• Title/Summary/Keyword: COASTAL SPECIES

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A report of 20 unrecorded bacterial species in Korea, isolated from soils of coastal areas in 2022

  • Seung Hyeok Soung;Jaeho Song;Seung Yeol Shin;Song-Ih Han
    • Journal of Species Research
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    • v.12 no.4
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    • pp.267-276
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    • 2023
  • To obtain unrecorded bacterial species in Korea, various soils of coastal areas were collected from the Republic of Korea in 2022. After plating the samples on marine agar and incubating aerobically and anaerobically, approximately 1,700 bacterial strains were isolated and identified using 16S rRNA gene sequences. A total of 20 strains showed ≥98.7% 16S rRNA gene sequence similarity with validly published bacterial species but not reported in Korea, indicating they are unrecorded bacterial species in Korea. The unrecorded bacterial strains belonged to four phyla, six classes, 15 orders, 16 families, and 19 genera which were assigned to Blastomonas and Sphingomonas of the class Alphaproteobacteria; Pseudidiomarina, Kushneria, Salinicola, and Salinisphaera of the class Gammaproteobacteria; Evansella, Virgibacillus, and Paenibacillus of the class Bacilli; Cyclobacterium of the class Cytophagia; Pedobacter of the class Sphingobacteriia; and Demequina, Ornithinimicrobium, Blastococcus, Jatrophihabitans, Kineococcus, Glaciihabitans, Aeromicrobium and Streptomyces of the class Actinomycetes. The details of the 20 unreported species, including Gram reaction, morphology, biochemical characteristics, and phylogenetic position are also provided in the description of the strains.

A report of 20 unrecorded bacterial species isolated from island and coastal ecosystems in 2023

  • Da Som Kim;Seung Yeol Shin;Heeyoung Kang;Jae Ho Song;Song-Ih Han
    • Journal of Species Research
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    • v.13 no.3
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    • pp.310-317
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    • 2024
  • Various samples from island and coastal ecosystems in South Korea were investigated to discover unrecorded bacterial species. Soils from these areas, along with seawater samples, were plated on marine agar and R2A agar (containing 3% sea salt). From these samples, approximately 1,070 bacterial strains were isolated as single colonies and identified using 16S rRNA gene sequences. A total of 20 strains, which exhibited at least 98.7% similarity in their 16S rRNA gene sequences to those of validly published bacterial species not yet reported in Korea, were identified as unrecorded bacterial species. These strains belonged to three phyla, six classes, 10 orders, 14 families, and 16 genera. These were assigned as follows: Thioclava, Breoghania, Acidovorax, Erythrobacter, Paracoccus, Jiella, Aurantimonas, and Qipengyuania within the class Alphaproteobacteria; Pseudomonas, Cobetia, and Rheinheimera within the class Gammaproteobacteria; Aequorivita, Leeuwenhoekiella, and Polaribacter within the class Flavobacteriia; Algoriphagus within the class Cytophagia; and Microbacterium within the class Actinobacteria. The unreported species underwent further taxonomic characterization, which included assessments of Gram reaction, colony and cell morphology, biochemical and phylogenetic characteristics.

Research Trends Regarding Fisheries' Biological Resources in Korean Coastal Areas (우리나라 수산생명자원 연구동향)

