• Title/Summary/Keyword: Bio material

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Investigation of Conserved Genes in Microorganism (미생물의 보존적 유전자 탐색)

  • Lee Dong-Geun;Lee Jae-Hwa;Lee Sang-Hyeon;Ha Bae-Jin;Shim Doo-Hee;Park Eun-Kyung;Kim Jin-Wook;Li Hua-Yue;Nam Chun-Suk;Kim Nam Young;Lee Eo-Jin;Back Jin-Wook;Ha Jong-Myung
    • Journal of Life Science
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    • v.15 no.2 s.69
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    • pp.261-266
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    • 2005
  • To figure out conserved genes in 66 microbial species and measuring the degree of conservation, analyses based on COG (Clusters of Orthologous Groups of proteins) algorithm were applied. Sixty-six microbial genomes, including three eukaryotes, hold 63 conserved orthologs in common. The majority $(82.5\%)$ of the conserved genes was related to translation, meaning the importance of protein in living creatures. Ribosomal protein S12 (COG0048) and L14 (COG0093) were more conserved genes than others from the distance value analysis. Phylogenetically related microbes grouped in genome analysis by average and standard deviation of 63 conserved genes. The 63 conserved genes, found in this research, would be useful in basic research and applied ones such as antibiotic development.

Biosynthesis of Polyunsaturated Fatty Acids: Metabolic Engineering in Plants (고도불포화지방산 생합성: 식물에서의 대사공학적 응용)

  • Kim, Sun-Hee;Kim, So-Yun;Kim, Jong-Bum;Roh, Kyung-Hee;Kim, Young-Mi;Park, Jong-Sug
    • Journal of Applied Biological Chemistry
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    • v.52 no.3
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    • pp.93-102
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    • 2009
  • Polyunsaturated fatty acids (PUFA), especially eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) have significantly beneficial effects on health in relation to cardiovascular, immune, and inflammatory conditions and they are involved in determining the biophysical properties of membranes as well as being precursors for signaling molecules. PUFA biosynthesis is catalyzed by sequential desaturation and fatty acyl elongation reactions. This aerobic biosynthetic pathway was thought to be taxonomically conserved, but an alternative anaerobic pathway for the biosynthesis of PUFA is now known to contain analogous polyketide synthases (PKS). Certain fish oil can be a rich source of PUFA although processed marine oil is generally undesirable as food ingredients because of the associated objectionable flavors that are difficult and cost-prohibitive to remove. Oil-seed plants contain only the 18-carbon polyunsaturated fatty acid alpha-linolenic acid, which is not converted in the human body to EPA and DHA. It is now possible to engineer common oilseeds which can produce EPA and DHA and this has been the focus of a number of academic and industrial research groups. Recent advances and future prospects in the production of EPA and DHA in oilseed crops are discussed here.

Metabolic Engineering for Resveratrol Derivative Biosynthesis in Escherichia coli

  • Jeong, Yu Jeong;Woo, Su Gyeong;An, Chul Han;Jeong, Hyung Jae;Hong, Young-Soo;Kim, Young-Min;Ryu, Young Bae;Rho, Mun-Chual;Lee, Woo Song;Kim, Cha Young
    • Molecules and Cells
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    • v.38 no.4
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    • pp.318-326
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    • 2015
  • We previously reported that the SbROMT3syn recombinant protein catalyzes the production of the methylated resveratrol derivatives pinostilbene and pterostilbene by methylating substrate resveratrol in recombinant E. coli. To further study the production of stilbene compounds in E. coli by the expression of enzymes involved in stilbene biosynthesis, we isolated three stilbene synthase (STS) genes from rhubarb, peanut, and grape as well as two resveratrol O-methyltransferase (ROMT) genes from grape and sorghum. The ability of RpSTS to produce resveratrol in recombinant E. coli was compared with other AhSTS and VrSTS genes. Out of three STS, only AhSTS was able to produce resveratrol from p-coumaric acid. Thus, to improve the solubility of RpSTS, VrROMT, and SbROMT3 in E. coli, we synthesized the RpSTS, VrROMT and SbROMT3 genes following codon-optimization and expressed one or both genes together with the cinnamate/4-coumarate:coenzyme A ligase (CCL) gene from Streptomyces coelicolor. Our HPLC and LC-MS analyses showed that recombinant E. coli expressing both ScCCL and RpSTSsyn led to the production of resveratrol when p-coumaric acid was used as the precursor. In addition, incorporation of SbROMT3syn in recombinant E. coli cells produced resveratrol and its mono-methylated derivative, pinostilbene, as the major products from p-coumaric acid. However, very small amounts of pterostilbene were only detectable in the recombinant E. coli cells expressing the ScCCL, RpSTSsyn and SbROMT3syn genes. These results suggest that RpSTSsyn exhibits an enhanced enzyme activity to produce resveratrol and SbROMT3syn catalyzes the methylation of resveratrol to produce pinostilbene in E. coli cells.

