• 제목/요약/키워드: Colony characteristics

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Cultural Characteristics of Ectomycorrhizal Mushrooms

  • Jeon, Sung-Min;Ka, Kang-Hyeon
    • 한국균학회소식:학술대회논문집
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    • 한국균학회 2015년도 추계학술대회 및 정기총회
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    • pp.16-16
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    • 2015
  • Ectomycorrhizal (ECM) mushrooms play a major role in plant growth promotion through symbiotic association with roots of forest trees. They also provide an economically important food resource to us and therefore they have been studied for their artificial cultivation for decades in Korea. We have secured bio-resources of ECM mushrooms from Korean forests and performed their physiological studies. To investigate the cultural characteristics, the fungi were cultured under different conditions (medium, temperature, pH of the medium, inorganic nitrogen source). More than 90% of total 160 strains grew on three solid media (potato dextrose agar, PDA; sabouraud dextrose agar, SDA; modified Melin-Norkrans medium, MMN). The rate of mycelial growth on malt extract agar (MEA) was lower than those of three media (PDA, SDA, MMN). None of the Tricholomataceae strains grew on MEA. Many strains of ECM mushrooms were able to grow at the temperature range of $15{\sim}25^{\circ}C$ on PDA, while they showed poor growth at $10^{\circ}C$ or $30^{\circ}C$. In particular, the growth rates of both Gomphaceae and Tricholomataceae were significantly lower at $10^{\circ}C$ than at $30^{\circ}C$. The optimal pH of many strains was pH 5.0 when they cultured in potato dextrose broth (PDB). Fifty-seven percent of tested strains grew well on medium containing ammonium source than nitrate source. Many strains of Tricholomataceae showed a notable growth on ammonium medium than nitrate medium. Twenty-three percent of strains preferred nitrate source than ammonium source for their mycelial growth. The production and activity of two enzymes (cellulase and laccase) by ECM fungi were also assayed on the enzyme screening media containing CMC or ABTS. Each strains exhibited different levels of enzymatic activities as well as enzyme production. The number of laccase-producing strains was less than that of cellulase-producing strains. We found that 77% of tested strains produced both cellulase and laccase, whereas 2% of strains did not produce any enzymes. The morphological characteristics of mycelial colony were also examined on four different solid media. Yellow was a dominant color in mycelial colony and followed by white and brown on all culture media. ECM mushrooms formed mycelial colonies with a single or multiple colors within a culture medium depending on the strains and culture media. The most common shape of mycelial colony was a circular form on all media tested. Other families except for Amanitaceae formed an irregular colony on MMN than PDA. All strains of Tricholomataceae did not form a filamentous colony on all media. The pigmentation of culture media by mycelial colonies was observed in more than 50% of strains tested on both PDA and SDA. The degree of pigmentation on PDA or SDA was higher than MMN and brown color was dominant than yellow color. The production of exudates from mycelial colony was higher on PDA than MMN. Brown exudates were mainly produced by many strains on PDA or SDA, whereas transparent exudates were mainly produced by strains on MMN. We observed the mycelial colonies with a single or multiple textures in just one culture plate. Wrinkled or uneven colony surfaces were remarkably observed in many strains on PDA or SDA, while an even colony surface was observed in many strains on MMN. Sixty percent of Tricholomaceae strains formed wrinkled surface on PDA. However, they did not form any wrinkle on MMN plate. Cottony texture was observed in mycelia colonies of many strains. Velvety texture was often observed in the mycelial colonies on SDA than PDA and accounted for 60% of Suillaceae strains on SDA.

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균집락수가 적은 암색소성 비결핵항산균 배양의 임상적 의미 (Clinical Significance of Low-colony Count Scotochromogen Nontuberculous Mycobacteria)

