• 제목/요약/키워드: Breeding Program

검색결과 422건 처리시간 0.028초

Prediction of Rice Embryo Proteins using EST-Databases

  • Woo, Sun-Hee;Cho, Seung-Woo;Kim, Tae-Seon;Chung, Keun-Yook;Cho, Yong-Gu;Kim, Hong-Sig;Song, Beom-Heon;Lee, Chul-Won;Jong, Seung-Keun
    • 한국육종학회지
    • /
    • 제40권1호
    • /
    • pp.1-7
    • /
    • 2008
  • An attempt was made to link rice embryo proteins to DNA sequences and to understand their functions. One hundred of the 700 spots detected on the embryo 2-DE gels were microsequenced. Of these, 28% of the embryo proteins were matched to DNA sequences with known functions, but 72% of the proteins were unknown in functions as previously reported (Woo et al. 2002). In addition, twenty-four protein spots with 100% of homology and nine with over 80% were matched to ESTs (expressed sequence tags) after expanding the amino acid sequences of the protein spots by Database searches using the available rice EST databases at the NCBI (http://www/ncbi.nlm.nih.gov/) and DDBJ (http://www.ddbj.nig.ac.jp/). The chromosomal location of some proteins were also obtained from the rice genetic map provided by Japanese Rice Genome Research Program (http://rgp.dna.affrc.go.jp). The DNA sequence databases including EST have been reported for rice (Oryza sativa L.) now provides whole or partial gene sequence, and recent advances in protein characterization allow the linking proteins to DNA sequences in the functional analysis. This work shows that proteome analysis could be a useful tool strategy to link sequence information and to functional genomics.

Factors affecting the estimation of antler production in elk deer (Cervus canadensis)

  • Jeon, Dayeon;Lee, Sang-Hoon;Lee, Jinwook;Lee, Yong-Jae;Lee, Sung-Soo;Roh, Hee-Jong;Kim, Dong-Kyo;Dang, Chang-gwon;Kim, Sang-Woo;Kim, Kwan-Woo
    • 농업과학연구
    • /
    • 제46권3호
    • /
    • pp.497-506
    • /
    • 2019
  • The aim of this study was to estimate the factors that can be used as a predictive indicator of antler productivity in elk. Body weight and antler data from 115 stags raised at the Animal Genetic Resources Research Center in Korea were used in this study. The function for the average antler weight was derived by age, which was $y=-3.4693+5.3747x-0.8x^2+0.0424x^3$, and $R^2$ was 0.991. The analysis of the relationship between body weight at birth and the 1st and 2nd year and the antler weight after the 2nd year showed a correlation between them. There was a correlation between the antler weight of 1 and 2 year old stags and the weight of 2 year old stags as well; especially, both antler weights for the 1st and 2nd year were highly correlated with the antler weight of the 4th year. However, there was no relationship between the antler main beam length for the 1st and 2nd year and the antler weight after the 3rd year. Therefore, it is expected that a large amount of antler will be obtained in the future if proper management is carried out for young deer from birth to 2 years old. Additionally, the results of this study are expected to be useful for the development of a deer breeding program and the deer industry.

당근 EST 염기서열을 이용한 종자모 형질 관련 SNP 분자표지 개발 (Development of SNP Molecular Markers Related to Seed-hair Characteristic Based on EST Sequences in Carrot)

