• Title/Summary/Keyword: Carbon sources

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Exploring the Effects of Carbon Sources on the Metabolic Capacity for Shikimic Acid Production in Escherichia coli Using In Silico Metabolic Predictions

  • Ahn, Jung-Oh;Lee, Hong-Weon;Saha, Rajib;Park, Myong-Soo;Jung, Joon-Ki;Lee, Dong-Yup
    • Journal of Microbiology and Biotechnology
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    • v.18 no.11
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    • pp.1773-1784
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    • 2008
  • Effects of various industrially important carbon sources (glucose, sucrose, xylose, gluconate, and glycerol) on shikimic acid (SA) biosynthesis in Escherichia coli were investigated to gain new insight into the metabolic capability for overproducing SA. At the outset, constraints-based flux analysis using the genome-scale in silico model of E. coli was conducted to quantify the theoretical maximum SA yield. The corresponding flux distributions fueled by different carbon sources under investigation were compared with respect to theoretical yield and energy utilization, thereby identifying the indispensable pathways for achieving optimal SA production on each carbon source. Subsequently, a shikimate-kinase-deficient E. coli mutant was developed by blocking the aromatic amino acid pathway, and the production of SA on various carbon sources was experimentally examined during 51 batch culture. As a result, the highest production rate, 1.92 mmol SA/h, was obtained when glucose was utilized as a carbon source, whereas the efficient SA production from glycerol was obtained with the highest yield, 0.21 mol SA formed per mol carbon atom of carbon source consumed. The current strain can be further improved to satisfy the theoretically achievable SA production that was predicted by in silico analysis.

A Useful Material Production from Whey : Effect of Carbon Sources on Zooglan Production by Zoogloea ramigera (유청으로부터 유용물질 생산 : Zoogloea remigera에 의한 Zooglan 생산에서 탄소원의 영향)

  • 김동운;이재찬
    • KSBB Journal
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    • v.10 no.2
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    • pp.221-229
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    • 1995
  • Effects of carbon sources on zooglan production by Zoogloea ramigera were investigated. The production of zooglan was varied according to the carbon sources used. The largest amount of zooglan was obtained when lactose was used as carbon source and fermentation broth with lactose showed the higher viscosity. The effects of carbon sources were in decreasing order of lactose, glucose, galactose and sucrose. The viscosities of purified zooglan solutions (5g/L) obtained from different carbon sources were measured. When lactose was used, the viscosities of zooglan solutions was quite high and other carbon sources such as glucose and galactose gave little lower viscosities than lactose but sucrose gave very low values. On the other hand, it could be postulated that most of lactose is hydrolyzed by intracellular ${\beta}$-galactosidase.

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Roles of Glucose and Acetate as Carbon Sources in L-Histidine Production with Brevibacterium flavum FERM1564 Revealed by Metabolic Flux Analysis

  • Shioya, Suteaki;Shimizu, Hiroshi;Shimizu, Nobuyuki
    • Biotechnology and Bioprocess Engineering:BBE
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    • v.7 no.3
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    • pp.171-177
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    • 2002
  • The metabolic flux pattern for L-histidine production was analyzed when glucose and/or acetate were used as carbon sources. Total L-histidine production was enhanced when mixed substrate (glucose and acetate) was used, compared wish that when either glucose or acetate was used as the sole carbon source. Theoretical maximum carbon fluxes through the main pathways for L-histldine production, cell growth, and ATP consumption for cell maintenance were obtained by the linear programming (LP) method. By comparison of the theoretical maximum carbon fluxes tilth actual ones, it was found that a large amount of glucose was actually used for maintenance of cell viability. On the other hand, acetate was used for cell growth. After depletion of acetate in the mixed substrate culture, the flux for glucose to L-histldine synthesis was markedly enhanced. A strategy for effective L-histidine production using both carbon sources was proposed.

The Schizosaccharomyces pombe Gene Encoding ${gamma}-Glutamyl$ Transpeptidase I Is Regulated by Non-fermentable Carbon Sources and Nitrogen Starvation

