• Title/Summary/Keyword: Comet Tail

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Detection of Irradiated Beans Using the DNA Comet Assay (DNA Comet Assay를 이용한 콩류의 방사선 조사 확인)

  • 오경남;김경은;양재승
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.29 no.5
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    • pp.843-848
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    • 2000
  • The single cell-gel electrophoresis assay (comet assay) was used to identify irradiated beans. Soy beans, kidney beans, and red beans were irradiated with $^{60}Co$ gamma rays at 0.1, 0.3, 0.5, 0.7, and 1.0 kGy. Beans were peeled out, crushed lightly, and treated with phosphate-buffered saline (PBS) to extract cells. The extracted cell suspension was mixed with agarose gel solution and spread on an agarose precoated slide. After lysis of the cells, they were subjected to microgel electrophoresis for 2 minutes, and then silver-stained. We found that the DNA fragments of the irradiated samples were stretched, migrated out of the cells, and formed tails towards the anode giving the appearance of comets, while the unirradiated or the undamaged cells formed very short or no tails. The tail lengths of irradiated samples were significantly increased as irradiation dose increased at the above 0.3 kGy.

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Changes of DNA Fragmentation by Irradiation Doses and Storage in Gamma-Irradiated Fruits (감마선 조사 과일류에서 조사선량과 저장기간에 따른 DNA Fragmentation의 변화)

  • Kim, Sang-Mi;Park, Eun-Ju;Yang, Jae-Seung;Kang, Myung-Hee
    • Journal of the Korean Society of Food Science and Nutrition
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    • v.31 no.4
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    • pp.594-598
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    • 2002
  • The changes in DNA damage were investigated during storage after irradiation. Kiwi, orange and pear were irradiated at 0.1, 0.3, 0.5, 0.7 and 1.0 kGy and stored for 3 months at 4$^{\circ}C$. The comet assay was applied to the sample seeds alt the beginning of irradiation and at the end of storage. Seeds were isolated and crushed, and the suspended cells were embedded in an agarose layer. After lysis of the cells, they were electrophoresed for 2 min and then stained. DNA fragmentation in seeds caused by irradiation was quantified as tail length and tail moment (tail length $\times$ % DNA in tail) by comet image analyzing system. Immediately after irradiation, the differences in tail length between unirradiated and irradiated fruit seeds were significant (p<0.05) in kiwi, orange and pear seeds. With in-creasing the irradiation doses, statistically significant longer extension of the DNA from the nucleus toward anode was observed. The results represented as tail moment showed similar tendency to those of tail length, but tile latter parameter was more sensitive than the former. Similarly even 3 months after irradiation, all the irradiated fruit seeds significantly showed longer tail length than the unirradiated controls. These results indicate that the comet assay could be one of the simple methods of detecting irradiated fruit seeds. Moreover, the method could detect DNA damage even after 3 months after irradiation.

Exploitation of the Dose/Time-Response Relationship for a New Measure of DNA Repari in the Single-Cell Gel Electrophoresis (Comet) Assay

  • Kim, Byung-Soo;Edler, Lutz;Park, Jin-Joo;Fournier, Dietrich Von;Haase, Wulf;Sautter-Bihl, Mare-Luise;Hagmuller, Egbert;Gotzes, Florian;Thielmann, Heinz Walter
    • Toxicological Research
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    • v.20 no.2
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    • pp.89-100
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    • 2004
  • The comet assay (also called the single-cell gel electrophoresis assay) has been widely used for detecting DNA damage and repair in individual cells. Since the conventional methods of evaluating comet assay data using frequency statistics are unsatisfactory we developed a new quantitative measure of DNA damage/repair that is based on all information residing in the dose/time-response curves of a comet experiment. Blood samples were taken from 25 breast cancer patients before undergoing radiotherapy. The comet assay was performed under alkaline conditions using isolated lymphocytes. Tail DNA, tail length, tail moment and tail inertia of the comet were measured for each patient at four doses of $\gamma$-rays (0, 2, 4 and 8 Gy) and at four time points after irradiation (0, 10, 20 and 30 min) using 100 cells each. The resulting three-dimensional dose-time response surface was modeled by multiple regression, and the second derivative, termed 2D, on dose and time was determined. A software module was programmed in SAS/AF to compute 2D values. We applied the new method successfully to data obtained from cancer patients to be assessed for their radiation sensitivity. We computed the 2D values for the four damage measures, i.e., tail moment, tail length, tail DNA and tail inertia, and examined the pairwise correlation coefficients of 2D both on the log scale and the unlogged scale. 2D values based on tail moment and tail DNA showed a high correlation and, therefore, these two damage measures can be used interchangeably as far as DNA repair is concerned. 2D values based on tail inertia have a correlation profile different from the other 2D values which may reflect different facets of DNA damage/repair. Using the dose-time response surface, other statistical models, e.g., the proportional hazards model, become applicable for data analysis. The 2D approach can be applied to all DNA repair measures, Le., tail moment, tail length, tail DNA and tail inertia, and appears to be superior to conventional evaluation methods as it integrates all data of the dose/time-response curves of a comet assay.