  • 오규동;심은조;전상진;박영두
    • 원예과학기술지
    • /
    • 제31권1호
    • /
    • pp.80-88
    • /
    • 2013
  • 당근(Daucus carota L. var. sativa)은 세계적으로 광범위하게 사용되는 채소 작물 중 하나로 비타민 A 카로티노이드의 전구체로 잘 알려진 베타카로틴이 다량 함유되어 있어 영양학적으로도 중요한 작물이다. 하지만 당근 종자는 종피의 epidermal 세포에서 연장되는 형태로 생성되는 종자모의 캐로톨 등과 같은 다양한 요인들에 의해 종자의 수분흡수와 발아가 억제된다. 따라서 당근 종자를 상품화하기 이전에 기계적인 종자모 제거과정을 거쳐야 하며 이러한 과정 때문에 생산자는 종자의 물리적인 손실은 물론 시간과 노동력, 그리고 자본금과 같은 추가적인 손실을 감수해야만 한다. 그리고 종자의 물리적인 손실은 종자발아율을 불균일하게 한다. 이러한 문제점들을 보완하기 위해서 무모종자 당근품종 개발을 위한 육종이 필요하게 되었으며 이러한 육종과정을 위해 종자모 형질관련 분자표지에 관한 연구가 필요하게 되었다. 이에 따라, 본 연구에서는 단모종자 표현형 CT-SMR 616 OP 659-1 개체와 유모종자 표현형 CT-SMR 616 OP 677-14 개체, 그리고 단모종자 표현형 CT-ATR 615 OP 666-13 개체와 유모종자 표현형 CT-ATR 615 OP 671-9 개체의 cDNA library를 각각 작성하였다. 또한 각각의 개체별로 1,248개의 EST, 합계 4,992개의 EST를 sequencing하였다. 단모종자와 유모종자 개체의 EST sequence들을 2개의 조합에서 각각 비교 분석하여 19개의 SNP site, 14개의 SNP site를 확인하였으며 이를 바탕으로 SNP site에 대한 High Resolution Melting 분석을 위한 프라이머를 작성하였다. 작성된 HRM 프라이머들은 유모종자 표현형 CT-SMR 616 OP 1040 개체군과 무모종자 표현형 CT-SMR 616 OP 1024, 1025, 1026 개체군을 이용하여 확인하였다. 그 중 한세트의 HRM 프라이머에서 유모 및 단모종자 표현형 개체군들의 melting curve간 특이적 다형성을 확인하였다. 이러한 결과를 바탕으로 유모종자 당근 및 단모종자 당근간의 보다 간편한 선발을 위해 allele-specific PCR 프라이머를 작성하였다. 이러한 HRM 및 AS-PCR 결과는 무모종자 당근육종에 있어 유용한 분자표지로써 사용될 수 있을 것이라 기대된다.

수정란이식에 있어서 수란우의 준비와 관리 (Preparation and Management of Recipients in Bovine Embryo Transfer)

  • 김창근
    • 한국수정란이식학회지
    • /
    • 제1권1호
    • /
    • pp.35-49
    • /
    • 1986
  • Recipients are an integral part of embryo transfer and they are expensive to maintain as a good recipient. Recipient management is one of the most important components in a successful embryo transfer program. Management includes selection and subsequent care of the animals. A good recipient is basically on "open" cows or heffers whose reproductive tract is capable of receiving one or two embryos and incubating it to term. Potential recipients should be always be healthy and cycling normally ranging from 18 to 23 days. A thorough veterinary examination is recommended for candidate of recipients and cattle for questionable health should be eliminated from the recipient herd. Age and size of recipients are particularly important considerations when heifers are used, because of most embryos available for transfer are from large dams and sires. Body condition can influence a recipient's production, reproduction and health. Obese and underconditioned cattle should be avoided for use. Transfer of fresh embryos especially requires precise synchronization of donors and recipients. For estrus synchronization, PGF$_2$$\alpha$ is injected twice 10 to 12 days apart and short4erm progestagen treatment is applied to potential recipient cattle by coil into vagina (PRID) or ear implant (Synchro-Mate-B). The highest pregnancy results are achieved in recipients at exact synchrony with donors or 12 to 24 hr earlier than donors. Estrus detection is a major factor in breeding efficiency. High accuracy can be achieved by use of heat mount detection alds or by obserbing cattle for 30-minute peroids 3 times daily. Assay progesterone in milk can be used to discrIminate between pregnant and nonprenant recipients. Rectal palpation on day 35 to 70 after is an accurate and safe method of pregnancy diagnosis. Embryonic mortality in recipients may be associated with factors such as high environmental temperature and nutritional or lactational stress in early lactation period. Achievement of short calving interval requires concentrated management activity during the first 90 days following calving. Acceptable candidate for a recipient should be routinely vaccinated for infectious diseases. Proper nutritional programs according to NRC requirements and body condition scoring system for recipient cattles are vital to the ultimate success of an embryo transfer program.r program.

