• 제목/요약/키워드: Chain matrix

검색결과 428건 처리시간 0.024초

TGF-$\alpha$, -$\beta$$_1$, and bFGF mRNA Expression of Lens Epithelial Cells in Senile and Diabetic Cataract

  • Hwang, Bum-Noon;Her, Jun
    • 대한의생명과학회지
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    • 제8권3호
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    • pp.127-135
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    • 2002
  • Anterior subcapsular cataract was developed by opacification with transdifferentiation and abnormal proliferation of lens epithelial cells (LECs) and pathological accumulation of extracellular matrix (ECM). After-cataract also be caused by a similar transdifferentiation of LECs remaining after surgery and the accompanying increase of ECM deposits. It is blown that prostaglandin E2 and cytokine, such as TGF-$\beta$, bFGF, and IL-1, were associated with abnormal proliferation and transdifferentiation of LECs. The aim of this study was to detect the expression of transforming growth factor-$\alpha$ (TGF-$\alpha$), transforming growth factor-$\beta_1$(TGF-$\beta_1$) and basic fibroblast growth factor (bFGF) in LECs of senile and diabetic cataract. The expressions of these growth factors in lens epithelial cells were determined. The sample for growth factor determination were collected in senile cataract patients without metabolic disorder, especially diabetes mellitus and diabetic cataract patients. The mRNA expression of growth factors was detected by semi-quantitative reverse transcription - polymerase chain reaction (RT-PCR) followed by Southern blot analysis. Statistics were analysed using Wilcoxon rank sum test. Semi-quantitative RT-PCR/southern analysis of RNA obtained from thirty surgical specimens demonstrated that the level of mRNA expression of TGF-$\alpha$, -$\beta_1$ and bFGF was increased in diabetic cataract lens tissues compared with senile cataract specimens but non-significant, bFGF and TGF-$\beta_1$ mRNA expression were detected in most patients, expression level of TGF-$\beta_1$ was most high on the basis of normal ocular concentration. Detection rate of TGF-$\alpha$ in diabetic cataract was 1.5 fold higher than in senile cataract (P=0.098). TGF-$\alpha$, TGF-$\beta_1$, and bFGF mRNA expression of LECs were detected in senile and diabetic cataract. In both patient groups, expression level of TGF-$\beta_1$, mRNA was high, so We suggest TGF-$\beta_1$ strong influence in development of senile cataract and of diabetic cataract also. TGF-$\alpha$ expression level was similar but more frequently detected in diabetic cataract than in senile cataract. In conclusion, TGF-$\alpha$ may be associated with early development of diabetic cataract.

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Superoxide의 세포내 축적과 벼냉해의 발현 (Postchilling Accumulation of Superoxide in Cells and Chilling Injury in Rice Plant)

  • 김종평;현일;정진
    • Applied Biological Chemistry
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    • 제30권4호
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    • pp.364-370
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    • 1987
  • 본연구의 근간이 되는 기본적 가정은, (1) 식물냉해기작에서 2차과정은 반응성이 강한 $O_2^-$의 체내 축적이다. (2) $O_2^-$는 식물체가 저온(低溫)처리를 받고 있는 도중이 아니라 상온(常溫)으로 환원된 뒤에 축적되기 시작한다. (3) $O_2^-$의 축적은 미토콘드리아 막의 상전이가 야기한 세포대사(細胞代謝)$(glycolysis{\rightarrow}TCA\;cycle{\rightarrow}respiratory\;electron\;transport)$의 균형파괴에 기인 한다. 이와 같은 가정을 뒷받침할 수 있는 중요한 연구 결과는 다음과 같다. 먼저 $O_2^-$의 상대적(相對的) 수준(水準)을 측정하는 방법을 확립하였다. 저온처리를 받은 벼 유묘는 처리하지 않은 유묘보다 그 조직 추출액중의 $O_2^-$수준이 높게 나타났다. 48시간의 저온처리중에는 $O_2^-$의 축적이 거의 일어나지 않았으나, 상온(常溫)으로 환원시킨 후 축적되기 시작하여 약 8시간후에 최고치에 도달하였다. Model system을 이용한 연구 결과, 호흡기질을 공급했을 때 미토콘드리아 membrane(SMP)에서 $O_2^-$의 생성이 증가하였다. 효소적으로 발생시킨 $O_2^-$가 존재하는 조건하에서 미토콘드리아막의 전자전달 활성이 저해를 받았다. $O_2^-$의 축적이 최고치에 도달한 후 급격히 감소되는 사실이 관찰되었으며, 이는 Superoxide dismutase(SOD)에 의한 $O_2^-$의 dismutation 결과로 해석되었다.