  • 이정연;김미나;정희정;전경란;최희진;이혜영;정은영;오연목;이상도;김우성;김동순;김원동;심태선
    • Tuberculosis and Respiratory Diseases
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    • 제59권1호
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    • pp.39-46
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    • 2005
  • 배 경: 암색소성이면서 집락수가 적은 비결핵항산균이 분리되는 경우 실제 NTM폐질환의 원인일 가능성이 낮다고 추정되나 아직 이에 대한 보고는 없는 실정이다. 본 연구는 암색소성 저집락군 NTM배양의 임상적 의미를 알아보고자 시행되었다. 방 법 : 3개월간 항산균 검사가 의뢰된 6,898예를 대상으로 하여 분석하였으며 무작위로 집락수가 20개 이하인 경우를 저집락군으로 정의하였다. 모든 검체에서 결핵균, NTM의 배양 빈도를 확인하고, NTM에서는 암색소성 여부와 집락수를 분석하였다. NTM은 PRA법으로 동정하였으며 NTM폐질환의 진단은 미국흉부학회의 기준을 따랐다. 결 과: 총 6,898검체 중 NTM은 263(3.8%)예(206명) 결핵균은 382(5.5%)예 분리되었다. NTM 263 균주 중 암 색소성 균주는 124예(47.1%, 112명)이었다. 암색소성중 도말양성은 6예(4.8%)로 비암색소성 139균주 중 33예 (23.7%)에 비하여 의미 있게 낮았다(p<0.05). 균동정은 암색소성은 M. gordonae 83예(81.4%)가 가장 많이 분리되었고, 비암색소성은 MAC 52예(43.0%), M. abscessus 29예(24.0%), M. fortuitum complex 17예(14.0%)의 순이었다. 암색소성-저집락군 113명중 NTM폐질환은 3예 있었으나 모두 비암색소성으로 알려진 다른 균이 원인균이었다. 결 론 : 본 연구에서 암색소성-저집락 NTM은 대부분 M. gordonae였으며 NTM폐질환의 원인균이 아닌 오염균으로 추정되었다. 저집락수, 암색소성 비결핵항산균의 분리비율이 높을 경우 오염의 가능성을 생각하여 검사실의 정도관리에 최선을 다해야 할 것이다.

우리나라 토착근류균(土着根瘤菌)의 제(諸) 특성(特性) 연구(硏究) -I. 영남지역(嶺南地域) 토착(土着) 대두근류균(大豆根瘤菌)의 접종효과(接種效果)와 취락형태적(聚落形態的) 분포특성(分布特性) (Characteristics of Indigenous Rhizobium to Korean Soils -I. Symbiotic Potentials of Bradyrhizobium japonicum Populations and Their Colony Morphological Characteristics in Yeongnam Soils)

  • 강위금;;정연태
    • 한국토양비료학회지
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    • 제23권1호
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    • pp.60-66
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    • 1990
  • 영남지역(嶺南地域)의 수종(數種) 토양통(土壤統)에서 경작여부(耕作與否)에 따른 토착(土着) 대두근류균(大豆根瘤菌)의 분포특성(分布特性)을 구명(究明)하였다. 이를 위하여, 토양통(土壤統)이 서로 다른 5개(個) 지점(地點)의 경작지(耕作地)와 미경작지(未耕作地) 토양(土壤)의 대두(大豆) 접종효과(接種效果)(Soil inoculum potential)와 토착근류균(土着根瘤菌)의 취락형태적(聚落形態的) 분포특성(分布特性)을 조사(調査)하였는데 그 결과(結果)는 다음과 같았다. 1. 영남지역(嶺南地域)에 분포(分布)한 토착(土着) 대두근류균(大豆根瘤菌)의 밀도(密度)는 경작지(耕作地)의 경우 $10^4Cells/g$. soil 이상(以上)이었으나 미경작지(未耕作地)에서는 경미(輕微)하였다. 2. 경작지(耕作地) 토양(土壤)의 대두(大豆) 접종효과(接種效果)(Soil inoculum potential)는 NifTAL의 우수근류근(優秀根瘤菌) 접종제(接種劑) TAL 보다 좋았고, 대두근류균(大豆根瘤菌)의 질소고정(窒素固定) 특성면(特性面)에서 근류(根瘤) 무게가 근류수(根瘤數)를 보상(報償)하였다. 3. 토착(土着) 대두근류균(大豆根瘤菌)의 취락형태별(聚落形態別) 분포(分布)는 경작여부(耕作與否)에 따라 상이(相異)하였는데, "Dry"형(形) 기경지(旣耕地)에서, "Wet"형(形)은 미경작지(未耕作地)에서 각각(各各) 우점경향(優占傾向)을 보였다. 4. 토착(土着) 대두근류균(大豆根瘤菌)의 취락형태별(聚落形態別) 공생효과(共生效果)는 "Dry"형(形)이 "Wet"형(形)보다 좋았다. 따라서 숙전(熟田)에서의 대두생육(大豆生育)은 "Dry"형(形) 토착(土着) 대두근류균(大豆根瘤菌)의 밀도(密度)에 크게 영향(影響)을 받을 것으로 판단(判斷)되었다.

