• Journal of Life Science
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• v.25 no.6
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• pp.680-685
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• 2015

Previously, cellulase and xylanase producing microorganism, Bacillus subtilis NC1, was isolated from soil. Based on the 16S rRNA gene sequence and API 50 CHL test the strain was identified as Bacillus subtilis, and named as B. subtilis NC1. We cloned and sequenced the genes for cellulase and xylanase. Plus, the deduced amino acid sequences from the genes of cellulase and xylanase were determined and were also identified as glycosyl hydrolases family (GH) 5 and 30, respectively. In this study to optimize the medium parameters for cellulase production by B. subtilis NC1 the RSM (response surface methodology) based on CCD (central composite design) model was performed. Three factors, tryptone, yeast extract, and NaCl, for N or C source were investigated. The cellulase activity was measured with a carboxylmethyl cellulose (CMC) plate and the 3,5-dinitrosalicylic acid (DNS) methods. The coefficient of determination (R²) for the model was 0.960, and the probability value (p=0.0001) of the regression model was highly significant. Based on the RSM, the optimum conditions for cellulase production by B. subtilis NC1 were predicted to be tryptone of 2.5%, yeast extract of 0.5%, and NaCl of 1.0%. Through the model verification, cellulase activity of Bacillus subtilis NC1 increased from 0.5 to 0.62 U/ml (24%) compared to the original medium.

• Applied Biological Chemistry
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• v.50 no.2
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• pp.87-94
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• 2007

A bacterium which has high enzymatic activities such as amylase, cellulase and protease was isolated from Korean traditional soybean food, doenjang. The isolated bacterium was identified to Bacillus subtilis HS25 by the test of morphological and biochemical properties according to Bergey's Manual of Systematic Bacteriology and API 50 CHL kit, and by the 16S rDNA sequence. The isolated B. subtilis HS25 had a potent antibacterial activity against food born causative or pathogenic bacteria. B. subtilis HS25 is endospore forming cell and contained flagella and abundant viscous material at the out layer of cell wall. It was rod type bacterium $(0.5{\sim}0.8{\times}3{\sim}5{\mu}m)$ having biochemical characteristics such as gram staining(+), catalase(+), oxidase(-) and hydrolysis of esculin(+). The optimal medium compositions for production of antibacterial substance in the B. subtilis HS25 were 1% of soluble starch, 0.5% of yeast extract, 0.5% of peptone and 0.05% of MgCl$_2{\cdot}6H_{2}O$. The optimum temperature and pH of the growth of the B. subtilis HS25 was 35$^{\circ}C$ and pH 7.5, respectively. The antibacterial activity was more high in neutral to a little alkaline pH (6.5-10.5) than in acidic pH. The optimal shaking speed to grow and to produce antibacterial substance of the B. subtilis HS25 was 160${\sim}$200 rpm. The optimal culture time for antibacterial activities of the bacterium were shown to be in the range of 12-36 hr.

• The Sea:JOURNAL OF THE KOREAN SOCIETY OF OCEANOGRAPHY
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• v.22 no.3
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• pp.77-87
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• 2017

Picophytoplankton, an important primary producer especially at the oligotrophic region, is known to contribute a significant portion of the total phytoplankton biomass in the East Sea of Korea. During autumn in the southwestern East Sea, frequent upwellings and oligotrophic conditions occur and annual variation of primary productivity is known to be significant. Moreover sea surface temperature (SST) of the East Sea is steeply increasing compared to global average increase, so various changes in marine ecosystem related with increase of SST are reported. Taking such circumstances into consideration, we measured the contribution from picophytoplankton fraction to total phytoplankton composition by size fraction of phytoplankton biomass during the autumn seasons from 2011, 2013 and 2015 and examined the variation of the phytoplankton composition. As a result of size fraction analyses, we found that the variation of contribution from picophytoplankton(<$3{\mu}m$) to total community of phytoplankton was high and the average fractions of picophytoplankton were measured as 38% (2011), 59% (2013), 7% (2015), respectively. The difference between measured SST and annual mean SST (${\Delta}T$) was highest ($+1.6^{\circ}C$) in autumn of 2013 and lowest ($-0.9^{\circ}C$) in autumn of 2015. The close positive correlation between ${\Delta}SST$ and fraction of picophytoplankton was confirmed($R^2$ > 0.9). The increase in SST at the southern East Sea was confirmed as one of the main environmental factors in the increase in the increase of the contribution from picophytoplankton. Monitoring of changes in the community structure of primary producers and the influences of the environmental factors including SST in the East Sea is necessary to understand the interactions of ecosystem of the East Sea and the climate change in the near future.