  • Oh, Hyun Taik;Youn, Seok-Hyun;Chung, Mi Hee;Lee, Won Chan
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.46 no.1
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    • pp.1-9
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    • 2013
  • Fisheries' biological resources were considered public resources before the 1990s. Every country could access and use these resources without regulation. However, the United Nations adopted the Convention on Biological Diversity and the privileges and rights to these resources were attributed to countries. This research starts with the research background and social and academic value of "The Jasan Eobo (or Report on Marine Organisms in the Coastal Waters near Heuksan Island)" by Jeong Yak-Jeon, who pioneered the new field of Fisheries Science and Marine Biology in Korea in the early 1800s. We also searched for recent results from the Marine Bio-Diversity Research Activities of the Korean National Council for Conservation of Nature (KNCCN) and the Ministry of Maritime Affairs and Fisheries (MOMAF). KNCCN reported that marine bio-diversity comprised approximately 6,500 species in 1996, and the Ministry of Maritime Affairs and Fisheries reported there were about 10,000 species in 2007. Among these marine species, plankton account for about 25%, seaweeds 11%, invertebrates 52%, and vertebrates 12% in Korean Coastal Areas. The Ministry for Food, Agriculture, Forestry, and Fisheries (MIFAFF) enacted a law for Agriculture and Fisheries Resources Management in 2012; this law includes the preservation of marine ecosystems, the conservation of wetlands and the preservation of fisheries resources, and describes the boundary of taxonomy for new species and unknown species that could be identified in the near future. To follow the new regulation for Access to General Resources and Benefit-Sharing, this research suggests (1) the importance of taxonomy for new species and unknown species as a goal of "No Name = No Information", (2) integrated research on bio-diversity, species distributions and the abundance of fisheries resources, both in local areas and in Korean Coastal Areas, and (3) the observance of international regulations or agreements for benefit-sharing without additional damage in the future.

Species composition of the catches collected by trammel net in the coastal waters off Ulleungdo of Korea (울릉도해역에서 삼중자망에 의한 어획물의 종조성)

  • CHUNG, Sangdeok;CHA, Hyung Kee;LEE, Jae Bong;LEE, Hae Won;YANG, Jae Hyeong
    • Journal of the Korean Society of Fisheries and Ocean Technology
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    • v.51 no.4
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    • pp.567-575
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    • 2015
  • Species composition in the coastal waters off Ulleungdo of Korea were examined based on catches bimonthly collected by trammel net in 2013. A total of 711 individuals and 181.9 Kg were caught and catches were composed of 4 classes 15 orders 27 families 52 species including 44 Pisces, 4 Gastropoda, 3 Cephalopoda, and 1 Echinodermata. The dominant species in biomass were File fish (Thamnaconus modestus), Atka mackerel (Pleurogrammus azonus), and Greenling (Hexagrammos otakii). Data were summarized using hierarchical cluster analysis (HCA) and detrended correspondence analysis (DCA) to examine similarity in species composition for each month, and community structure in Ulleungdo was divided into two groups. Community structures in February, April and December with low temperature and well-mixed surface water were distinguished from those in June, August and October with high temperature and strong stratification, which could be attributed to temporal changes in dominant species. Atka mackerel and Spear squid mainly caught in February and April, disappearing in June, August and October, and File fish outburst was shown in October. Because the water off Ulleungdo has been under low human pressure, it could be a good case study to elucidate effects of climate change on community structure and ecosystem in the East sea. Continuous surveys and further studies are required to demonstrate migration route and distribution of dominant species and long-term changes in community structure in the water of Ulleungdo.

Ecosystem-based resource assessment on coastal fisheries of Uljin in East Sea of Korea (한국 동해 울진 연안어업의 생태계 기반 자원평가)

  • Yoon, Sang-Chul;Zhang, Chang-Ik;Seo, Young-Il;Kim, Zang-Geun
    • Journal of the Korean Society of Fisheries and Ocean Technology
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    • v.50 no.4
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    • pp.567-582
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    • 2014
  • Coastal fisheries in Korean waters have highly complexity with a variety of fishing gears, and scale of those fisheries is smaller than that of offshore fisheries. As a result, important spawning and nursery grounds for many species of fish has been destroyed. The pragmatic ecosystem-based approach was developed for the assessment of fisheries resources in Korean waters by Zhang et al. (2009; 2010). As for the species risk index (SRI), common squid caught by coastal gillnet in the Uljin region had the highest risk. As for the fisheries risk index (FRI), coastal gillnet in the Uljin coastal waters had the highest risk. For the common squid which had the highest SRI, resources management strategies must be established such as catch prohibition of length and period with TAC. For the coastal gillnet in the Uljin region which had the highest FRI, it is judged to need management plans for conserving biodiversity as reducing the catch of non-target species and discards. Also to protect existing habitat, illegal fishery should be prohibited, and fishing gears should be designed in the environmental-friendly way considering when fishing gears lost.