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김치 발효에 관여하는 효모의 다양성 및 역할 (Diversity and Role of Yeast on Kimchi Fermentation)

  • 강성은;김미주;김태운
    • 한국식생활문화학회지
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    • 제34권2호
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    • pp.201-207
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    • 2019
  • This review summarizes the studies on a wide variety of yeast found in kimchi and the effects of yeast on kimchi fermentation, and discusses the direction for further research. Yeast belongs to the genera Trichosporon, Saccharomyces, Sporisorium, Pichia, Lodderomyces, Kluyveromyces, Candida, Debaryomyces, Geotrichum, Kazachstania, Brassica, Yarrowia, Hanseniaspora, Brettanomyces, Citeromyces, Rhodotorula, and Torulopsis have been identified using culture-dependent methods and metagenomics analysis. The application of yeast as a starter into kimchi has resulted in an extension of shelf life and improvement of sensory characteristics due to a decrease in the amount of lactic acid. On the other hand, some yeast cause kimchi spoilage, which typically appears as an off-odor, texture-softening, and white-colony or white-film formation on the surface of kimchi. In contrast to lactic acid bacteria, there are limited reports on yeast isolated from kimchi. In addition, it is unclear how yeast affects the fermentation of kimchi and the mechanism by which white colony forming yeast predominate in the later stage of kimchi fermentation. Therefore, more research will be needed to solve these issues.

Centroid and Nearest Neighbor based Class Imbalance Reduction with Relevant Feature Selection using Ant Colony Optimization for Software Defect Prediction

  • B., Kiran Kumar;Gyani, Jayadev;Y., Bhavani;P., Ganesh Reddy;T, Nagasai Anjani Kumar
    • International Journal of Computer Science & Network Security
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    • 제22권10호
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    • pp.1-10
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    • 2022
  • Nowadays software defect prediction (SDP) is most active research going on in software engineering. Early detection of defects lowers the cost of the software and also improves reliability. Machine learning techniques are widely used to create SDP models based on programming measures. The majority of defect prediction models in the literature have problems with class imbalance and high dimensionality. In this paper, we proposed Centroid and Nearest Neighbor based Class Imbalance Reduction (CNNCIR) technique that considers dataset distribution characteristics to generate symmetry between defective and non-defective records in imbalanced datasets. The proposed approach is compared with SMOTE (Synthetic Minority Oversampling Technique). The high-dimensionality problem is addressed using Ant Colony Optimization (ACO) technique by choosing relevant features. We used nine different classifiers to analyze six open-source software defect datasets from the PROMISE repository and seven performance measures are used to evaluate them. The results of the proposed CNNCIR method with ACO based feature selection reveals that it outperforms SMOTE in the majority of cases.

Hypoxic condition enhances chondrogenesis in synovium-derived mesenchymal stem cells