• Journal of the Korean Chemical Society
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• v.36 no.1
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• pp.87-94
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• 1992

The elution behavior of polystyrenes(PS), polymethylmethacrylates (PMMA), polybutadienes(PB), PS-PMMA(SM) block copolymers and PS-PB star shaped copolymers on the cross-linked polystyrene gels was studied. An interpretation was proposed for the plots of log hydrodynamic volume versus retention volume of solutes in the mobile phases such as tetrahydrofuran, toluene, chloroform, methylene chloride and tetrahydrofuran-cyclohexane mixture. In order to predict the retention of solutes from their physical properties, multiple stepwise regression analysis was applied to obtain the correlation. The distribution coefficients($K_p$) of solute-gel interactions in GPC for homopolymers and PS copolymers were also obtained in terms of network-limited separation mechanism. In the cases of PS and PB, $K_p$ values approach unity, while $K_p$ values for PMMA decrease as MW increase in the good solvent, but in poor solvent, $K_p$ values increase as MW increase. $K_p$ values of PS copolymers are dependent on their MW and composition, therefore, morohology of SM block copolymer is predicted to be random phase. A single universal plot of log[η]M vs. $(V_r-V_o)/K_p$

• Ocean and Polar Research
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• v.25 no.3
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• pp.315-329
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• 2003

During the 1st Korea-Russia Arctic Expedition from 3 to 26 August, 2000 phytoplankton biomass and nutrient concentration were measured in the Barents and Kara Seas. Total of 57 surface samples were collected f3r the phytoplankton related measurements. Chlorophyll a (chi a) concentraitons were measured to investigate the relations between physico-chemical factors and phytoplankton biomass distribution. Chl a values ranged from 0.14 to $2.34mg\;m^{-3}$ (mean of $0.65{\pm}0.42mg\;m^{-3}$) over the surface stations. The elevated values of the chi a concentrations $(1.49{\sim}2.34mg\;m^{-3})$ were found in the southeastern Barents Sea near the Pechora River. Nanoplanktonic $(<20{\mu}m)$ phytoflagellates were the important contributors for the increase of the chi a. The nano-sized phytoflagellates accounted for more than 80% of the total chi a biomass in the study area. Mean chi a concentration in the Barents Sea $(0.72{\pm}0.57 mg\;m^{-3})$ was higher than in the Kan Sea $(0.52{\pm}0.45mg\;m^{-3})$, but there was no big difference between two areas. Surface temperatures and salinities ranged from 4.1 to $11.7^{\circ}C$ (mean of $8.8{\pm}1.9^{\circ}C$) and from 23.8 to 32.5psu (mean of $30.3{\pm}1.9^{\circ}C$ psu), respectively. The physical factors were not highly correlated with phytoplankton distribution. It is speculated that the insignificant correlation between phytoplankton biomass and physical factor was due to the same current which introduced similar water mass with higher water temperature and lower salinity into the study area. The mean values of major nutrients such as ammonia, nitrite, nitrate, phosphate, and silicate were $0.42{\pm}0.31{\mu}M,\;0.10{\pm}0.03{\mu}M,\;1.44{\pm}1.03{\mu}M,\;0.35{\pm}0.12{\mu}M,\;10.99{\pm}3.45{\pm}M$, respectively. The relations between phytoplankton biomass and nutrient concentration were not close, indicating that the surface nutrient concentrations during the study seem to be controlled by other physical factors such as input of fresh water (i.e. dilution effects).

