• 제목/요약/키워드: Biological Kinetics

검색결과 224건 처리시간 0.028초

이상계내에서 리파제의 반응동력학 (Kinetics of Lipase Reactions in Two Phase System)

  • 권대영;이준식
    • 한국미생물·생명공학회지
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    • 제15권2호
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    • pp.98-103
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    • 1987
  • 이상계를 이용해서 올리브유를 가수분해하는 데 있어서, 리파제의 반응동력학을 검토했다. 반응계는 Candide rugosa와 Rhizopus arrhizus 리파제를 수용액상에 녹이고 기질인 올리브유를 유기용매인 이소-옥탄에 녹여서 서로의 계면에서 효소반응이 일어나는 이상계 반응이다. 각각의 리파제에 대해서 이소-옥탄에 올리브유를 여러 농도로 녹여서 유지 분해속도를 측정함으로써 리파제의 반응 동역학을 보았다. 이상계 내에서 반응 속도 방정식은 일반 효소의 속도 방정식의 Michaelis-Menten식을 따르지 않았다. 이 결과는 이상계에서 유기용매내의 올리브유의 농도가 계면면적의 변화에 영향을 주기 때문에 비롯되는 것으로 생각된다. 그래서 올리브유의 농도가 계면면적에 영향을 주지 않는다고 가정한 식에 변형을 가해서 새로운 식을 유도했다. 이 식은 특히 올리브유가 낮은 농도에서 심하게 Michaelis-Menten 식에서 벗어나는 현상을 설명할 수 있다.

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Amyloid Polymorphism of α-Synuclein Induced by Active Firefly Luciferase

  • Yang, Jee Eun;Hong, Je Won;Kim, Jehoon;Paik, Seung R.
    • Bulletin of the Korean Chemical Society
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    • 제35권2호
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    • pp.425-430
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    • 2014
  • Amyloidogenic proteins often exhibit fibrillar polymorphism through alternative assembly processes, which has been considered to have possible pathological implications. Here, firefly luciferase (LUC) is shown to induce amyloid polymorphism of ${\alpha}$-synuclein, the major constituent of Lewy bodies found in Parkinson's disease, by acting as a novel template. The drastically accelerated fibrillation kinetics of ${\alpha}$-synuclein with LUC required the nucleation center produced by the active enzyme of LUC. Fluorescent dye binding, transmission electron microscopy, and Fourier transformed infrared spectroscopy revealed the morphologically distinctive amyloid fibrils of ${\alpha}$-synuclein prepared in the absence or presence of LUC. As the altered morphological characteristics became inherent to the mature fibrils, those properties were inherited to next-generations via nucleation-dependent fibrillation process. The seed control, therefore, would be an effective means to modify amyloid fibrils with different biochemical characteristics. In addition, the LUC-directed amyloid fibrillar polymorphism also suggests that other cellular biomolecules including enzymes in general are able to diversify amyloid fibrils, which could be self-propagated with diversified biological activities, if any, inside cells.

팔당호 식물플랑크톤의 제한영양염과 성장률의 경시적 변화 (Temporal Changes of Limiting Nutrients and Phytoplankton Growth Rate in Lake Paldang)

  • 최광현;김호섭;한명수;황순진
    • 생태와환경
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    • 제36권2호통권103호
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    • pp.139-149
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    • 2003
  • 팔당호 식물플랑크톤의 제한영양염과 생리학적 성장 특성을 평가하기 위하여 2002년 3월부터 10일까지 팔당호의 수질환경 조사와 함께 실내 배양실험을 실시하였다. 총인의 농도와 Chl. a의 상관성 분석결과, 팔당호의 호수생산성은 인의 영향을 많이 받으며 TN/TP ratio와 식물플랑크톤의 성장잠재력 실험을 통해서도 제한영양염은 인으로 평가되었다. 특히, 봄철이 다른 계절에 비해 상대적으로 용존무기인이 낮은 농도로 존재하기 때문에 높은 인 제한을 받는 것으로 나타났다. 그러나 인의 제한정도는 계절적인 변이를 나타내었으며, 시기에 따라 질소와 규소에 의한 제한가능성도 나타났다. 팔당호 식물플랑크톤 군집의 최대성장률(${\mu}_{max}$)은 0.8${\sim}$l.1$day^1$의 범위로 나타났으며, 반포화농도($K_u$)는 0.1${\sim}$O.8${\mu}M$로 5월에 $0.8{\mu}M$로 가장 높고 9월에 $0.1{\mu}M$로 가장 낮은 것으로 조사되었다. 이는 영양염 흡수에 영향을 미치는 인의 cell quota와 관련이 있는 것으로 나타났으며, 5월에 $0.13{\mu}gP/{\mu}gChl.$ 3로 낮은 값을 나타냈다. 식물플랑크톤의 성장특성 분석을 통해 팔당호에서는 봄에 비해 여름과 가을철에 발생한 식물플랑크톤의 성장이 경쟁적으로 빠르게 발달할 수 있는 잠재성이 있는 것으로 판단된다. 결과적으로, 팔당호 식물플랑크톤 성장은 주로 인에 의하여 제한되며 여름 몬순 이후 수체의 안정기동안 높은 성장을 할 수 있는 생리적 특성을 가지고 있는 것으로 추정된다.