A Herbological Study on the Phaeophyta Growing in the Korean Coastal Waters (한국에서 자생하는 갈조식물문에 관한 본초학적 연구)

  • Jeon, Ui Sang;Jeong, Jong-Gil
    • The Korea Journal of Herbology
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    • v.36 no.4
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    • pp.9-22
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    • 2021
  • Objective : The purpose of this dissertation is to make a list of the phaeophyta growing naturally in the Korean coastal waters, and to carry out a survey on the current distribution status to investigate the phaeophyta which can be used as medicinal herbs. Methods : References and research papers about herbology published at home and abroad were examined. Results : The results of this study were as follows : A total of 63 genera and 145 species of phaeophyta was found in the Korean coastal waters among which 11 genera and 15 species(approximately 11%) were medicinal plants. Out of the 145 species of phaeophyta 27 species belonged to Sargassum, and out of the 15 species of medicinal plants 4 species belonged to Sargassum. Among the medicinal parts 11 species belonged to algae. Sixteen species had cold property, and 16 species had salty flavors. Thirteen species had the efficacy of liver meridian, and 15 species had the potency of YEONKYUN, which helps to remove hard clots generated in human body. No toxic drugs were detected. Conclusion : There were totaled to 63 genera and 145 species in Phaeophyta in Korea and among them medicinal plants are 11 genera, 15 species, some 11% in total. Thirteen species had the efficacy of liver meridian, and 15 species had the potency of YEONKYUN, which helps to remove hard clots generated in human body. No toxic drugs were detected.

Seasonal Variations of Fisheries Resources Composition in the Coastal Ecosystem of the Yongil Bay, Korea (한국 영일만에서 수산자원 종조성과 계절변동)

  • Lee, Jae Bong;Shin, Young Jae;Lee, Soo Jeong;Lee, Jong Hee;Choi, Young Min;Lee, Dong Woo;Kim, Sang Woo;Yang, Jae Hyeong
    • Journal of Environmental Science International
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    • v.21 no.10
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    • pp.1275-1286
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    • 2012
  • Coastal marine ecosystem plays important role of spawning and nursery grounds for fisheries resources. Yongil Bay is one of major coastal marine ecosystems, which is located in the southwestern East Sea of Korea. Species composition and abundance of marine organism in the Yongil Bay were investigated by season from March to November 2009. Gill net and pot fisheries were used for survey of pelagic and demersal species composition, and collected 106 species, 67 families, and 7 taxa of fisheries resources from the coastal ecosystem. Species were included 2 species in Ascidiacea, 2 species in Bivalvia, 6 in Cephalopoda, 22 in Crustacea, 5 in Echinodermata, 12 in Gastropoda, and 57 in Pisces. Diversity indices (Shannon index, H') showed seasonal variation with low value of 2.11 in winter, and high value of 2.63 in autumn. Main dominant species were Asterias amurensis, Pleuronectes yokohamae, Siphonalia spadicea fuscolineata, Trachurus japonicas, Sillago japonica, Conger myriaster, Volutharpa ampullaceal, Engraulis japonicus, Asterina pectinifera, and Portunus (Portunus) sanguinolentus that were occupied over 71.5% of total individuals, and 52.9% of wet weight. Seasonal variations of fisheries resources composition were discussed on correlationships with those of environmental factors in the coastal ecosystem of the Yongil Bay in Korea. Those results from this study will provide scientific data and information to develop the ecosystem-based coastal fisheries assessment and management system in Korea.