Heliospheric Current Sheet Probe

  • Yu, Yi
    • International Union of Geodesy and Geophysics Korean Journal of Geophysical Research
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    • v.23 no.1
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    • pp.12-17
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    • 1995
  • Space explorations by spacecraft have detected the solar wind and the interplanetary magnetic field (IMF), whose existences had been suggested to explain the narrow comet plasma tail formation before the space age. Thereafter, a global magnetic structure seperating the opposite polarity regions of IMF in the heliosphere was discovered (Wilcox and Ness, 1965). It is called helispheric current sheet (HCS). Comets have been proved as the useful heliospheric probes. Recently, another capability of comet as a probe of HCS was suggested by Yi (1994). In the process of comet plasma tail disconnection events (EDs) showing the ray folding and main tail severance between the folding rays (Brandt, 1982), the folding rays preceding DE might be the visualization of HCS draped around comet, In order to test this new idea, the association of comet Halley 16 DEs with comet crossings of HCS confirmed by spacecraft observations at the time of comet Halley apparition 1985~1986 was investigated.

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Discrimination of Irradiated Beef Using Comet Assay (Comet assay를 이용한 방사선 조사육의 판별)

  • Jeong, Seok-Kyu;Park, Jong-Heum;Ji, Seung-Taek;Park, Kum-Ju;Kim, Hai-Hong;Hyun, Chang-Kee;Shin, Heuyn-Kil
    • Korean Journal of Food Science and Technology
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    • v.32 no.4
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    • pp.747-754
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    • 2000
  • DNA damages in post-mortem bovine muscle samples caused by gamma irradiation at doses of 1 to 10 kGy were determined by Comet assay. When the cell extract was prepared in a physical method and followed by neutral lysis and neutral electrophoresis, the optimal comet images could be obtained. DNA damages were evaluated from the mean tail length, the distributions of comet images in 4 groups divided by tail length and the relative damage index (RDI) values calculated from the distribution pattern. The mean tail length and RDI value were increased by increasing the irradiation dose, and the RDI value was found to be useful as an index for discriminating of irradiation and measuring the irradiated dose. Blind tests using Korean domestic (Hanwoo) and imported beef samples showed a higher RDI value for the latter. However, the value was lower than those of irradiated samples indicating that the cause of DNA damages in the imported beef samples might be not irradiation but low-temperature treatments. It was concluded from the results of this study that the irradiated beef and its irradiated dose could be detected and predicted by Comet assay.

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Detection of Irradiated Grains Using the DNA ‘Comet Assay’ (DNA ‘Comet Assay’를 이용한 곡류의 방사선 조사 여부 확인)

  • Kim, Choong-Ki;Yang, Jae-Seung;Lee, Hae-Jung
    • Korean Journal of Food Science and Technology
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    • v.31 no.4
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    • pp.906-911
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    • 1999
  • This study was to determine whether DNA 'Comet Assay' can be applied to the detection of grains irradiated with low doses of Co-60 gamma radiation. Sesame, perilla, wheat, barley and rice were exposed to different doses of 0.1, 0.3, 0.5, 0.7 and 1.0 kGy. The cells isolated from the samples were embedded in a agarose gel on a microscope slide, lysed in lysis solution, and subjected to electrophoresis. DNA and its fragments migrated in the gel produced the characteristic pattern of DNA comet, of which the tail length was measured in a microscope. All the samples irradiated at 0.3 kGy and higher were applicable to detect post-irradiation by the tail length of their comets. Irradiated samples showed comets with long tails and their tail length increased with the dose, while unirradiated samples showed no or very short tails. Especially, sesame, perilla and wheat irradiated at 0.1 kGy could be distinguished from unirradiated samples by visual inspection of the slide in a microscope. Thus, DNA 'Comet Assay' might be applied to the detection of irradiated grains as a simple, inexpensive and rapid screening test.

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Detection of Irradiated Fruits Using the DNA Comet Assay (DNA Comet Assay를 이용한 과일의 방사선 조사 확인)