  • Kim, Hong-Gyun;Park, Hey-Jung;Kang, Hyun-Jung;Lim, Hye-Won;Kim, Kyung-Hoon;Park, Eun-Hee;Ahn, Ki-Sup;Lim, Chang-Jin
    • Journal of Microbiology
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    • v.43 no.1
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    • pp.44-48
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    • 2005
  • In our previous study, the first structural gene (GGTI) encoding ${\gamma}-glutamyl$ transpeptidase was cloned and characterized from the fission yeast Schizosaccharomyces pombe, and its transcription, using the GGTI-lacZ fusion gene, containing the 1,085 bp upstream region from the translational initiation point, was found to be enhanced by sodium nitroprusside and L-buthionine-(S,R)-sulfoximine (BSO). In the present work, regulation of the GGTI gene was further elucidated. Non-fermentable carbon sources, such as acetate and ethanol, markedly enhanced the synthesis of ${beta}-galactosidase$ from the GGTI-lacZ fusion gene. However, its induction by non-fermentable carbon sources appeared to be independent of the presence of the Pap1 protein. Nitrogen starvation also gave rise to induction of GGTI gene expression in a Pap1-independent manner. The three additional fusion plasmids, carrying 754, 421 and 156 bp regions, were constructed. The sequence responsible for the induction by non-fermentable carbon sources and nitrogen starvation was identified to exist within a -421 bp region of the GGTI gene. Taken together, the S. pombe GGTI gene is regulated by non-fermentable carbon sources and nitrogen starvation.

Graphene growth from polymers

  • Seo, Hong-Kyu;Lee, Tae-Woo
    • Carbon letters
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    • v.14 no.3
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    • pp.145-151
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    • 2013
  • Graphene is a fascinating material with excellent electrical, optical, mechanical, and chemical properties. Remarkable progress has been made in the development of methods for synthesizing large-area, high-quality graphene. Recently, the chemical vapor deposition method has opened up the possibility of using graphene for electronic devices and other applications. This review covers simple and inexpensive methods to grow graphene using polymers as solid carbon sources; which do not require an additional process to transfer graphene from the growth substrate to the receiver substrate.

Enhancement of Biocontrol Activity of Antagonistic Chryseobacterium Strain KJ1R5 by Adding Carbon Sources against Phytophthora capsici

  • Kim, Yu-Seok;Jang, Bo-Ra;Chung, Ill-Min;Sang, Mee-Kyung;Ku, Han-Mo;Kim, Ki-Deok;Chun, Se-Chul
    • The Plant Pathology Journal
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    • v.24 no.2
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    • pp.164-170
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    • 2008
  • Carbon utilization by Chryseobacterium strain KJ1R5 was studied to enhance its biocontrol activity against Phytophthora capsid. Chryseobacterium strain KJ1R5 has previously been shown to control Phytophthora blight of pepper (Capsicum annuum L.). Strain KJ1R5 could utilize carbon sources such as L-arabinose, D-cellobiose, ${\beta}-lactose$ and D-galactose well. P. capsici could utilize D-glucose well, showing the absorbencies ranged from 0.577 to 0.767 at 600nm. When 2% L-arabinose, which could only be utilized by the bio-control strain KJ1R5, was amended into the bacterial suspension, the efficacy of biological control increased. Among the amendments of various carbon sources into bacterial suspension, L-arabinose and D-(+)-glucose significantly enhanced biological control activity, resulting in a reduction of disease incidence to 6.9%, compared to 21.9% for the strain KJ1R5 alone and 81.3% for P. capsici inoculation alone, indicating that amendment with specific carbon sources could increase the biological control activity.

Nitrogen Removal from a mixed Industrial Wastewater using Food-Waste Leachate and Sugar Liquid Waste as External Carbon Sources: Full-Scale Experiment (혼합 산업폐수의 질소제거를 위한 외부 탄소원 투입과 물질수지: 실증실험)

  • Lee, Monghak;Ahn, Johwan;Lee, Junghun;Bae, Wookeun;Shim, Hojae
    • Journal of Korean Society on Water Environment
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    • v.28 no.5
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    • pp.663-668
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    • 2012
  • The feasibility of enhancing biological nutrient removal from an industrial wastewater was tested with food waste leachate and sugar liquid waste as external carbon sources. Long term influences of adding external carbon sources were investigated to see how the biological nutrient removal process worked in terms of the removal efficiency. The addition of the external carbons led to a significant improvement in the removal efficiency of nutrients: from 49% to approximately 76% for nitrogen and from 64% to around 80% for phosphorus. Approximately, 20% of the removal nitrogen was synthesized into biomass, while the remaining 80% was denitrified. Though the addition of external carbon sources improved nutrient removal, it also increased the waste sludge production substantially. The optimal observed BOD/TN ratio, based on nitrogen removal and sludge production, was around 4.0 in this study.