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생쥐 배아에서 Heparin-Binding Epidermal Growth Factor가 MMP-9과 ATPase ${\gamma}$-subunit 유전자의 발현에 미치는 영향 (Effects of Heparin-Binding Epidermal Growth Factor on the Expression of MMP-9 and ATPase ${\gamma}$-subunit mRNA in the Mouse Embryo)

  • 홍석호;나희영;이지윤;김정희;김정훈;채희동;강병문;김문규
    • Clinical and Experimental Reproductive Medicine
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    • 제28권2호
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    • pp.87-93
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    • 2001
  • Objectives: The purpose of this study was to evaluate effects of heparin-binding epidermal growth factor (HB-EGF) on the rate of blastocyst formation and hatching in the mouse embryos and the expression of matrix metalloproteinase-9 (MMP-9) and ATPase ${\gamma}$-subunit mRNA. Methods: Late 2-cell mouse embryos was cultured for 72 hours in RTF medium containing with 1, 10, and 100 ng/ml HB-EGF. The mRNA expression level of MMP-9 and ATPase ${\gamma}$-subunit was detected by reverse transcription-polymerase chain reaction (RT-PCR). Results: The rate of hatching was significantly higher (p<0.05) in group containing with 1 ng/ml HB-EGF than other groups. Also, the rate of hatched blastocyst was significantly higher (p<0.05) in 10 ng/ml. The mRNA expression level of MMP-9 mRNA was not shown any difference among groups, but ATPase ${\gamma}$-subunit was higher than other groups. Conclusions: Taken together these results suggest that HB-EGF has the positive effect to promote the blastocyst formation and hatching process and influences the blastocoel expansion by promoting the ATPase mRNA expression in the mouse embryos.

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Hexachlorobenzene Dechlorination Ability of Microbes from Canal and Estuary Sediments

  • Anotai, Jin;Voranisarakul, J.;Wantichapichat, W.;Chen, I.M.
    • 한국습지학회지
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    • 제9권1호
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    • pp.107-114
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    • 2007
  • This study aimed to investigate the hexachlorobenzene (HCB) dechlorinating ability of sediment microbes collected from a natural canal receiving secondary effluents from an industrial estate and nearby factories. Nine sites along the stream and one in the estuary in the Gulf of Thailand into which the canal spills were specified and sampling for sediment and water. Preliminary analysis of the sediments showed that the first four sites nearest to the discharging location were contaminated by HCB within the range of 0.18 to 1.25 ppm. Apart from that, 1,3,5-trichlorobenzene which has never been commercially produced or used in any manufacturing processes except for the transformation from higher chlorinated benzene was also identified in the range of 0.16 to 0.24 ppm. This suggested a possibility of sporadically HCB contamination in this stream. Of more important, people in the community along this canal earn their living by coastal fishery; hence, posing a risk of spreading HCB and its less chlorinated congeners via food chain from caught marine creatures to human. As a result, there is an urgent need to understand the behavior of HCB dechlorination in this stream sediment which can lead to a clean-up action in the future. Serum bottles with sediment slurries (sediment to water ratio of 1:1 (v/v) and filtered to remove particles larger than 0.7 mm) from each site were inoculated with 2 mg/l of HCB, kept anaerobically in the dark at room temperature without any nourishment, and analyzed for HCB and its less-chlorinated congeners every 6 days. Total chemical oxygen demand, suspended solids, and volatile suspended solids were in the range of 21,492-73,584, 158,100-518,100 and 6,000-32,700 mg/l, respectively. It was found that all sediment slurries began to dechlorinate HCB in 12 to 30 days and the HCB was completely removed within 42 to 60 days or so. On the other hand, there was no HCB dechlorination occurred in the controlled set which was sterilized by autoclaving prior to the addition of HCB. This implies that the HCB transformation was solely due to microorganisms' activities. HCB was dechlorinated principally via pentachlolobenzene to 1,2,3,5-tetrachlorobenzene and terminated at 1,3,5-trichlorobenzene which is the major pathway as reported by many researchers. Dichlorobenzene has not been detected in any samples within the dechlorination period of 60 days. The results indicate that the microbial matrix in the sediment of this stream has an outstanding capability to dechlorinate HCB. Existing substrates and nutrients which mainly sorbed onto the solid phase and the typical temperature in Thailand were sufficient and suitable to promote the activities of these HCB-dechlorinating microbes.