  • PDF

가금티푸스의 특성 및 근절방안에 관한 연구 (The study on the characteristics of fowl typhoid and the eradication program)

  • 강신석;박재명;이종진;육민정;변철섭;서황원;최해연
    • 한국동물위생학회지
    • /
    • 제26권2호
    • /
    • pp.135-144
    • /
    • 2003
  • Fowl typhoid is a septicemic disease of turkeys and chickens. The antigen is Salmonella(S) gallinarum, which cross-reacts with S pullorum because of common antigen. The organism is maintained in the ovary of carrier birds and transmitted vertically in the york. It is also transmitted horizontally through feces and broken eggs. The symptoms are weakness, drowsiness, wing drooping, hyperexcitability, paresis and diarrhea. In the many cases, the birds are found dead in the morning before any symptoms have been noticed. this experiment was carried out to investigate the characteristics of S gallanarum and scrutinized about the control systems. 1. Fowl typhoid was came about in the winter than the other seasons. The average of mortality was 46.3%. And it was came about not only adult poultry but also chicks. 2. S gallinarum was isolated from liver and spleen in infected chickens. Total isolated strains were 60. 3. The organisms were all extinct at 60$^{\circ}C$, 30mins. 4. A survival rate was higher in underground water than a secondary distilled water. It was detected in underground water until 30 days. 5. When being exposed to the solar light, it became extinct almost within 24 hours. 6. It was survived in a refrigerator until 12 months. 7. It was extinct among 5 mins in 0.1% phenol and 2% formalin. 8. When the cultured organism fluid was inoculated in SD-rat abdominal cavity, rat died within 24 hours. 9. Pullorum-typhoid related program must disciplines in order to destroy the fowl typhoid, and breeding system must be converted to cage system.

원격무선추적을 통한 한국너구리(Nyctereutes procyonoides koreensis)의 행동권 연구 (A radio-tracking study of home-range of the Korean raccoon dog(Nyctereutes procyonoides koreensis))

  • Kim, Baek-Jun;Choi, Tae-Young;Park, Chong-Hwa;Kim, Young-Jun;Lee, Hang
    • 한국환경생태학회:학술대회논문집
    • /
    • 한국환경생태학회 2007년도 정기총회 및 학술논문발표회
    • /
    • pp.136-142
    • /
    • 2007
  • The main aim of this study is to estimate home-range of the Korean raccoon dog(Nyctereutes procyonoides koreensis) at a rural area of Gurye in the southern part of South Korea. A radio-tracking was regularly carried out on 4 raccoon dogs for 2 days every 2 months in 2006. During the days, the radio-tracking was usually conducted every 1-3 hours through day-time to night-time. Among the 4 raccoon dogs, 2 individuals(a permanent breeding pair) could be extensively tracked for 5 to 7 months, including all 4 seasons. The result showed that total home-range sizes of the pair were 0.732 $km^2$ and 0.373 $km^2$ for 100% minimum convex polygons(MCP) and 100% kernel(K), respectively, during the monitoring period. Mean home-range sizes of the 2 raccoon dogs were 0.035-0,688 $km^2$ and 0.012-0.341 $km^2$ for MCP and K, respectively. Yearly home-range sizes of the male and female were similar to each other. However, home-range sizes of the raccoon dogs between day-time and night-time were quite different. Furthermore, the raccoon dogs showed a much broader home-range size in spring, summer and fall than in winter season. Finally, the pair had a broad overlapping home-range(about 70-95%), and 1 core area and 4 different feeding areas.

