(66.7%) out of 15 FCDs. The presence of the cortical tract was correlated with the longitudinal length of the lesion and the distance from the growth plate. The presence of the cortical tract may be one of the important characteristics in NOF and FCD, and if the diagnosis of bony lesions is obscure by radiologic finding, its exsitence may be a good indicator of diagnosis for NOF or FCD.

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Evaluation of a Pretreatment Method for Two-Dimensional Gel Electrophoresis of Synovial Fluid Using Cartilage Oligomeric Matrix Protein as a Marker

  • Kong, Min-Kyung;Min, Byoung-Hyun;Lee, Pyung-Cheon
    • Journal of Microbiology and Biotechnology
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    • v.22 no.5
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    • pp.654-658
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    • 2012
  • Osteoarthritis (OA) is the most common rheumatic pathology. One of the major objectives of OA research is the development of early diagnostic strategies such as those using proteomic technology. Synovial fluid (SF) in OA patients is a potential source of biomarkers for OA. The efficient and reliable preparation of SF proteomes is a critical step towards biomarker discovery. In this study, we have optimized a pretreatment method for twodimensional gel electrophoresis (2DE) separation of the SF proteome, by enriching low-abundance proteins and simultaneously removing hyaluronic acid, albumin, and IgG. SF samples pretreated using this optimized method were then evaluated by 1DE and 2DE separation followed by immunodetection of cartilage oligomeric matrix protein (COMP), a known OA biomarker, and by the identification of 3 proteins (apolipoprotein, haptoglobin precursor, and fibrinogen D fragment) that are related to joint diseases.

Detection of MicroRNA-21 Expression as a Potential Screening Biomarker for Colorectal Cancer: a Meta-analysis

  • Jiang, Jian-Xin;Zhang, Na;Liu, Zhong-Min;Wang, Yan-Ying
    • Asian Pacific Journal of Cancer Prevention
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    • v.15 no.18
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    • pp.7583-7588
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    • 2014
  • Background: Colorectal cancer (CRC) is a major cause of cancer-related death and cancer-related incidence worldwide. The potential of microRNA-21 (miR-21) as a biomarker for CRC detection has been studied in several studies. However, the results were inconsistent. Therefore, we conducted the present meta-analysis to systematically assess the diagnostic value of miR-21 for CRC. Materials and Methods: Using a random-effect model, the pooled sensitivity (SEN), specificity (SPE), positive likelihood ratio (PLR), negative likelihood ratio (NLR), and diagnostic odds ratio (DOR) were calculated to evaluate the diagnostic performance of miR-21 for CRC. A summary receiver operating characteristic (SROC) curve and an area under the curve (AUC) were also generated to assess the diagnosis accuracy of miR-21 for CRC. Q test and I2 statistics were used to assess between-study heterogeneity. Publication bias was evaluated by the Deeks' funnel plot asymmetry test. Results: A total of 986 CRC patients and 702 matched healthy controls from 8 studies were involved in the meta-analysis. The pooled results for SEN, SPE, PLR, NLR, DOR, and AUC were 57% (95%CI: 39%-74%), 87% (95%CI: 78%-93%), 4.4 (95%CI: 2.4-8.0), 0.49 (95%CI: 0.32-0.74), 9 (95%CI: 4-22), and 0.83 (95%CI: 0.79-0.86), respectively. Subgroup analyses further suggested that blood-based studies showed a better diagnostic accuracy compared with feces-based studies, indicating that blood may be a better matrix for miR-21 assay and CRC detection. Conclusions: Our findings suggest that miR-21 has a potential diagnostic value for CRC with a moderate level of overall diagnostic accuracy. Hence, it could be used as auxiliary means for the initial screening of CRC and avoid unnecessary colonoscopy, which is an invasive and expensive procedure.