  • Oh, Kyong-Nam;Park, Jun-Young;Kim, Kyeung-Eun;Yang, Jae-Seung
    • Korean Journal of Food Science and Technology
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    • v.32 no.3
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    • pp.531-537
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    • 2000
  • The simple microgel electrophoresis of single cells, a 'comet assay', on fruit seeds enabled the rapid identification of irradiated fruits by comparing the intact non-irradiated cells and the damaged cells of irradiated fruits. Grapes and plums were irradiated with 0.1, 0.5, 0.7, 1.0 kGy and strawberries, peaches, apples, and nectarines were irradiated with only 1.0 kGy. Seeds were isolated, crushed, and the suspended cells were embedded in an agarose layer. After lysis of the cells, they were subjected to microgel electrophoresis for 2 minutes, and then stained. The DNA radiation-induced fragmentation of all the fruits stretched and migrated out of the cells forming a tail toward the anode giving the appearance of a comet, while the undamaged cells appeared as intact nuclei without tails. Grape and plum seeds irradiated at 0.5 kGy and higher showed significant increases in tail length. With increasing the irradiation doses, longer extention of the DNA from the nucleus toward the anode was observed. Strawberry, peach, apple, and nectarine seeds irradiated with 1.0 kGy also showed the longer tails than non-irradiated ones. DNA comet assay as a rapid and inexpensive screening technique could be an officially validated method for the detection of irradiated fruits.

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Changes of DNA fragmentation by Irradiation Doses and Storage in Gamma-irradiated Meats and Poultry (감마선 조사 육류, 가금류에서 저장전과 후의 조사선량에 따른 DNA fragmentation의 변화)

  • Lee, Hye-Jin;Kim, Sang-Mi;Park, Yoo-Kyoung;Yang, Jae-Seung;Kang, Myung-Hee
    • Journal of the Korean Society of Food Culture
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    • v.19 no.2
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    • pp.129-138
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    • 2004
  • The changes in DNA damage were investigated during storage after irradiation. Beef, pork and chicken were irradiated at 1.0, 3.0 and 5.0 kGy and stored for 6 months at $-20^{\circ}C$. The comet assay was applied to the sample muscles at the beginning of irradiation and at the end of storage. Muscles were isolated, sliced, and the suspended cells were embedded in an agarose layer. After lysis of the cells, they were electrophoresed for 2 min. and then stained. DNA fragmentation in tissues caused by irradiation was quantified as tail length and tail moment (tail length ${\times}$ % DNA in tail) by comet image analyzing system. Right after irradiation, the differences in tail length between unirradiated and irradiated muscles were significant(p<0.05) in beef, pork and chicken. With increasing the increasing doses, statistically significant longer extension of the DNA from the nucleus toward anode was observed. Similarly even 6 months after irradiation, all the irradiated muscles significantly showed longer tail length than the unirradiated controls. The results represented as tail moment showed similar tendency to those of tail length, but the latter parameter was more sensitive than the former. These results indicate that the comet assay could be one of the simple methods of detecting irradiated muscles. Moreover, this method suggest that using comet assay, we were able to detect DNA damage differences even after 6 months after irradiation.

방사선 조사한 근육식품 (쇠고기, 돼지고기, 토끼고기)의 DNA Comet 특성 연구

  • Seo, Jeong-Eun;Jo, Yeong-Jun;Seo, Myeong-Hui;Kim, Yeong-Ho;Lee, Nam-Hyeok;Hong, Sang-Pil;Kim, Yun-Ji
    • Proceedings of the Korean Society for Food Science of Animal Resources Conference
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    • 2005.10a
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    • pp.153-156
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    • 2005
  • 방사선 조사한 쇠고기와 돼지고기는 방사선 조사 선량이 증가함에 따라 comet tail이 증가하나 유의적으로 증가하지는 않는다. 그러나 방사선 조사한 돼지고기에서 3 kGy를 제외한 다른 조사선량과 대조구는 저장기간이 지남에 따라 comet tail이 유의적으로 증가하였다. 반면에 방사선 조사한 토끼고기는 방사선 조사 선량이 증가함에 따라 comet tail이 유의적으로 증가하나 저장기간에 대해서는 대조구를 제외하고 유의차가 없었다.

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Global Magnetohydrodynamic Simulation of a Comet : When a Comet Crosses a Heliopheric Sector Boundary

  • Yu, Yi
    • International Union of Geodesy and Geophysics Korean Journal of Geophysical Research
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    • v.22 no.1
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    • pp.6-23
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    • 1994
  • A disconnection event (DE) of the cometary plasma tail is one of most spectacular phenomena observed in comets. Yet, for years it has remained one of the great unsolved problems I astronomy and space physics. The solar wind is thought to play a major role in the creation of comet plasma tail (type Ⅰ) disconnection events. The goal of this paper is to present a mechanism that explains the disconnection event in terms of the local conditions at the comet. Comparison of the solar wind conditions and 16 DEs in Halley's comet shows that DEs are associated primarily with crossings of the heliospheric sector boundary and apparently not with any other properties of the solar wind, such as a high speed stream[Yi et al., 1994]. A 3-dimensional resistive magnetohydrodynamic simulation in this paper supports this association by showing that only front-side magnetic reconnection between the reversed interplanetary magnetic fields that exist when a comet crosses the heliospheric sector boundary [Niedner and Brandt, 1978] could reproduce the morphology of a DE, including ray formation [Brandt, 1982].

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