• Title/Summary/Keyword: Bark Identification

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Bark Identification Using a Deep Learning Model (심층 학습 모델을 이용한 수피 인식)

  • Kim, Min-Ki
    • Journal of Korea Multimedia Society
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    • v.22 no.10
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    • pp.1133-1141
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    • 2019
  • Most of the previous studies for bark recognition have focused on the extraction of LBP-like statistical features. Deep learning approach was not well studied because of the difficulty of acquiring large volume of bark image dataset. To overcome the bark dataset problem, this study utilizes the MobileNet which was trained with the ImageNet dataset. This study proposes two approaches. One is to extract features by the pixel-wise convolution and classify the features with SVM. The other is to tune the weights of the MobileNet by flexibly freezing layers. The experimental results with two public bark datasets, BarkTex and Trunk12, show that the proposed methods are effective in bark recognition. Especially the results of the flexible tunning method outperform state-of-the-art methods. In addition, it can be applied to mobile devices because the MobileNet is compact compared to other deep learning models.

Comparison of Off-the-Shelf DCNN Models for Extracting Bark Feature and Tree Species Recognition Using Multi-layer Perceptron (수피 특징 추출을 위한 상용 DCNN 모델의 비교와 다층 퍼셉트론을 이용한 수종 인식)

  • Kim, Min-Ki
    • Journal of Korea Multimedia Society
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    • v.23 no.9
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    • pp.1155-1163
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    • 2020
  • Deep learning approach is emerging as a new way to improve the accuracy of tree species identification using bark image. However, the approach has not been studied enough because it is confronted with the problem of acquiring a large volume of bark image dataset. This study solved this problem by utilizing a pretrained off-the-shelf DCNN model. It compares the discrimination power of bark features extracted by each DCNN model. Then it extracts the features by using a selected DCNN model and feeds them to a multi-layer perceptron (MLP). We found out that the ResNet50 model is effective in extracting bark features and the MLP could be trained well with the features reduced by the principal component analysis. The proposed approach gives accuracy of 99.1% and 98.4% for BarkTex and Trunk12 datasets respectively.

A Study on a Morphological Identification of Notoginseng Radix (삼칠근(三七根)의 형태(形態)에 관한 연구(硏究))

  • Moon, Seong-Ho;Lee, Young-Jong
    • The Korea Journal of Herbology
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    • v.23 no.2
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    • pp.25-31
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    • 2008
  • Objectives : In order to distinguish morphological characteristics of trunk bark and root bark of Ulmus davidiana var. japonica (Rehder) Nakai and the trunk bark and root bark of Hemiptelea davidii Planchon were sampled and compared in terms of their external and internal features with flour states according to their medical use, through microscopic examination. Methods : The slice of the tested material made by paraffin section technique was colored with Safranine Malachite Green contrast methods, and the flour of it was mounted by the liquid made by the same ratio of each of glycerin, acetic acid, and water, and then observed and photographed by olymphus-BHT. Results : 1. Internal Features 1) A large parenchymatous cell was observed in the phloem of the slice of both trunk bark and root bark of Ulmi Cortex, However, both of the trunk bark and root bark of Hemipteleae Cortex did not have parenchymatous cell in the phloem; instead, stone cells including much square crystal of calcium oxalate were distributed around fiber bundle, and the parenchymatous cell included much druse crystal of calcium oxalate. 2) In both the Ulmi Cortex and Hemipteleae Cortex, rhytidome was observed in trunk bark, but not in root bark, but in the parenchymatous cell of the root bark of the Ulmi Cortex contained starch grain. 2. Flour States 1) In the flour of root bark of the Ulmi Cortex, a large parenchymatous cell was observed. However, in the flour of trunk bark and root bark of Hemipteleae Cortex, no parenchymatous eel was found; instead, stone cell including square crystal of calcium oxalate and druse crystal of calcium oxalate were observed. 2) There was no remarkable difference between the trunk bark and root bark of Hemipteleae Cortex. However, starch grain was contained in the parenchymatous cell of the root bark of Ulmi Cortex but not in the trunk bark of it. Conclusions : There were some morphological differences in external, internal, and flour parts of Ulmi Cortex and Hemipteleae Cortex. In particular, there was a morphological difference in flour states between the trunk bark and root bark of Ulmi Cortex, it is possible to use microscope to distinguish their flour states.

