• Title/Summary/Keyword: Complex Linkage

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Genomic Tools and Their Implications for Vegetable Breeding

  • Phan, Ngan Thi;Sim, Sung-Chur
    • 원예과학기술지
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    • 제35권2호
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    • pp.149-164
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    • 2017
  • Next generation sequencing (NGS) technologies have led to the rapid accumulation of genome sequences through whole-genome sequencing and re-sequencing of crop species. Genomic resources provide the opportunity for a new revolution in plant breeding by facilitating the dissection of complex traits. Among vegetable crops, reference genomes have been sequenced and assembled for several species in the Solanaceae and Cucurbitaceae families, including tomato, pepper, cucumber, watermelon, and melon. These reference genomes have been leveraged for re-sequencing of diverse germplasm collections to explore genome-wide sequence variations, especially single nucleotide polymorphisms (SNPs). The use of genome-wide SNPs and high-throughput genotyping methods has led to the development of new strategies for dissecting complex quantitative traits, such as genome-wide association study (GWAS). In addition, the use of multi-parent populations, including nested association mapping (NAM) and multiparent advanced generation intercross (MAGIC) populations, has helped increase the accuracy of quantitative trait loci (QTL) detection. Consequently, a number of QTL have been discovered for agronomically important traits, such as disease resistance and fruit traits, with high mapping resolution. The molecular markers for these QTL represent a useful resource for enhancing selection efficiency via marker-assisted selection (MAS) in vegetable breeding programs. In this review, we discuss current genomic resources and marker-trait association analysis to facilitate genome-assisted breeding in vegetable species in the Solanaceae and Cucurbitaceae families.

생명주기 관점에서 철도차량 가상확인 구현을 위한 개체 속성 연계에 관한 연구 (On the Linkage of Object Properties for the Implementation of Virtual Validation of Railway Vehicle from Life Cycle Perspective)

  • 김민중;김주욱;채우리;김영민
    • 시스템엔지니어링학술지
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    • 제20권1호
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    • pp.85-94
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    • 2024
  • As systems become more complex today, verifying the safety of complex systems is becoming increasingly important. However, validation activities using actual systems face limitations in terms of time and cost. To overcome these limitations, the functions, characteristics, and operations of physical assets can be implemented in a virtual environment similar to the real world, allowing for validation through simulations under various scenarios. By performing validation in a virtual environment, iterative tests can be conducted through simulations in a realistic virtual environment without physical models during the conceptual design phase. Tests can also be performed under malfunction conditions or extreme conditions. In this study, we introduce a verification method for railway vehicles in a virtual environment and propose a method of applying virtual verification from a life cycle perspective.

자동차공업의 입지와 지역발전에 관한 연구 -전남 율촌 산업단지를 사례로- (A Study on the Regional Development Effects by the Location of a New Automobile Assembly Plant -In the Case of Hyundai Motors Co. in Yulchon Industrial Complex, Chonnam Province-)

  • 이정록;이상석
    • 한국지역지리학회지
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    • 제4권1호
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    • pp.77-98
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    • 1998
  • 본 연구는 제조업 중에서도 지역성장 및 연관산업에 대한 파급효과가 가장 큰 부문인 자동차 산업을 대상으로 새로운 조립공장 입지가 지역경제의 성장 및 발전에 미치는 영향을 경계지리학적 관점에서 논의했다. 우리 나라의 대표적 신산업지구로 발전하고 있는 광양만권의 율촌 산업단지를 사례로, 한국 최대의 자동차 조림기업인 현대자동차의 새로운 조립공장 입지가 광주 전남의 자동차산업 전반에 어떠한 영향을 미칠 것인지, 그리고 보다 미시적 수준에서 광양만권에 어떠한 파급효과를 초래할 것인지 탐색해보고자 했다. 노동집약적 특성과 자본 및 기술집약적 특성을 동시에 지니는 자동차 조립 및 부품생산 부문을 대상으로 첫째, 조립부문-부품생산부문의 공간적 비공간적 연계 특성을 규명하고 둘께, 광주 전남지역 자동차산업의 현 주소 및 이에 대한 신설 조립공장의 파급효과를 분석하며 셋째, 신설 조립공장 입지에 따른 광양만권 역내의 부품산업 발전 가능성을 전망함으로써 지역개발의 파급효과를 극대화할 수 있는 방안을 모색해보고자 하는 것이 본 연구의 목적이다.

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Current Status of Comparative Mapping in Livestock

  • Lee, J.H.;Moran, C.;Park, C.S.
    • Asian-Australasian Journal of Animal Sciences
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    • 제16권10호
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    • pp.1411-1420
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    • 2003
  • Comparative maps, representing chromosomal locations of homologous genes in different species, are useful sources of information for identifying candidate disease genes and genes determining complex traits. They facilitate gene mapping and linkage prediction in other species, and provide information on genome organization and evolution. Here, the current gene mapping and comparative mapping status of the major livestock species are presented. Two techniques were widely used in comparative mapping: FISH (Fluorescence In Situ Hybridization) and PCR-based mapping using somatic cell hybrid (SCH) or radiation hybrid (RH) panels. New techniques, using, for example, ESTs (Expressed Sequence Tags) or CASTS (Comparatively Anchored Sequence Tagged Sites), also have been developed as useful tools for analyzing comparative genome organization in livestock species, further enabling accurate transfer of valuable information from one species to another.