• Korean Journal of Ecology and Environment
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• v.36 no.4 s.105
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• pp.467-472
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• 2003

In this study, an algal fence was developed and applied to reduce the input of algal scum into the water intake facility. The effectiveness of vertical algal fences(overlapped three types of meshes, (312 ${\mu}m$ ${\times}$ 375 ${\mu}m$, 390 ${\mu}m$ ${\times}$ 450 ${\mu}m$, and 0,7 cm ${\times}$ 1cm; vertical depth, 1.5 m; length of fence, about 120 m)) was experimentally tested at a water intake facility (Mulgum, lower Nakdong River). The application of the fence resulted in the statistically significant difference of algal biomass between inside and outside of the fence. According to ANOVA test, chi. a concentration in Day-1showed large difference at each depth of 0, 1, 2 m (0.001> p at each depth, n = 16 respectively). Especially large difference was observed at 0 and 1 m depth. However, the fence was only effective for a short period and its efficiency declined by Day-5after the installation. When better maintenance options for the fence are prepared, e.g. mechanical installation and periodic backwashing of the fence, the performance of algal fence may be sustained. In addition, reliable models for bloom prediction are required to provide an advanced indication of the optimal timing for the installation so that effective operation would be achieved.

• Ocean and Polar Research
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• v.39 no.3
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• pp.181-194
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• 2017

The long-term linear trend of global sea-to-air dimethyl sulfide (DMS) flux was analyzed over a 16-year time span (2000~2015), based on satellite observation data. The emission rates of DMS (i.e. DMS flux) in the global ocean were estimated from sea surface DMS concentrations, which were constructed with chlorophyll a (Chl-a) concentrations and mixed layer depths (MLD), and transfer velocity from sea to air, which was parameterized with sea surface wind (SSW) and sea surface temperature (SST). In general, the DMS flux in the global ocean exhibited a gradual decreasing pattern from 2000 (a total of 12.1 Tg/yr) to 2015 (10.7 Tg/yr). For the latitude band ($10^{\circ}$ interval between $0^{\circ}$ and $60^{\circ}$), the DMS flux at the low latitude of the Northern (NH) and Southern hemisphere (SH) was significantly higher than that at the middle latitude. The seasonal mean DMS flux was highest in winter followed by in summer in both hemispheres. From the long-term analysis with the Mann-Kendall (MK) statistical test, a clear downward trend of DMS flux was predicted to be broad over the global ocean during the study period (NH: $-0.001{\sim}-0.036{\mu}mol/m^2/day\;per\;year$, SH: $-0.011{\sim}-0.051{\mu}mol/m^2/day\;per\;year$). These trend values were statistically significant (p < 0.05) for most of the latitude bands. The magnitude of the downward trend of DMS flux at the low latitude in the NH was somewhat higher than that at the middle latitude during most seasons, and vice versa for the SH. The spatio-temporal characteristics of DMS flux and its long-term trend were likely to be primarily affected not only by the SSW (high positive correlation of r = 0.687) but also in part by the SST (r = 0.685).

• Journal of the Korean Society of Food Science and Nutrition
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• v.43 no.2
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• pp.328-332
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• 2014

A survey was conducted on the isolation of lactic acid bacteria with antibacterial activity to extend kimchi shelf-life. Antibacterial activity was tested against bacteria associated with acidification of kimchi, including Lactobacillus plantarum, Pediococcus pentosaceus, and Lactobacillus sakei, using agar-well diffusion assay. Two isolates from kimchi were identified as Lactococcus lactis subsp. lactis and Lactobacillus brevis by 16S rRNA gene sequence analysis and API 50 CHL assay, and they showed antibacterial effects against indicator strains. The isolates displayed acid tolerance at pH 3.5, salt tolerance in 5% NaCl, and growth at $4^{\circ}C$. These result imply that the selected strains might be used to extend kimchi shelf-life as a potential starter.