Considerations and Alternative Approaches to the Estimation of Local Abundance of Legally Protected Species, the Fiddler Crab, Austruca lactea (법정보호종, 흰발농게(Austruca lactea) 서식 개체수 추정에 대한 검토와 대안)

  • Yoo, Jae-Won;Kim, Chang-Soo;Park, Mi-Ra;Jeong, Su-Young;Lee, Chae-Lin;Kim, Sungtae;Ahn, Dong-Sik;Lee, Chang-Gun;Han, Donguk;Back, Yonghae;Park, Young Cheol
    • Journal of Wetlands Research
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    • v.23 no.2
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    • pp.122-132
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    • 2021
  • We reviewed the methods employed in Korean tidal flat surveys to measure the local abundance of the endangered wildlife and marine protected species, the fiddler crab, Austruca lactea. A complete census for infinite population is impossible even in a limited habitat within a tidal flat, and density estimates from samples strongly vary due to diverse biological and ecological factors. The habitat boundaries and areas shift with periodicities or rhythmic activities of organisms as well as measurement errors. Hence the local abundance calculated from density and habitat areas should be regarded as transient. This conjecture was valid based on the spatio-temporal variations of the density averages, standard error ranges, and spatial distribution of the crab, A. lactea observed for 3 years (2015-2017) in Songdo tidal flat in Incheon. We proposed the potential habitat areas using the occurrence probability of 50% from logistic regression model, reflecting the importance of habitat conservation value as an alternative to local abundance. The spatial shape of potential habitat predicted from a generalized model would remain constant over time unless the species' critical environmental conditions change rapidly. The species-specific model is expected to be used for the introduction of desired species in future habitat restoration/creation projects.

Species Composition of Fish Collected by a Two-side Fyke Net in the Coastal Water off Taean in 2008 (이각망에 채집된 2008년 태안 연안 어류 종조성)

  • Hwang, Hak-Bin;Lee, Tae-Won
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.44 no.2
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    • pp.173-178
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    • 2011
  • The species and size compositions of fishes in the coastal waters off Taean were determined using samples collected with a two-sided fyke net in 2008. A total of 22 species, 2,371 individuals and 1,351 kg of fish were collected during the study. Of the fish collected, semi-benthic fishes such as Sebastes schlegelii, Mugil cephalus and Chelon haematocheilus were the most abundant (77.5% and 76.4% for total number of individuals and biomass, respectively). Benthic fishes such as Pleuronectus yokohamae and Paralichthys olivaceus were collected in almost all seasons but were low in abundance (5.3% and 4.1% for total number of individuals and biomass, respectively). Seasonal migrants were plentiful; specifically, Seriola quinqueradiata was abundant in November while Konosirus punctaus was common in July. Seasonal migrants of small-sized fish have been known to be abundant in the coastal water of western Korea including the study area, but few fish less than 100 mm were collected due to the large mesh size (30 mm) of the net used.

Population Variation of Spanish Mackerel (Scomberomorus niphonius) according to Its Major Prey Abundance in Southern and Eastern Coastal Waters of Korea (한국 남해와 동해 연안역 주요 먹이 어종의 풍도변화에 따른 삼치 개체군의 변동)

  • Kim, Jin Yeong;Kim, Youngsoon;Kim, Heeyong
    • Journal of Environmental Science International
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    • v.30 no.10
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    • pp.811-820
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    • 2021
  • The population variation of Spanish mackerel (Scomberomorus niphonius) according to its major prey abundance was analyzed using monthly catches of coastal set net fisheries in the southern waters off Gyeongsangnam-do and eastern waters off Gyeongsangbuk-do of Korea from 2006 to 2019. The abundance of Spanish mackerel and its prey species fluctuated almost simultaneously with time lags of +2 to -2 months between the set net fisheries in the southern and eastern waters. The generalized additive model revealed that the abundance of Spanish mackerel was influenced by its prey species such as hairtail and anchovy in southern waters, and common mackerel and horse mackerel in eastern waters. The model deviance explained 49% and 42% of Spanish mackerel abundance in southern and eastern waters respectively. These results suggest that the abundance of Spanish mackerel is affected by seasonal migratory prey fish species in the coastal areas and can be linked to their northerly migration.