Study on the Basic Information of Carbon Absorption Source in Gangneung Area Considering Green Environment -Centering on geopolitical positions- (녹지환경을 고려한 탄소흡수원의 기초정보에 대하여 -강릉지역의 지정학적 위치를 중심으로-)

  • Li XiangJie;Tae-Dong Cho
    • Journal of Environmental Science International
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    • v.32 no.9
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    • pp.647-657
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    • 2023
  • The study analyzes the forest status of each local government for Korean forests and believes that it can be used as basic data for setting the direction pursued by each local government. The study took into account the fact that the forest rate in Korea was 63.5%, because it was judged that the higher the proportion of forest area, the more important it was to use the characteristics of forests. The characteristics of forests were analyzed based on four factors in 12 factors to identify the location of the ground body by dividing seven types. In addition, basic information on carbon absorption sources was provided by grasping the ability of carbon absorption sources per year through the amount of forest resources to be analyzed. In addition, as a result of analyzing the characteristics of the weather for the promotion of carbon absorption sources, the flat area on the side of Gangneung Mountain was a warm forest with a warm index of 106.0.

Growth and Physiological Responses of Four Plant Species to Different Sources of Particulate Matter

  • Kwon, Kei-Jung;Odsuren, Uuriintuya;Bui, Huong-Thi;Kim, Sang-Yong;Park, Bong-Ju
    • Journal of People, Plants, and Environment
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    • v.24 no.5
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    • pp.461-468
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    • 2021
  • Background and objective: Particulate matter (PM) has a serious impact on health. Recently, studies are conducted to reduce PM in an environmentally friendly way using plants. This study investigated the physiological responses of plants and their ability to remove PM by continuously spraying different PM sources (loam, fly ash, carbon black) to four native plant species, such as Iris sanguinea, Pteris multifida, Vitis coignetiae, and Viburnum odoratissimum var. awabuki. Methods: The four plant species were randomly placed in four chambers, and 0.1 g of different PM was injected into each chamber twice a week. We measured chlorophyll, carotenoid, chlorophyll fluorescence (Fv/Fm), total leaf area, amount of leaf wax, PM10 (sPM10) and PM2.5 (sPM2.5) on the leaf surface, and PM10 (wPM10) and PM2.5 (wPM2.5) on the wax layer. Results: For I. sanguinea and V. coignetiae, the sources of PM did not affect the growth response. P. multifida showed high chlorophyll a, b, total chlorophyll, and carotenoid content in carbon black as well as high Fv/Fm and total leaf area, thereby proving that carbon black helped plant growth. By PM sources, sPM10 showed a significant difference in three plant species, sPM2.5 in two plant species, and wPM10 in one plant species, indicating that sPM10 was most affected by PM sources. Conclusion: Carbon black increased the leaf area by affecting the growth of P. multifida. This plant can be effectively used for PM reduction by increasing the adsorption area. I. sanguinea and V. coignetiae can be used as economical landscaping plants since they can grow regardless of PM sources.

Synthesis lit Alcohol-oxidase in Hansenula polymoypha on Various Carbon Sources (여러가지 탄소원에 의한 Hansenula polymoypha의 Alcohol-oxidase합성)

  • 이명숙;장동석;최위경
    • Microbiology and Biotechnology Letters
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    • v.17 no.5
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    • pp.461-467
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    • 1989
  • The regulation of the synthesis of alcohol-oxidase (E.C.1.1.3.13.) was investigated in the methanol-utilizing yeasts during growth on different carbon sources. For this experiment, Hansenula polymoypha CBS 4132, Hansenula polymoypha CBM 11 and Hansenula polymoypha Cooney were cultured in mineral salt medium by changing its carbon sources. The production of alcohol-oxidase was varied by the carbon sources. For exmaple, alcohol-oxidase was undetectable: in all strains submitted to the test in the medium with glucose, but its production was rapidly increased when the carbon source was changed from glucose to methanol after 30 hrs of incubation. Moreover, this enzyme was not synthesized during growth on the primary aliphatic alcohols alone (ethanol, propanol, butanol or pentanol) or on the mixed substrates (0.5% methanol + 0.5% primary aliphatic alcohols). When cells were grown on the various carbon sources (glucose, xylose, lactose, glycerol, galactose, saccharose, sorbose, lactic acid or acetic acid), the alcohol-oxidase was about one-tenth of the activity found in cells grown on methanol alone. These carbon sources together with methanol yielded far better synthesis of alcohol-oxidase than in case of carbon sources alone. Especially, the alcohol-oxidase activity of the cells grown on lactose or lactic acid together with methanol was far better or similar than that of cells grown on methanol alone. The synthetic activity of alcohol-oxidase of Hansenula polymoypha CBS 4132 was the strongest among the three strains tested in every respect.

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