A Study on The Ultra-precision Polishing Method of Co-Cr-Mo alloy Using MR Fluid Polishing (MR Fluid Polishing을 이용한 Co-Cr-Mo alloy의 초정밀 연마 방법)

  • Shin, Bong-Cheol;Kim, Byung-Chan;Song, Ki-Hyeok;Cho, Myeong-Woo
    • Design & Manufacturing
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    • v.11 no.3
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    • pp.8-12
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    • 2017
  • In general, metallic bio-materials is more widely used in solid tissue like bone or tooth than flexible tissue such as skin or muscle. Especially, Cobalt Chrome Molybdenum(Co-Cr-Mo), which is used in tooth surgery, has a great corrosion resistance. Because this bio-material is non-toxic in human body, and has a bio-compatibility that the vital reaction is not occurred with tissue in body. However the chemical reaction is occurred by fatal matter that deteriorate the property of material surface in conventional polishing, and it can affect to fatal disease in human body or decrease the material properties such as hardness, yield strength or bio-compatibility. This surface in poor condition can cause development of corrosion or bacteria. In this study, MR fluid polishing is used to minimize the scratch, pit or surface flaws generated in conventional polishing. Surface roughness is measured according to the polishing condition to obtain fine surface condition.

A Study of Field Mixing Ratio using Bio-grouting Injection Material (바이오그라우팅 주입재를 이용한 현장 배합비에 관한 연구)

  • Park, Ilehoon;Kim, Daehyeon
    • Journal of the Korean Geosynthetics Society
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    • v.16 no.2
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    • pp.47-54
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    • 2017
  • This study aims to develop a bio-grouting material in a powder form like cement. Sand gel samples were produced with the ratio of sodium silicate No.3 to water (50 : 50, 35 : 65, 20 : 80), and the ratio of cement to bio-grouting material (100 : 0, 90 : 10, 70 : 30) to select a mixing ratio of bio-grouting, respectively, and then analyzed the geltime over time. The uniaxial compressive strength was evaluated to select and suggest a mixing ratio optimized for construction conditions. The indoor test reveals that preferred geltime and uniaxial compressive strength is obtained in 35 : 65 with respect to the ratio of sodium silicate No.3 to water, and 90 : 10 with respect to the ratio of cement to bio-grouting material to demonstrate best optimal mixing ratios.

Electrical sensing of SOI nano-wire BioFET by using back-gate bias (Back-gate bias를 이용한 SOI nano-wire BioFET의 electrical sensing)

  • Jung, Myung-Ho;Ahn, Chang-Geun;Cho, Won-Ju
    • Proceedings of the Korean Institute of Electrical and Electronic Material Engineers Conference
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    • 2008.06a
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    • pp.354-355
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    • 2008
  • The sensitivity and sensing margin of SOI(silicon on insulator) nano-wire BioFET(field effect transistor) were investigated by using back-gate bias. The channel conductance modulation was affected by doping concentration, channel length and channel width. In order to obtain high sensitivity and large sensing margin, low doping concentration, long channel and narrow width are required. We confirmed that the electrical sensing by back-gate bias is effective method for evaluation and optimization of bio-sensor.

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