  • PDF

한국의 북극 생물다양성 국제협력사업 참여 전략 (Korea's Strategy for Participating in Arctic Biodiversity International Cooperation Projects)

  • 강성룡;윤지현;장인영
    • 생태와환경
    • /
    • 제55권4호
    • /
    • pp.390-397
    • /
    • 2022
  • 북극 이사회 산하 "북극동식물보전 워킹그룹"은 북극 생물다양성을 보전하고 생물자원의 지속가능성을 보장하기 위해 모니터링, 평가, 정책, 전문가 그룹 활동을 수행하고 그 결과를 정부들과 북극원주민들에게 전달한다. 북극 동식물보전 워킹그룹의 주요업무는 모니터링, 평가, 전략 사업으로 구성되어 있다. 주요 모니터링 사업은 "환북극 생물다양성 모니터링 (해양, 담수, 육상, 연안) 프로그램", 평가 사업은 "북극생물다양성평가", 전략 사업은 "북극철 새이니셔티브"이다. 우리나라는 2013년 북극 이사회 옵서버 국가 지위 획득 후 2015년부터 북극철새이니셔티브 사업에 직접 참여하고 있다. 북극철새이니셔티브는 북극에서 번식하는 철새들이 이용하는 전 세계 이동경로 상의 서식지를 보전하고 불법 사냥을 방지하는 것이 목적이다. 따라서, 철새 이동경로상의 옵서버 국가들이 직접적으로 사업에 참여하고 있다. 우리나라는 2030년까지 북극협력사업 참여를 위한 우선순위 선정 시 기존에 참여하고 있는 북극 철새이니셔티브와 국내 공공기관들이 운영 중인 북극 관련 아카데미 프로그램을 활용해 "CAFF 청년 프로그램" 참여 방안을 고려할 필요가 있다.

High Resolution Melting Analysis을 이용한 고추 유전자원의 Cucumber mosaic virus 저항성 평가 (Evaluation of Resistance in Pepper Germplasm to Cucumber mosaic virus by High Resolution Melting Analysis)

  • 노나영;허온숙;고호철;김상규;이주희;곽재균;권진경;강병철
    • 식물병연구
    • /
    • 제18권4호
    • /
    • pp.290-297
    • /
    • 2012
  • 농업유전자원센터에 보존하고 있는 고추 유전자원 1,941점을 240H02sp6 SNP 마커를 이용하여 Cucumber mosaic virus 저항성 정도를 평가하였다. 1941점의 고추 유전자원에서 89점이 저항성, 162점이 이형접합성, 1270점이 이병성으로 분석되었다. 고추 종별로는 C. annuum은 총 839자원 중 38점이 저항성으로 나타났으며, C. baccatum은 277점 중 23%에 해당하는 자원만 분석이 되었고 분석된 자원 중 20점이 저항성을 나타났다. C. chinense는 21점이 저항성, C. frutescens는 8점이 저항성을 보였다. C. pubescens는 K157779 자원만 이병성을 나타내었으며, Capsicum sp. 자원들 중에는 저항성 자원이 없었다. 야생근연종인 C. chacoense는 15점이 분석되어 1점이 저항성, 4점이 이형접합성, 6점이 이병성을 보였고, C. galapagoense, C. tovarii는 각 한 점씩 분석되었고 모두 이병성으로 나타났다.

