• Title/Summary/Keyword: Cell Wall Degradation

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AUTOLYSIS IN THE ANAEROBIC FUNGUS Piromyces communis OTS1 : PRESENCE OF CHITINASE AND β-1, 3-GLUCANASE ACTIVITIES

  • Sakurada, M.;Morgavi, D.P.;Ohishi, T.;Onodera, R.
    • Asian-Australasian Journal of Animal Sciences
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    • v.9 no.3
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    • pp.303-307
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    • 1996
  • The degree of autolysis and presence of cell-wall degrading enzymes in an anaerobic ruminal fungus, Piromyces communis OTSI, grown in liquid medium, was monitored to evaluate the effect of self-digestion on fungal biomass. After a 30 days incubation period fungal dry weight decreased by 45% and the cell wall component chitin decreased by 22%. Chitinase activity detected in the supernatant was mainly of the endotype and peaked at day 6 of the incubation. ${\beta}-1$, 3-glucanase was detected from day 4 and increased throughout the incubation period. Autolysis was a slow process, and under natural conditions it is unlikely that it plays a significant role in the degradation of the spent fungal vegetative stage in the rumen.

Preliminary Studies on the Relationship between Reed and Bacterial Communities in the Salt Marsh Environment of Namyang Bay, Korea

  • Kwon, Kae-Kyoung;Je, Jong-Geel
    • Ocean and Polar Research
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    • v.24 no.1
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    • pp.47-53
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    • 2002
  • To evaluate the effect of reed population on the distribution and activities of microorganisms, vertical distribution of heterotrophic bacteria, degradation rate of cellulose, extracellular aminopeptidase activity (APA) and metabolic diversity based on GN2 Microlog plate were measured at two salt marsh stations in Hogok-ri, Namyang Bay, west coast of Korea. The number of heterotrophic bacteria at station 1 (reed population inhabited area) showed 2 to 6 times higher than that of station 2 (exposed area) with exception in the surface layer. Cellulose degradation rates in station 1 showed more than 50%. month-I and higher than that of station 2 (10.2 to 38.4%. $month^{-1}$). Yet the APA at two stations did not show difference except surface layer and suggested that APA might not be a significant factor in degrading marsh plant debris. Lipid class compounds, cell wall polymers and L-alanine were widely used by microorganisms. The number and activities of bacterial populations especially concerned in plant debris degradation seemed to be stimulated by the reed communities.

Ultrastructural Studies on the Autolysis of Coprinellus congregatus (먹물버섯의 자가분해 과정에 대한 미세구조 연구)

  • Choi Hyung-Tae;Cho Chung-Won
    • Korean Journal of Microbiology
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    • v.41 no.4
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    • pp.312-315
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    • 2005
  • Coprinellus congregatus, known as an inky cap, is autolysed into ink soon after the maturation of the mushrooms. Electron microscopy was used to examine the ultrastructural changes associated with the autolysis as an initial step to understand the role of hydrolytic enzymes in this process. During the early stages of maturation of the mushrooms, most of cytoplasm of hymenial and subhymenial tissues seemed to be transported to the developing basidiospores. The depletion of cytoplasm within the tissues and the maturation of the basidiospores may initiate the degradation of the cell walls of the tissues. Both hymenial and subhymenial tissues seemed to degraded at the same time. This study suggested that the critical steps in the autolysis of mushrooms is not the degradation of the cytoplasm, but the degradation of the cell wall by hydrolytic enzymes such as chitinases.

Production of Brewer's Yeast Extract by Enzymatic Method (효소 분해법에 의한 맥주효모 추출물의 제조)

  • 이시경;박경호;백운화;유주현
    • Microbiology and Biotechnology Letters
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    • v.21 no.3
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    • pp.276-280
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    • 1993
  • Cell lytic enzyme, 5'-phosphodiesterase, and AMP-deaminase were used to produce yeast extract as a natural seasoning from beer yeast cells. Prior to the addition of cell lytic enzyme, heat treatment was performed to increase the cell wall degradation` the optimum condition of the cell lytic enzyme was 50C at pH 7.0. The production yields by the enzymatic method and conventional autolysis method were 42% and 35%, respectively. The total quantity of 5'-nucleotides, GMP and IMP, produced by enzymatic method was increased by 45% than that by the conventional method. Futhermore, the operation time of enzymatic method was only 6.5 hrs, significantly reduced from 24 hrs of the conventional method.