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연초에서 발생하는 복숭아혹진딧물(Myzus persicae)형태형 2종의 Random Amplified Polymorphic DNA(RAPD)을 이용한 유전적 유연관계 분석 (Genetic Relationahips of the Two Morphorogical Types of Myzus persicae(Homoptera:Aphididae) Collected from Tobacco Plants Based on Random Amplified Polymorphic DNA(RAPD))

  • 채순용;이기원;김상석;장영덕
    • 한국응용곤충학회지
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    • 제37권1호
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    • pp.31-37
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    • 1998
  • 연초에 채집하여 Blackman(1987)의 기주선호성과 형태적인 특징을 이용하여 분류한 방법에 의해 두가지 타입을 (M. persicae Sulzer와 M. nicotianae Blackman)으로 구분된 무시성충 복숭아 혹진딧물 8 클론의 유전적 특성을 분석을 위하여 RAPD-PCR방법을 이용하였다. 사용된 random primer(10-mer) 100개 중에서 20개의 primer을 선발하였는데 GC content가 70, 80, 90%인 primer에서 각각 26.9%, 50.5% 및 66.^%로 GC content가 높아질수록 PCR결과 band의 양상이 좋게 나타났다. simple matching coefficient를 구하여 matrix를 작성해 본 결과 유사계수(similarity coefficient)의 범위는 0.414~0.808사이이었다. 복숭아혹진딧물 clone 간에 유사계수가 가장 높은 것은 PG2와 PG3 클론으로 0.808로 나타났으며, DBR클론을 기준으로 하여 볼 때 PG2 클론간의 유사계수를 0.414로 유사도가 가장 낮았다. 유사계수를 이용하여 8가지 클론의 진딧물들에 대한 유전적 근연관RP를 살펴보면 M. persicae typer에 속하는 PG1, PG2, PG3 클론들과 M. nicotianae type에 속하는 RED 클론이 유사도 0.643에서 한그룹, M. nicotianae type에 속하는 GR1, GR2, BRN크론들이 유사도 0.636에서 유연관계가 있었으며 그리고 M. persicae type에 the하는 DBR클론 등 세 개의 그룹으로 구분되었다. 따라서 연초에서 발생한 복숭아혹진딧물 형태형 2종 (M. persicae와 M. nicotianae)에 대하여 RAPD 기법을 이용하여 분석해본 결과 뚜렷한 유전적 유연관계는 발견하지 못하였다.

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Bis(ethylenediamine) cuprate(II)$\cdot$Dichromate의 합성 및 결정구조 연구 (Synthesis and Structure of Bis(ethylenediamine) cuprate(II)$\cdot$Dichromate)

  • 김승빈;남궁해
    • 한국결정학회지
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    • 제16권1호
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    • pp.38-42
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    • 2005
  • Bis(ethylenediamine) cuprate(II)$\cdot$dichromate $Cu(C_2H_8N_2)_2{\cdot}Cr_2O_7$의 결정구조는 a=5.682(1), b=8.567(2), c=14.839(3) ${\AA},\;{\alpha}=97.50(2),\;{\beta}=101.06(1),\;{\gamma}=109.38(2)^{\circ}$, 삼사정계(Triclinic), 공간군 P-1, 공간군 번호 2이며, Z=2, V=653.9(2) ${\AA}^3,\;D_c=2.030gcm^{-3},\;{\mu}=3.273mm^{-1}$이었다. 구조분석은 중금속법으로 풀었으며, 최소 자승법으로 정밀화하였고, 최종 신뢰도 값들은 2291개의 회절반점에 대하여 $R_1=0.0256,\;R_w=0.0708,\;R_{all}=0.0316,\;S=1.151$이었다. 구리 착이온의 Cu-N의 평균 거리가 2.010(3) $\AA$이고, 면에 거의 수직으로 Cu-O 평균거리가 2.525(2) $\AA$로써 찌그러진 팔면체 구조를 하고 있다. 두 가지 이온들은 [111]-방향을 따라서 사슬구조를 형성하고, 이 축을 포함한 이차원 (0-11)면상에 놓인 인접한 축들 사이에는 N1-O5와 N3-O1 수소결합으로 연결되어 있다.