Association of SNP Haplotypes at the Myostatin Gene with Muscular Hypertrophy in Sheep

  • Gan, S.Q.;Du, Z.;Liu, S.R.;Yang, Y.L.;Shen, M.;Wang, X.H.;Yin, J.L.;Hu, X.X.;Fei, J.;Fan, J.J.;Wang, J.H.;He, Q.H.;Zhang, Y.S.;Li, N.
    • Asian-Australasian Journal of Animal Sciences
    • /
    • 제21권7호
    • /
    • pp.928-935
    • /
    • 2008
  • The myostatin gene of seven important meat (Beltex (Australia), Beltex$\times$Huyang (F1), Meat and Multi-Prolific Chinese Merino Fine Wool, Meat Chinese Merino Fine Wool and Dorper (South Africa)) and non-meat (Huyang and Kazak) sheep breeds was analyzed to study the genetic basis of muscular hypertrophy (double muscling) phenotype in sheep. SNPs, four in regulatory regions and several in the introns in the myostatin gene, were identified, and the former four SNPs were used for further studies. Twelve haplotypes were predicted by PHASE program, of which four main haplotypes (1, 3, 7, 9) were present in 90% of the 364 sheep in the study. Haplotypes 1-4 were mainly present in meat breeds while haplotypes 7 and 9 dominated the non-meat breeds. The association between haplotypes and average daily gain (ADG) was analyzed among 116 sheep with production data, Haplo2 (CGAA) and Haplo8 (TGAA) were identified to have significant (p<0.05) effect on ADG by the model (JMP5.1 software) taking into account the effects of breed, family background, haplotype, birth weight and sex. ADG of these haplotype groups also correlated well (r = 0.82) with hypertrophic phenotype scores. In conclusion, the mutations -956 (T$\rightarrow$C), -41 (C$\rightarrow$A) and 6223 (G$\rightarrow$A) involved in Haplo2 and 8 may be associated with the double-muscling trait by influencing myostatin function and be suitable markers in selecting meat sheep.

Genetic Parameters of Reproductive and Meat Quality Traits in Korean Berkshire Pigs

  • Lee, Joon-Ho;Song, Ki-Duk;Lee, Hak-Kyo;Cho, Kwang-Hyun;Park, Hwa-Chun;Park, Kyung-Do
    • Asian-Australasian Journal of Animal Sciences
    • /
    • 제28권10호
    • /
    • pp.1388-1393
    • /
    • 2015
  • Genetic parameters of Berkshire pigs for reproduction, carcass and meat quality traits were estimated using the records from a breeding farm in Korea. For reproduction traits, 2,457 records of the total number of piglets born (TNB) and the number of piglets born alive (NBA) from 781 sows and 53 sires were used. For two carcass traits which are carcass weight (CW) and backfat thickness (BF) and for 10 meat quality traits which are pH value after 45 minutes (pH45m), pH value after 24 hours (pH24h), lightness in meat color (LMC), redness in meat color (RMC), yellowness in meat color (YMC), moisture holding capacity (MHC), drip loss (DL), cooking loss (CL), fat content (FC), and shear force value (SH), 1,942 pig records were used to estimate genetic parameters. The genetic parameters for each trait were estimated using VCE program with animal model. Heritability estimates for reproduction traits TNB and NBA were 0.07 and 0.06, respectively, for carcass traits CW and BF were 0.37 and 0.57, respectively and for meat traits pH45m, pH24h, LMC, RMC, YMC, MHC, DL, CL, FC, and SH were 0.48, 0.15, 0.19, 0.36, 0.28, 0.21, 0.33, 0.45, 0.43, and 0.39, respectively. The estimate for genetic correlation coefficient between CW and BF was 0.27. The Genetic correlation between pH24h and meat color traits were in the range of -0.51 to -0.33 and between pH24h and DL and SH were -0.41 and -0.32, respectively. The estimates for genetic correlation coefficients between reproductive and meat quality traits were very low or zero. However, the estimates for genetic correlation coefficients between reproductive traits and drip and cooking loss were in the range of 0.12 to 0.17 and -0.14 to -0.12, respectively. As the estimated heritability of meat quality traits showed medium to high heritability, these traits may be applicable for the genetic improvement by continuous measurement. However, since some of the meat quality traits showed negative genetic correlations with carcass traits, an appropriate breeding scheme is required that carefully considers the complexity of genetic parameters and applicability of data.