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Softening Related Changes in Cell Wall Polysaccharides of Persimmon (감의 연화와 관련된 세포벽다당류의 변화)

  • Kim, Soon-Dong;Park, Nam-Sook;Kang, Meung-Su
    • Korean Journal of Food Science and Technology
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    • v.18 no.2
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    • pp.158-162
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    • 1986
  • Various cell wall polysaccharides such as ionically associated pectin (IAP), covalently bounded pectin (CBP),4N potassium hydroxide soluble hemicellulosic fraction (HF,) and 0-3N soluble hemicellulosic fraction (HF,) were fractionated from crude cell wall of the fresh and soft persimmon by chemical method. The changesin cell wall polysaccharides were studied by gel filteration chromatography . The content of crude cell wall remarkably decreased in the soft persimmon. The decreasing rates of IAP, CBP and $HF_2$ were 59, 60 and 74%, respectively, while $HF_1$ and cellulose changed only a little during softening. Sugar compositions of IAP and CBP were 72-84% uronic acid, 5-1% hexose and 11-16% pentose, and also the hemicellulose was composed of uronic acid besides hexose and pentose that was hemicellulosic components. The loss rate of pentose in IAP, of hexose in CBP, of hexose and uronic acid in $HF_2$, of pentose in $HF_1$ increased during softening. Though apparent average molecular freight of all polysaccharides shifted from high molecular freight to low molecular weight polymer, the shifting degree of CBP and $HF_2$ was especially remarkable during softening. It is suggested that the severe softening phenomenon of persimmon involved the degradation and dissolution of wall bound-CBP and $HF_2$ which were associated with each other.

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Electron microscopic observations of the irradiation of ultra-violet ray on cryptococcus neoformans (자외선 조사처리에 의한 cryptococcus neoformans의 전자현미경적 관찰)

  • Hwang, Dong-Hoon;Koh, Choon, Myung;Choi, Tae-Joo;Lew, Joon
    • Korean Journal of Microbiology
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    • v.10 no.1
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    • pp.29-34
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    • 1972
  • The present study is of ultra-fine structure of Cryptococcus neoformans by means of electron microscopy and reveals the following : 1) In constrast to the bacteria, the normal Cryptococcus neofrmans contains nuclear enveloped with nuclear menbrane, mitochondria, endoplasmic reticulum, distinct cell wall and cell membrane, vacuoles and storage granules as observed in the eucaryotic cells. 2) In apparent cell walls and cell membrane with the appearance of electron transparent area (ETA) and changes of cell morphology were observed in the ultra-violet ray irradiated cell. 2) In apparent cell walls and cell membrance with the appreance of electron transparent area (ETA) and changes of cell morphology were observed in the ultra-violet ray irradiated cell. 3) Morphology changes and cytoplasmic element abnormality was increased with irradiated time. 4) Increase of electron transparent area was thought to be associated with degradation of cell.

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COMPARATIVE STUDY OF FIBER CHARACTERISTICS OF RICE AND WHEAT STRAWS

  • Zhiliang, T.;Huiping, C.;Tingxian, X.
    • Asian-Australasian Journal of Animal Sciences
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    • v.9 no.1
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    • pp.51-56
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    • 1996
  • In this Experiment three wether male Matou goats (♂), all fitted with permanent rumen fistulae, were used to study the rumen degradabilities (incubation time 48h) of dry matter (DM), neutral detergent fibre (NDF), acid detergent fibre (ADF), acid detergent ligin (ADL), cellulose (CEL) and hemicellulose (HC) and their contents of wheat and rice straws were determined for the different morphological fractions and segments. The results showed that the variation of different fractions for wheat and rice straw is the true resources of their nutritive value variation and the cell wall contents of wheat and rice straw are also obviously different. The rumen degradabilities of different straw fibre are significantly different (p<0.01), mean while the effect of straw variety is also significant (p<0.05). The aim was to set up a foundation for studying the rumen degradation of the roughage resources.

Microbial Forensics: Human Identification

  • Eom, Yong-Bin
    • Biomedical Science Letters
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    • v.24 no.4
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    • pp.292-304
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    • 2018
  • Microbes is becoming increasingly forensic possibility as a consequence of advances in massive parallel sequencing (MPS) and bioinformatics. Human DNA typing is the best identifier, but it is not always possible to extract a full DNA profile namely its degradation and low copy number, and it may have limitations for identical twins. To overcome these unsatisfactory limitations, forensic potential for bacteria found in evidence could be used to differentiate individuals. Prokaryotic cells have a cell wall that better protects the bacterial nucleoid compared to the cell membrane of eukaryotic cells. Humans have an extremely diverse microbiome that may prove useful in determining human identity and may even be possible to link the microbes to the person responsible for them. Microbial composition within the human microbiome varies across individuals. Therefore, MPS of human microbiome could be used to identify biological samples from the different individuals, specifically for twins and other cases where standard DNA typing doses not provide satisfactory results due to degradation of human DNA. Microbial forensics is a new discipline combining forensic science and microbiology, which can not to replace current STR analysis methods used for human identification but to be complementary. Among the fields of microbial forensics, this paper will briefly describe information on the current status of microbiome research such as metagenomic code, salivary microbiome, pubic hair microbiome, microbes as indicators of body fluids, soils microbes as forensic indicator, and review microbial forensics as the feasibility of microbiome-based human identification.