Response of osteoblast-like cells cultured on zirconia to bone morphogenetic protein-2

  • Han, Seung-Hee;Kim, Kyoung-Hwa;Han, Jung-Seok;Koo, Ki-Tae;Kim, Tae-Il;Seol, Yang-Jo;Lee, Yong-Moo;Ku, Young;Rhyu, In-Chul
    • Journal of Periodontal and Implant Science
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    • 제41권5호
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    • pp.227-233
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    • 2011
  • Purpose: The aim of this study was to compare osteoblast behavior on zirconia and titanium under conditions cultured with bone morphogenetic protein-2. Methods: MC3T3-E1 cells were cultured on sandblasted zirconia and sandblasted/etched titanium discs. At 24 hours after seeding MC3T3-E1, the demineralized bone matrix (DBM) gel alone and the DBM gel with bone morphogenetic protein-2 (BMP-2) were added to the culture medium. The surface topography was examined by confocal laser scanning microscopy. Cellular proliferation was measured at 1, 4, and 7 days after gel loading. Alkaline phosphatase activity was measured at 7 days after gel loading. The mRNA expression of ALPase, bone sialoprotein, type I collagen, runt-related transcription factor 2 (Runx-2), osteocalcin, and osterix were evaluated by real-time polymerase chain reaction at 4 days and 7 days. Results: At 1, 4, and 7 days after loading the DBM gel alone and the DBM gel with BMP-2, cellular proliferation on the zirconia and titanium discs was similar and that of the groups cultured with the DBM gel alone and the DBM gel with BMP-2 was not significantly different, except for titanium with BMP-2 gel. ALPase activity was higher in the cells cultured with BMP-2 than in the other groups, but there was no difference between the zirconia and titanium. In ALPase, bone sialoprotein, osteocalcin, Runx-2 and osterix gene expression, that of cells on zirconia or titanium with BMP-2 gel was much more highly increased than titanium without gel at day 7. The gene expression level of cells cultured on zirconia with BMP-2 was higher than that on titanium with BMP-2 at day 7. Conclusions: The data in this study demonstrate that the osteoblastic cell attachment and proliferation of zirconia were comparable to those of titanium. With the stimulation of BMP-2, zirconia has a more pronounced effect on the proliferation and differentiation of the osteoblastic cells compared with titanium.

DTW를 이용한 SVM 기반 이진트리 구조 설계 (Binary Tree Architecture Design for Support Vector Machine Using Dynamic Time Warping)

  • 강윤정;이재일;배진호;이승우;이종현
    • 전자공학회논문지
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    • 제51권6호
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    • pp.201-208
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    • 2014
  • 본 논문은 DTW 결과를 이용하여 분류기 구조를 설계하는 알고리즘을 제안한다. 제안된 알고리즘은 다수 클래스의 데이터를 분류하기 위한 SVM 기반 이진트리 구조를 설계하는데 있어 DTW 결과를 이용한다. 각 클래스에 대한 데이터를 DTW의 입력으로 하여 얻어진 결과행렬의 열의 합을 이용하여 계산된 임계치를 기준으로 SVM 기반 이진트리 구조(SVM-BTA)를 설계한다. 제안된 알고리즘의 성능 비교를 위해 데이터베이스와 k-means 알고리즘을 이용한 이진트리 구조의 분류 결과를 비교한다. 분류에 사용된 데이터는 수중과도소음 데이터베이스의 18개 클래스 333개의 데이터이다. 제안된 분류기는 데이터베이스의 체계를 이용한 분류기에 비해 분류성능이 향상되었고, k-means 알고리즘을 이용한 분류기에 비해 비 생물소음의 검출 확률이 향상되었다. 제안된 SVM-BTA는 생물 소음(BO) 68.77%, 기계 소음인 체인(CHAN) 92.86%, 그 외의 기계 소음 및 음향학적 소음, 기타소음의 6종은 100%로 분류한다.