  • Bae, Hyun Cheol;Park, Hee Jung;Wang, Sun Young;Yang, Ha Ru;Lee, Myung Chul;Han, Hyuk-Soo
    • 생체재료학회지
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    • 제22권4호
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    • pp.271-278
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    • 2018
  • Background: The chondrogenic differentiation of mesenchymal stem cells (MSCs) is regulated by many factors, including oxygen tensions, growth factors, and cytokines. Evidences have suggested that low oxygen tension seems to be an important regulatory factor in the proliferation and chondrogenic differentiation in various MSCs. Recent studies report that synovium-derived mesenchymal stem cells (SDSCs) are a potential source of stem cells for the repair of articular cartilage defects. But, the effect of low oxygen tension on the proliferation and chondrogenic differentiation in SDSCs has not characterized. In this study, we investigated the effects of hypoxia on proliferation and chondrogenesis in SDSCs. Method: SDSCs were isolated from patients with osteoarthritis at total knee replacement. To determine the effect of oxygen tension on proliferation and colony-forming characteristics of SDSCs, A colony-forming unit (CFU) assay and cell counting-based proliferation assay were performed under normoxic (21% oxygen) or hypoxic (5% oxygen). For in vitro chondrogenic differentiation, SDSCs were concentrated to form pellets and subjected to conditions appropriate for chondrogenic differentiation under normoxia and hypoxia, followed by the analysis for the expression of genes and proteins of chondrogenesis. qRT-PCR, histological assay, and glycosoaminoglycan assays were determined to assess chondrogenesis. Results: Low oxygen condition significantly increased proliferation and colony-forming characteristics of SDSCs compared to that of SDSCs under normoxic culture. Similar pellet size and weight were found for chondrogensis period under hypoxia and normoxia condition. The mRNA expression of types II collagen, aggrecan, and the transcription factor SOX9 was increased under hypoxia condition. Histological sections stained with Safranin-O demonstrated that hypoxic conditions had increased proteoglycan synthesis. Immunohistochemistry for types II collagen demonstrated that hypoxic culture of SDSCs increased type II collagen expression. In addition, GAG deposition was significantly higher in hypoxia compared with normoxia at 21 days of differentiation. Conclusion: These findings show that hypoxia condition has an important role in regulating the synthesis ECM matrix by SDSCs as they undergo chondrogenesis. This has important implications for cartilage tissue engineering applications of SDSCs.

Developmental Characteristics of Bumblebee, Bombus ignitus by the First Oviposition Day

  • Yoon, Hyung-Joo;Kim, Sam-Eun;Kim, Young-Soo;Lee, Sang beom;Shim, Ha-Sik;Park, In-Gun;Kim, Keun-Young
    • 한국잠사학회:학술대회논문집
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    • 한국잠사학회 2003년도 International Symposium of Silkworm/Insect Biotechnology and Annual Meeting of Korea Society of Sericultural Science
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    • pp.120-122
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    • 2003
  • It was investigated whether developmental characteristic of foundation queens of Bombus ignitus collected in the 11 localities including Jeongsun have any effects by the first oviposition days. Materials and Methods: materials - insect : foundation queens of Bombus ignitus collected in the 11 localities. Methods - we investigated the rate of colony foundation, progeny-queen production and the number of adults emergence for the relationship between first oviposition day and colony development of B. ignitus (omitted)

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경상북도지역 학교지하수 및 정수기통과수의 수질특성에 관한 연구 (A Study on the Characteristics of Water Quality for Groundwater and Purified Water of Several Schools in Gyeongsangbukdo Province)

  • 김숙찬;배헌균
    • 한국환경과학회지
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    • 제20권5호
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    • pp.575-580
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    • 2011
  • This study characterized water quality of groundwater and purified water used for drinking water in 30 schools in Gyeongsangbukdo Province. The results of the study showed that 43% of groundwater and 45% of purified water were not suitable for drinking. Among them, microbial contaminations were the most serious problem. In raw groundwater, the exceeding rates of total colony counts was the highest in August (53.6%). Purified water samples showed higher rate of exceeding drinking water standard for total colony counts while showing lower rate of exceeding drinking water standard for total coliforms and fecal coliforms in March and August. Overall, proper managements for microbial contaminations are required for both groundwater and purified water. Furthermore, special attention should toward students not to drink water when groundwater or purified water exceeds the drinking water quality standard.

중소 제조기업을 위한 엑셀기반 스케쥴링 시스템 (An Excel-Based Scheduling System for a Small and Medium Sized Manufacturing Factory)

  • 이창수;최경일;송영효
    • 품질경영학회지
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    • 제36권2호
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    • pp.28-35
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    • 2008
  • This study deals with an Excel-based scheduling system for a small and medium sized manufacturing factory without sufficient capability for managing full-scale information systems. The factory has the bottleneck with identical machines and unique batching characteristics. The scheduling problem is formulated as a variation of the parallel-machine scheduling system. It can be solved by a two-phase method: the first phase with an ant colony optimization (ACO) heuristic for order grouping and the second phase with a mixed integer programming (MIP) algorithm for scheduling groups on machines.