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A Study on a Morphological Identification of Acanthopanacis Cortex (오가피(五加皮)의 형태(形態)에 관한 연구(硏究))

  • Kim, Hyung-Seok;Han, Hyo-Sang;Lee, Young-Jong
    • The Korea Journal of Herbology
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    • v.23 no.2
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    • pp.41-49
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    • 2008
  • Objectives : In order to distinguish morphological characteristics of trunk bark and root bark of Ulmus davidiana var. japonica (Rehder) Nakai and the trunk bark and root bark of Hemiptelea davidii Planchon were sampled and compared in terms of their external and internal features with flour states according to their medical use, through microscopic examination. Methods : The slice of the tested material made by paraffin section technique was colored with Safranine Malachite Green contrast methods, and the flour of it was mounted by the liquid made by the same ratio of each of glycerin, acetic acid, and water, and then observed and photographed by olympus-BHT. Results : 1. Internal Features 1) A large parenchymatous cell was observed in the phloem of the slice of both trunk bark and root bark of Ulmi Cortex. However, both of the trunk bark and root bark of Hemipteleae Cortex did not have parenchymatous cell in the phloem; instead, stone cells including much square crystal of calcium oxalate were distributed around fiber bundle, and the parenchymatous cell included much druse crystal of calcium oxalate. 2) In both the Ulmi Cortex and Hemipteleae Cortex, rhytidome was observed in trunk bark, but not in root bark, but in the parenchymatous cell of the root bark of the Ulmi Cortex contained starch grain. 2. Flour States 1) In the flour of root bark of the Ulmi Cortex, a large parenchymatous cell was observed. However, in the flour of trunk bark and root bark of Hemipteleae Cortex, no parenchymatous eel was found; instead, stone cell including square crystal of calcium oxalate and druse crystal of calcium oxalate were observed. 2) There was no remarkable difference between the trunk bark and root bark of Hemipteleae Cortex. However, starch grain was contained in the parenchymatous cell of the root bark of Ulmi Cortex but not in the trunk bark of it. Conclusions : There were some morphological differences in external, internal, and flour parts of Ulmi Cortex and Hemipteleae Cortex. In particular, there was a morphological difference in flour states between the trunk bark and root bark of Ulmi Cortex, it is possible to use microscope to distinguish their flour states.

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Construction of a Bark Dataset for Automatic Tree Identification and Developing a Convolutional Neural Network-based Tree Species Identification Model (수목 동정을 위한 수피 분류 데이터셋 구축과 합성곱 신경망 기반 53개 수종의 동정 모델 개발)

  • Kim, Tae Kyung;Baek, Gyu Heon;Kim, Hyun Seok
    • Journal of Korean Society of Forest Science
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    • v.110 no.2
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    • pp.155-164
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    • 2021
  • Many studies have been conducted on developing automatic plant identification algorithms using machine learning to various plant features, such as leaves and flowers. Unlike other plant characteristics, barks show only little change regardless of the season and are maintained for a long period. Nevertheless, barks show a complex shape with a large variation depending on the environment, and there are insufficient materials that can be utilized to train algorithms. Here, in addition to the previously published bark image dataset, BarkNet v.1.0, images of barks were collected, and a dataset consisting of 53 tree species that can be easily observed in Korea was presented. A convolutional neural network (CNN) was trained and tested on the dataset, and the factors that interfere with the model's performance were identified. For CNN architecture, VGG-16 and 19 were utilized. As a result, VGG-16 achieved 90.41% and VGG-19 achieved 92.62% accuracy. When tested on new tree images that do not exist in the original dataset but belong to the same genus or family, it was confirmed that more than 80% of cases were successfully identified as the same genus or family. Meanwhile, it was found that the model tended to misclassify when there were distracting features in the image, including leaves, mosses, and knots. In these cases, we propose that random cropping and classification by majority votes are valid for improving possible errors in training and inferences.