The Exposure Status and Biomarkers of Polycyclic Aromatic Hydrocarbons in Shipyard Workers

  • Koh, Sang-Baek;Park, Jun-Ho;Yun, Ju-Song;Lee, Kang-Myoung;Cha, Bong-Suk;Chang, Sei-Jin;Kim, Cheong-Sik;Kim, Heon;Chang, Soung-Hoon
    • Molecular & Cellular Toxicology
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    • 제2권2호
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    • pp.134-140
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    • 2006
  • Because shipyard workers are involved with various manufacturing process in shipyard industry, and they are exposed to many kinds of hazardous materials. Especially, painting workers were exposed polycyclic aromatic hydrocarbons (PAH). This study was conducted to assess the exposure status of PAH based on job-exposure matrix. We investigated the effect of genetic polymorphism of xenobiotic metabolism enzymes involved in PAH metabolism on levels of urinary metabolite. A total of 93 shipbuilding workers were recruited in this study. Questionnaire variables were age, sex, use of personal protective equipment, smoking, drinking, and work duration. The urinary metabolite was collected in the afternoon and corrected by urinary creatinine concentration. The genotypes of CYP1A1, CYP2E1, GSTM1, GSTT1 and UGT1A6 were investigated by using polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) methods with DNA extracted from venous blood. Urinary 1-OHP levels were significantly higher in direct exposured group (spray and touch-up) than indirect exposed group. Urinary 1-OHP, concentration of the high exposure with wild type of UGT1A6 was significantlyhigher than that of the high exposure with other UGT1A6 genotype. In multiple regression analysis of urinary 1-OHP, the regression coefficient of job grade was statistically significant (p<0.05) and UGT1A6 was not significant but a trend (p<0.1). The grade of exposure affected urinary PAH concentration was statistically significant. But genetic polymorphism of xenobiotics metabolism enzymes was not statistically significant. Further investigation of genetic polymorphism with large sample size is needed.

Molecular epidemiological analysis of viscerotropic velogenic Newcastle disease viruses

  • Lee, Youn-Jeong
    • 한국가금학회:학술대회논문집
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    • 한국가금학회 2005년도 제22차 정기총회 및 학술발표회
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    • pp.44-52
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    • 2005
  • 내장친화성 뉴캣슬병 바이러스 한국분리주의 분자역학적 분석 뉴캣슬병 바이러스 한국분리주의 유전자 염기서열과 아미노산 염기서열을 분석한 후 미국, 유럽, 일본, 대만과 중국 등지에서 보고된 뉴캣슬병 바이러스의 유전자와 비교분석을 실시하였다. 1949, 1982-1984, 1988-1997, 1995-2002년도에 분리된 뉴캣슬병 바이러스 한국분리주 들은 각각 유전자형 III, V, VI, VII형에 속하는 것으로 나타났다. 이와 같은 결과는 다섯번의 한국 뉴캣슬병 유행기에 분리된 바이러스의 유전자형이 시대순으로 차례대로 III, V, VI, VII형으로 교체되어 왔음을 의미한다. 계통발생학적 분석 결과, 뉴캣슬병 바이러스 한국분리주중 V유전자형에 속하는 바이러스는 1970년대의 유럽 유행주와 관련성이 있는 반면, 1988년 이후 분리된 VI과 VII 유전자형의 바이러스는 일본, 대만, 중국과 같은 극동아시아의 뉴캣슬병 발생과 관련성이 높은 것으로 나타났다. 따라서 최근에는 극동아시아 유래의 VI과 VII유전자형이 한국분리주의 주류를 이루고 있으며, 이는 극동아시아 국가들간의 축산물과 사람의 교역 및 교류의 증가 때문인 것으로 보인다.

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