• Korean Journal of Ecology and Environment
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• v.39 no.3 s.117
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• pp.340-351
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• 2006

To reveal physicochemical factors contributing to variation of phytoplankton communities, the study was carried out biweekly at 6 stations from Feb. 2004 to Feb. 2005 in the lower part of the Han River, Korea. As results, water temperature was changed from $0.3^{\circ}C$ to $26.6^{\circ}C$, pH: 6.6${\sim}$9.1, DO: 1.89${\sim}$22.23 mg $L^{-1}$, BOD: 0.38${\sim}$9.20 mg $L^{-1}$, COD: 1.4${\sim}$15.2 mg $L^{-1}$, Conductivity: $62.5{\sim}500.0\;{\mu}s\;cm^{-1}$, SS: 3.00${\sim}$159.3 mg $L^{-1}$, and Chl a $1.7{\sim}71.3\;{\mu}g\;L^{-1}$. Phytoplankton standing crops ranged from min. $3.6{\times}10^2\;cells\;mL^{-1}$ (July 2004, St. 3) to max. $2.3{\times}10^4\;cells\;mL^{-1}$ (Feb. 2005, St. 6), and mean of those varied from $5.9{\times}10^3\;cells\;mL^{-1}$in spring, $2.1{\times}10^3\;cells\;mL^{-1}$ in summer, $4.1{\times}10^3\;cells\;mL^{-1}$ in autumn and $8.5{\times}10^3\;cells\;mL^{-1}$ in winter, respectively. In order to investigate factors influencing the total phytoplankton standing crops a multiple regression analysis was adopted for the correlation between standing crops and environmental factors. The coefficient of determination ($R^2$) value of the regression was 0.465, it showed that environmental factors which predominantly influenced phytoplankton standing crops were water temperature, COD, $NO_2-N$, $PO_4-N$, Discharge and pH. six stations could be divided into 3 groups based on similarity index in terms of environmental factors. In ANOVA analysis for physicochemical and biological factors, water temperature, chlorophyll a, silicate, phytoplankton standing crops were the same group differed little from stations. However, Station 1and 2 were grouped followed in dissolved oxygen, conductivity, COD, nitrite, nitrate, ammonia and phosphate, and Station 3, 4 and 5 were followed in dissolved oxygen, conductivity, pH and phosphate.

• Journal of Applied Biological Chemistry
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• v.53 no.1
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• pp.51-55
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• 2010

A lactic acid bacterial strain showing fast growth and high acid production in Korean pear puree was isolated from Kimchi. This strain was analyzed by API 50 CHL kit and 16S rRNA sequencing analysis and identified as Leuconostoc (Ln.) mesenteroides KACC 91495P. Korean pear puree was fermented using Ln. mesenteroides KACC 91495P strain at $30^{\circ}C$ for 18 h. The changes of pH, titratable acidity and viable cell number during fermentation were investigated. The pH and titratable acidity were reached to pH 3.86 and 1.09% after 18 h fermentation, respectively. The viable cell population of Ln. mesenteroides KACC 91495P was rapidly increased to $2.0{\times}10^9\;CFU/g$ during the 9 h of cultivation. The contents of lactic acid, acetic acid and malic acid were determined to be 0.213, 0.259, and 0.217% after 18 h fermentation, respectively. The content of polyphenolic compounds, known as antioxidants, in pear puree were enhanced by Ln. mesenteroides KACC 91495P cultivation. The level of total polyphenolic compounds was increased to around 140% of initial concentration. When the fermented pear puree was kept at $4^{\circ}C$, pH, titratable acidity and number of viable cells population were nearly maintained for 13 days.