Hydrogen Peroxide, Its Measurement and Effect During Enzymatic Decoloring of Congo Red

  • Woo, Sung-Whan;Cho, Jeung-Suk;Hur, Byung-Ki;Shin, Dong-Hoon;Ryu, Keun-Gap;Kim, Eun-Ki
    • Journal of Microbiology and Biotechnology
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    • 제13권5호
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    • pp.773-777
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    • 2003
  • The color of Congo red hinders the spectrometric measurements of a concentration of hydrogen peroxide and enzyme activity (Horseradish peroxidase; HRP) during enzymatic decoloring of Congo red. In this study, a method was developed to measure peroxidase activity and hydrogen peroxide concentration in the presence of Congo red. The oxidation product of HRP/hydrogen peroxide and ABTS(2,2'-azino-bis-(3-ethylbenzotriazoline-6-sulfonic acid)) formed a dark green color. The spectrum of this product showed absorption bands at 420 nm and 734 nm. When compared with the Congo red spectrum, the absorption at 734 nm of this product did not overlap with Congo red, thus making the hydrogen peroxide measurement possible even in the presence of Congo red. Kinetic study of decoloring of Congo red performed by this method showed that the decoloring reaction followed the Michaelis-Menten kinetics. Pulse feeding of hydrogen peroxide, upon depletion, significantly increased the decoloring of Congo red. This result shows that this newly developed technique can monitor, predict, and improve the enzymatic decoloring process.

Influence of Amorphous Polymer Nanoparticles on the Crystallization Behavior of Poly(vinyl alcohol) Nanocomposites

  • Lee, Kyung-Jin;Lee, Ji-Hye;Hong, Jin-Yong;Jang, Jyong-Sik
    • Macromolecular Research
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    • 제17권7호
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    • pp.476-482
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    • 2009
  • The crystallization behavior of poly(vinyl alcohol) (PVA) in the presence and absence of polypyrrole nanoparticles (PPy NPs) was investigated in terms of the heterogeneous nucleation effect of PPy NPs using FTIR, X-ray diffraction, differential scanning calorimeter and polarized optical microscope analysis. PPy NPs were prepared by dispersion polymerization method stabilized by PVA in aqueous solution. A polymer nanocomposite with uniform dispersity could be readily obtained due to the enhanced compatibility between the filler and matrix. Compared with the PPy NP-absent PVA, the PPy NP/PVA nanocomposite exhibited an enhanced degree of crystallinity. The degree of crystallinity increased up to 17% at the PPy NP concentration of 1 wt%, compared to the pristine PVA. The PPy NP acted as an effective nucleating agent during the crystallization process, thereby enhancing the degree and rate of crystallization. The kinetics study of the crystallization also revealed the decreased value of the Avrami coefficient in the case of the PPy NP/PVA nanocomposite.

