• Title/Summary/Keyword: Bio-system

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Efficient Bio-Automation System using Multi-Tasking (멀티-태스킹을 이용한 효율적인 Bio-Automation 시스템)

  • 정상용;이상호
    • Proceedings of the Korean Information Science Society Conference
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    • 2004.10b
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    • pp.271-273
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    • 2004
  • 최근의 생물학 연구는 '시스템 생물학 또는 시스템 생명공학 '으로 발전하면서 생명체 분석의 속도와 용량이 상상을 초월할 만큼 발전하고 있으며, 이것이 성공여부 판가름의 중요한 변수로 작용함에 따라 다량의 샘플들을 빠른 시간 안에 처리하기 위한 high throughput bio-automation System이 속속 개발되고 있다. 이 연구에서는 현재까지 개발되어 상용화 된 high throughput bio-automation system들의 멀티-태스킹에 있어서의 문제점을 지적하고 개선된 합리적인 멀티-태스킹을 제시하였다.스킹을 제시하였다.

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Characteristics of Protein G-modified BioFET

  • Sohn, Young-Soo
    • Journal of Sensor Science and Technology
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    • v.20 no.4
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    • pp.226-229
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    • 2011
  • Label-free detection of biomolecular interactions was performed using BioFET(Biologically sensitive Field-Effect Transistor) and SPR(Surface Plasmon Resonance). Qualitative information on the immobilization of an anti-IgG and antibody-antigen interaction was gained using the SPR analysis system. The BioFET was used to explore the pI value of the protein and to monitor biomolecular interactions which caused an effective charge change at the gate surface resulting in a drain current change. The results show that the BioFET can be a useful monitoring tool for biomolecular interactions and is complimentary to the SPR system.

Implementation of U-Healthcare System for Chronic Disease Management (만성 질환자 관리를 위한 U-Healthcare 시스템 구현)

  • Ryu, Geun-Teak;Choi, Hun
    • Journal of the Institute of Electronics and Information Engineers
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    • v.51 no.1
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    • pp.233-240
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    • 2014
  • According to the recent increasing trend of the ages, numbers of patients with chronic diseases are increasing and issues for health care are importantly emerged. In this thesis the research implements U-health care system for health care of patients with chronic diseases. The suggested system for health care of patients with chronic diseases composes bio measurement system, mobile gateway and medical information management server, and bio-signals are composed with modules such as electrocardiogram, blood pressure, blood sugar, oxygen saturation if configured as client. Blood sugar check was considered and implemented to be chosen the ways to transmit through bio measurement system or through gateway. Suggested bio measurement system and mobile gateway are transmitted through Bluetooth. The transmitted biodata is searched by observing health check through mobile gateway, by transmitting through network server, and by using client. By implementing bio signal observation system of patients with chronic diseases, present health check is available by monitoring measured bio data, and various bio signals are transmitted in the mobile environment.

Optimal design of bio-inspired isolation systems using performance and fragility objectives

  • Hu, Fan;Shi, Zhiguo;Shan, Jiazeng
    • Structural Monitoring and Maintenance
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    • v.5 no.3
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    • pp.325-343
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    • 2018
  • This study aims to propose a performance-based design method of a novel passive base isolation system, BIO isolation system, which is inspired by an energy dissipation mechanism called 'sacrificial bonds and hidden length'. Fragility functions utilized in this study are derived, indicating the probability that a component, element, or system will be damaged as a function of a single predictive demand parameter. Based on PEER framework methodology for Performance-Based Earthquake Engineering (PBEE), a systematic design procedure using performance and fragility objectives is presented. Base displacement, superstructure absolute acceleration and story drift ratio are selected as engineering demand parameters. The new design method is then performed on a general two degree-of-freedom (2DOF) structure model and the optimal design under different seismic intensities is obtained through numerical analysis. Seismic performances of the biologically inspired (BIO) isolation system are compared with that of the linear isolation system. To further demonstrate the feasibility and effectiveness of this method, the BIO isolation system of a 4-storey reinforced concrete building is designed and investigated. The newly designed BIO isolators effectively decrease the superstructure responses and base displacement under selected earthquake excitations, showing good seismic performance.

Development of Multi-Frequency Impedance Measurement System for Acupuncture Points and Preliminary Report of Measurement Results (Multi-frequency 자극 방식을 이용한 생체 전기 임피던스 측정 시스템 설계 및 경혈의 전기적 특이성에 대한 고찰)

  • Kim, Soo-Byeong;Lee, Na-Ra;Lee, Seung-Wook;Choi, Jun-Young;Lee, Yong-Heum
    • Korean Journal of Acupuncture
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    • v.29 no.1
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    • pp.71-81
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    • 2012
  • Objectives : The purpose of this paper was to suggest new diagnostic method that was to supersede the estimation of electrical properties at acupoints. Thus, we developed the multi- frequencies bioelectrical impedance measurement system so as to analyze the state of bio-ions in body fluid as body compositions, not skin impedance at acupoint. Methods : At low frequency, the current does not penetrate the cell membrane and at high frequency, the current passes through both intracellular and extracellular fluid because of the decreas of cell membrane impedance. To confirm the reflection of composition in extracellular fluid or intracellular fluid of segment such as acupoint, the system was developed to detect the acupoint potential between adjacent two points in the area of LU3, LU4 and LU9 using 5,50 and 200KHz. Results : The detected acupoint potential has been decreased according to elevation of frequency. As a result of correlation of left/right identical acupoint, we observed a high correlation of three types of acupoint potential at multi-frequencies. Moreover, we observed the low correlation at 5KHz, and that was a significant factor to be considered as unbalanced relationship of identical acupoints. Conclusions : On the basis of meridian theoretical point of view, we may infer the acupoint's physiological composition using the multi-frequencies bioelectrical impedance measurement system.