Isolation and Identification of Adventitious Root Formation Inducing Substances from Cortex of cinnamomum cassia J.Presl (육계(Cortex of Cinnamomum cassia J.Presl) 추출물로부터 부정근 형성 유도물질 분리 및 동정)

  • Joo Ho Yeo;Jeong Kyu Baek;Jee Sung Park;Kun Woo Kim
    • Korean Journal of Plant Resources
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    • v.37 no.1
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    • pp.11-21
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    • 2024
  • In this study, as a result of exploring the physiological activity of plants useful for agriculture on various plant resources, it was possible to confirm an activity similar to auxin that promotes plant rooting in methanol extract of Cinnamon Bark (cortex of Cinnamomum cassia J.Presl). After separating the active body by applying column chromatography and HPLC to the CHCl3 active fraction obtained by solvent extraction for each polarity from the methanol extract of cinnamon bark, cinnamyl alcohol was identified through GC/MS analysis. By bioassay using cinnamyl alcohol standard and the active fraction separated and purified from the methanol extract of cinnamon bark, the rooting rate of mung bean seedlings of the cinnamyl alcohol standard was 290% compared with the untreated control at 134.2 ㎍/mL concentration, and the adventitious root formation activity similar to the rooting rate (268.6%; 100 ㎍/mL) of the active fraction was shown. In conclusion, it is believed that cinnamyl alcohol contained in methanol extract of Cinnamon Bark is the main compound that induces adventitious root formation in mung bean.

Isolation and Identification of Stilbene glycosides from the Bark of Pinus koraiensis (잣나무 수피의 Stilbene glycosides의 분리 및 동정)

  • Song, Hong-Keun
    • Journal of the Korean Wood Science and Technology
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    • v.29 no.4
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    • pp.97-102
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    • 2001
  • EtOAc extract from the bark of Pinus koraiensis Sieb. et Zucc was isolated by column chromatography which was packed with Sephadex LH-20 or TSK-gel HW-40F. Several stilbene glycosides were identified by $^1H{\cdot}^{13}C$-NMR, HMQC, HMBC and $FAB^+$ MS. Three stilbene glycosides, Z-pinostilbenoside, E-desoxyrhaponticin, and E-resveratroloside, were identified.

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Simultaneous Analysis of the Coloring Compounds in Indigo, Phellodendron bark, and Madder Dye Using HPLC-DAD-MS

  • Ahn, Cheunsoon;Zeng, Xia;Obendorf, S. Kay
    • Journal of the Korean Society of Clothing and Textiles
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    • v.37 no.6
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    • pp.827-836
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    • 2013
  • Indigotin, indirubin, berberine, palmatine, alizarin, and purpurin are major pigments of indigo plant, Phellodendron bark, and madder. The six pigments were examined using the HPLC-DAD-MS instrument for the purpose of the simultaneous detection of the pigments in a single sample run. The HPLC-DAD-MS method examined the individual pigment solutions in DMSO, a solution containing 6 pigments, and the DMSO extract of the silk dyed with a dye solution of 5 pigments excluding indirubin. The retention times of the HPLC chromatograms, ${\lambda}_{max}$ of the uv-vis absorption bands in the DAD analyses, and the molecular ions detected for the compound peaks in the MSD analyses were consistent throughout the analyses of individual pigment solutions, mixed pigment solutions, and dye extracted from silk dyeing. The developed instrumental method of the simultaneous detection of six pigments can identify dye in an exhumed textile if the textile is dyed using any one (or multiple) pigments of indigo, Phellodendron bark, or madder plant.

Species Identification and Tree-Ring Dating of Coffin Woods Excavated at Ma-Jeon Relic in Jeonju, Korea (전주 마전유적 출토 목관재의 수종식별 및 연륜연대 분석)

  • Park, Won-Kyu;Yoon, Doo-Hyoung;Park, Sue-Hyun
    • Journal of the Korean Wood Science and Technology
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    • v.34 no.6
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    • pp.12-20
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    • 2006
  • The objectives of this study were to identify the species of coffin woods excavated at Ma-jeon relic in Jeonju and to date this coffin using tree-ring method. Al coffin woods were identified as red pines, most possibly, Pinus densiflora S. et Z. Tree-ring dating provides a calender year to each ring and produces the cutting date, if the bark presents. Due to the presence of bark and complete latewood present, the cutting date of the tree for coffin turned out between A.D. 1637 autumn and 1638 spring. However, due to the seasoning and storage periods, actual coffin manufacturing and burial time may be a little different from the tree-ring date.