Dephosphorylation of DBC1 by Protein Phosphatase 4 Is Important for p53-Mediated Cellular Functions

  • Lee, Jihye;Adelmant, Guillaume;Marto, Jarrod A.;Lee, Dong-Hyun
    • Molecules and Cells
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    • 제38권8호
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    • pp.697-704
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    • 2015
  • Deleted in breast cancer-1 (DBC1) contributes to the regulation of cell survival and apoptosis. Recent studies demonstrated that DBC is phosphorylated at Thr454 by ATM/ATR kinases in response to DNA damage, which is a critical event for p53 activation and apoptosis. However, how DBC1 phosphorylation is regulated has not been studied. Here we show that protein phosphatase 4 (PP4) dephosphorylates DBC1, regulating its role in DNA damage response. PP4R2, a regulatory subunit of PP4, mediates the interaction between DBC1 and PP4C, a catalytic subunit. PP4C efficiently dephosphorylates pThr454 on DBC1 in vitro, and the depletion of PP4C/PP4R2 in cells alters the kinetics of DBC1 phosphorylation and p53 activation, and increases apoptosis in response to DNA damage, which are compatible with the expression of the phosphomimetic DBC-1 mutant (T454E). These suggest that the PP4-mediated dephosphorylation of DBC1 is necessary for efficient damage responses in cells.

Modeling and Simulation of Lactic Acid Fermentation with Inhibition Effects of Lactic Acid and Glucose

  • Lin, Jian-qiang;Lee, Sang-Mok;Koo, Yoon-Mo
    • Biotechnology and Bioprocess Engineering:BBE
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    • 제9권1호
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    • pp.52-58
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    • 2004
  • An unstructured mathematical model for lactic acid fermentation was developed. This model was able to predict the inhibition effects of lactic acid and glucose and was con-firmed to be valid with various initial concentrations of lactic acid and glucose. Simulation of energy production was made using this mathematical model, and the relationship between the kinetics of energy metabolism and lactic acid production was also analyzed.

Optimization of Algal Photobioreactors Using Flashing Lights

  • Park, Kyong-Hee;Lee, Choul-Gyun
    • Biotechnology and Bioprocess Engineering:BBE
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    • 제5권3호
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    • pp.186-190
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    • 2000
  • It has been reported that flashing light enhances microalgal biomass productivity and overall photosynthetic efficiency. The algal growth kinetics and oxygen production rates under flashing light with various flashing frequencies (5Hz-37 kHz) were compared with those under equivalent continuous light in photobioreactors. A positive flashing light effect was observed with flashing frequencies over 1kHz. The oxygen production rate under conditions of flashing light was slightly higher than that under continuius ligth. The cells under the hight, particularly at higher cell concentrations. When 37kHz flashing light was applied to an LED-based photobioreactor, the concentration was higher than that obtained under continuous light by about 20%. Flashing light may be a reasonable solution to overcome mutual shading, particularly in high-density algal cultures.

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Molecular Computing with Artificial Neurons

  • Michael Conrad;Zauner, Klaus-Peter
    • 정보과학회지
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    • 제18권8호
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    • pp.78-89
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    • 2000
  • Today's computers are built up from a minimal set of standard pattern recognition operations. Logic gates, such as NAND, are common examples. Biomolecular materials offer an alternative approach, both in terms of variety and context sensitivity. Enzymes, the basic switching elements in biological cells, are notable for their ability to discriminate specific molecules in a complex background and to do so in a manner that is sensitive to particular milieu features and indifferent to others, The enzyme, in effect, is a powerful context sensitivity pattern processor that in a rough way can be analogized to a neuron whose input-output behavior is controlled by enzymatic dynamics.

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Nutritional and Hormonal Regulation of Fatty Acid Synthase Gene Expression

  • Shin, Dong-Hoon;Kim, Byung-Yong;Hahm, Young-Tae;Kim, Eunki;Cho, Won-Dai
    • Preventive Nutrition and Food Science
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    • 제2권3호
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    • pp.246-249
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    • 1997
  • The maximum 30-fold level of fatty acid synthase (FAS) mRNA was achieved by 6hr after intraperitoneal injection of insulin. The kinetics and maximum effect of insulin were most evident on he 7.2 kb mRNA. In six hors after insulin administration there was about 100-fold increase in stead-state mRNA level. We observed a sharp decrease in 7.2kb mRNA by 8hr after insulin administation while there was no change in FAS mRNA content between the 6hr and 8hr-sampling periods. In contrast, a maximum induction of 4-fold was shown in the level of 5.1kb mRNA after insulin injection in streptozotocin-diabetic mice.

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