Development a glucose-FIA system with a fiber optic oxygen sensor

  • Sohn, Ok-Jae;Lam, Tuan-Hung;Rhee, Jong-Il
    • 한국생물공학회:학술대회논문집
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    • 2005.10a
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    • pp.730-734
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    • 2005
  • Flow injection analysis (FIA) system was developed to monitor glucose concentrations in biotechnological processes. A fiber optic oxygen sensor was used to determine consumption of oxygen concentration by reaction of immobilized glucose oxidase (GOD). The GOD was immobilized on VA-Epoxy carrier and integrated into FIA system. A calibration curve for glucose was obtained in the range of 0.5 $g/L{\sim}3.0$ g/L.

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Design of Clustering CoaT Vision Model Based on Transformer (Transformer 기반의 Clustering CoaT 모델 설계)

  • Bang, Ji-Hyeon;Park, Jun;Jung, Se-Hoon;Sim, Chun-Bo
    • Proceedings of the Korea Information Processing Society Conference
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    • 2022.05a
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    • pp.546-548
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    • 2022
  • 최근 컴퓨터 비전 분야에서 Transformer를 도입한 연구가 활발히 연구되고 있다. 이 모델들은 Transformer의 구조를 거의 그대로 사용하기 때문에 확장성이 좋으며 large 스케일 학습에서 매우 우수한 성능을 보여주었다. 하지만 Transformer를 적용한 비전 모델은 inductive bias의 부족으로 학습 시 많은 데이터와 시간을 필요로 하였다. 그로 인하여 현재 많은 Vision Transformer 개선 모델들이 연구되고 있다. 본 논문에서도 Vision Transformer의 문제점을 개선한 Clustering CoaT 모델을 제안한다.

Design and Implementation of HRNet Model Combined with Spatial Information Attention Module of Polarized Self-attention (편광 셀프어텐션의 공간정보 강조 모듈을 결합한 HRNet 모델 설계 및 구현)

  • Jin-Seong Kim;Jun Park;Se-Hoon Jung;Chun-Bo Sim
    • Proceedings of the Korea Information Processing Society Conference
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    • 2023.05a
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    • pp.485-487
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    • 2023
  • 컴퓨터 비전의 하위 태스크(Task)인 의미론적 분할(Semantic Segmentation)은 자율주행, 해상에서 선박찾기 등 다양한 분야에서 연구되고 있다. 기존 FCN(Fully Conovlutional Networks) 기반 의미론적 분할 모델은 다운샘플링(Dowsnsampling)과정에서 공간정보의 손실이 발생하여 정확도가 하락했다. 본 논문에서는 공간정보 손실을 완화하고자 PSA(Polarized Self-attention)의 공간정보 강조 모듈을 HRNet(High-resolution Networks)의 합성곱 블록 사이에 추가한다. 실험결과 파라미터는 3.1M, GFLOPs는 3.2G 증가했으나 mIoU는 0.26% 증가했다. 공간정보가 의미론적 분할 정확도에 영향이 미치는 것을 확인했다.

Extending Jabber Messaging System for Effective Collaboration (효과적인 협업지원을 위한 Jabber 메시징 시스템의 확장)

  • Lee, Keon-Woong;Ahn, Geon-Tae;Hwang, Eui-Yoon;Kim, Jin-Hong;Lee, Myung-Joon
    • The KIPS Transactions:PartD
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    • v.10D no.7
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    • pp.1161-1170
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    • 2003
  • The BioPlace system is a web-based collaborative system which offers effective exchange of information and research activities among the genomic researchers. BioPlace supports collaborative works among the related group members through Personal Workspces and Team Workspces which are virtual spaces on the web. Jabber is an open messaging system based on XML, giving an efficient way of developing messaging services by providing various functionality for real-time communication and interoperability with other foreign messaging systems. In this paper, we have designed additional Jabber XML protocol to extend Jabber messaging system to be used as real-time communication methods on the BioPlace collaborative system. Also, according to the protocol, we have developed both the extended Jabber server and the BioPlace messenger client.

Workflow-based Bio Data Analysis System for HPC (HPC 환경을 위한 워크플로우 기반의 바이오 데이터 분석 시스템)

  • Ahn, Shinyoung;Kim, ByoungSeob;Choi, Hyun-Hwa;Jeon, Seunghyub;Bae, Seungjo;Choi, Wan
    • KIPS Transactions on Software and Data Engineering
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    • v.2 no.2
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    • pp.97-106
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    • 2013
  • Since human genome project finished, the cost for human genome analysis has decreased very rapidly. This results in the sharp increase of human genome data to be analyzed. As the need for fast analysis of very large bio data such as human genome increases, non IT researchers such as biologists should be able to execute fast and effectively many kinds of bio applications, which have a variety of characteristics, under HPC environment. To accomplish this purpose, a biologist need to define a sequence of bio applications as workflow easily because generally bio applications should be combined and executed in some order. This bio workflow should be executed in the form of distributed and parallel computing by allocating computing resources efficiently under HPC cluster system. Through this kind of job, we can expect better performance and fast response time of very large bio data analysis. This paper proposes a workflow-based data analysis system specialized for bio applications. Using this system, non-IT scientists and researchers can analyze very large bio data easily under HPC environment.