Single Nucleotide Polymorphisms (SNPs) for Advanced Genomic Research in Sericulture

  • Vijayan, Kunjupillai
    • International Journal of Industrial Entomology and Biomaterials
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    • 제19권1호
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    • pp.143-154
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    • 2009
  • Single nucleotide polymorphisms (SNPs) are the most frequent form of variation in the genome of any organism. Owing to their greater abundance, they are considered useful for identifying cultivars, construction of higher density linkage maps, and detection of genes (QTLs) associated with complex agronomic traits and diseases. Although, SNPs have been used recently for constructing a high density genetic map in silkworm and a set of 118 SNPs have been identified in tasar silkworms, not much progress has been made in sericulture to utilize the vast potential of SNPs. Thus, this review mainly focuses on some of the important methods of SNP discovery, validation and genotyping. Emphasis has also been given to the possible uses of SNP genotyping in the improvement of silkworms and their host plants.

전체 운동가능구간에 걸쳐 함수가 정의된 6절 함수발생장치의 최적설계 (Optimum Design of Six-Bar Function Generators with Prescribed Functions Defined for the Entire Motion Range)

  • 이상춘;신재균
    • 대한기계학회논문집A
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    • 제26권12호
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    • pp.2527-2534
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    • 2002
  • An efficient method is proposed for the design of six-bar function generators with complex design tasks. Especially, the desired functions are defined for the entire motion ranges of the input variables. The design problem is defined as a nonlinear optimization problem. A concept of a weighted structural error is introduced for the definition of the objective function. Also simple branch identifiers are incorporated to eliminate the branch problems commonly encountered in a typical linkage synthesis problem. Two example problems of designing a Watt-II type double dwell mechanism and a Stephenson-III type double beat-up mechanism are demonstrated with numerical results. Constraints such as on the Grashof conditions and on the transmission angles are included for practical solutions.

목적계획법을 이용한 통신기기의 투자 모형

  • 백관호
    • ETRI Journal
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    • 제6권3호
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    • pp.3-8
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    • 1984
  • 본고는 복수의 목적을 지니고 있는 통신기기의 투자에 관한 의사결정 모형을 다루고 있다.주요 분석기법으로서는 선형계획법의 일종인 목적계획법을 이용하였으며 사례로서는 1980년의 자료를 기초로 하여 1981년에 있어서 자동식교환기의 지역별 배분투자 문제를 다루어 보았다. 또한 컴퓨터를 통한 모형의 분석결과 적용 가능성을 확인하였으며 1981년도의 지역별 투자비율과 상당히 유사함을 발견하였다. 본 연구에서 제시하는 모형은 비단 자동식교환기 뿐만 아니라 통신기기 전반의 투자문제, 나아가서는 목적이 다수인 의사결정 문제에 광범위하게 응용될 수 있을 것이다.

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Application of genotyping-by-sequencing (GBS) in plant genome using bioinformatics pipeline

  • Lee, Yun Gyeong;Kang, Chon-Sik;Kim, Changsoo
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2017년도 9th Asian Crop Science Association conference
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    • pp.58-58
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    • 2017
  • The advent of next generation sequencing technology has elicited plenty of sequencing data available in agriculturally relevant plant species. For most crop species, it is too expensive to obtain the whole genome sequence data with sufficient coverage. Thus, many approaches have been developed to bring down the cost of NGS. Genotyping-by-sequencing (GBS) is a cost-effective genotyping method for complex genetic populations. GBS can be used for the analysis of genomic selection (GS), genome-wide association study (GWAS) and constructing haplotype and genetic linkage maps in a variety of plant species. For efficiently dealing with plant GBS data, the TASSEL-GBS pipeline is one of the most popular choices for many researchers. TASSEL-GBS is JAVA based a software package to obtain genotyping data from raw GBS sequences. Here, we describe application of GBS and bioinformatics pipeline of TASSEL-GBS for analyzing plant genetics data.

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English Floating Quantifier Constructions: A Non-movement Approach

  • Kim, Jong-Bok;Kim, Jung-Soo
    • 한국언어정보학회지:언어와정보
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    • 제13권1호
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    • pp.57-75
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    • 2009
  • English floating quantifiers (FQ) are both limited and complex in the sense that they are introduced by a limited set of words, all, both, and each, and display free distributional possibilities. This paper provides a non-movement approach to the syntax of English floating quantifier constructions. The non-movement analysis we develop here is different from stranding movement analyses in that all the FQs are base-generated while the linkage with their antecedent refers to grammatical features such as SUBJ and PRD. The analysis avoids the postulation of abstract levels as well as empty elements in capturing the flexibility of English FQ constructions, making the grammar of English simpler.

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모바일 TV 기반의 멀티미디어 콘텐츠 복합 검색 인터페이스 설계 (Design of Complex Retrieval User Interface for Multimedia Content based on Mobile TV)

  • 변재희;문남미
    • 정보통신설비학회논문지
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    • 제9권3호
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    • pp.119-123
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    • 2010
  • Since the two-way interactive broadcasting service began, remote controllers have been fitted with 4 color buttons, which enable interaction and convenience to grow between users and content. With Currently, diverse studies on IPTV are in progress. Particularly, as the mobile market rapidly grows, studies on mobile IPTV and on linkage with other media are constantly increasing. Yet, mobile IPTV has never been studied as of now. In that sense, the present study attempted to design a mobile-based IPTV UI that is fitted with more usability and functionality of 4 color buttons and multi-dimensional search based on consistent criteria for content search. The UI designed in this study was estimated using user interface design guideline. The guideline is comprised of consistency, user centered, ease of use, forgiveness, feedback, functionality, aesthetic integrity.

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