• Genomics & Informatics
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• 제21권2호
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• pp.22.1-22.15
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• 2023

Kidney renal clear cell carcinoma (KIRC) is one of the most aggressive cancer type of the urinary system. Metastatic KIRC patients have poor prognosis and limited therapeutic options. Ankyrin 3 (ANK3) is a scaffold protein that plays important roles in maintaining physiological function of the kidney and its alteration is implicated in many cancers. In this study, we investigated differential expression of ANK3 in KIRC using GEPIA2, UALCAN, and HPA databases. Survival analysis was performed by GEPIA2, Kaplan-Meier plotter, and OS-kirc databases. Genetic alterations of ANK3 in KIRC were assessed using cBioPortal database. Interaction network and functional enrichment analyses of ANK3-correlated genes in KIRC were performed using GeneMANIA and Shiny GO, respectively. Finally, the TIMER2.0 database was used to assess correlation between ANK3 expression and immune infiltration in KIRC. We found that ANK3 expression was significantly decreased in KIRC compared to normal tissues. The KIRC patients with low ANK3 expression had poorer survival outcomes than those with high ANK3 expression. ANK3 mutations were found in 2.4% of KIRC patients and were frequently co-mutated with several genes with a prognostic significance. ANK3-correlated genes were significantly enriched in various biological processes, mainly involved in peroxisome proliferator-activated receptor (PPAR) signaling pathway, in which positive correlations of ANK3 with PPARA and PPARG expressions were confirmed. Expression of ANK3 in KIRC was significantly correlated with infiltration level of B cell, CD8+ T cell, macrophage, and neutrophil. These findings suggested that ANK3 could serve as a prognostic biomarker and promising therapeutic target for KIRC.

• International Journal of Oral Biology
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• 제33권1호
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• pp.33-43
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• 2008

In the process of bone remodeling, mineral phase of bone is dissolved by osteoclasts, resulting in elevation of calcium concentration in micro-environment. This study was performed to explore the effect of high extracellular calcium ($Ca{^{2+}}_e$) on mineralized nodule formation and on the expression of progressive ankylosis (Ank), plasma cell membrane glycoprotein-1 (PC-1) and osteopontin by primary cultured mouse calvarial cells. Osteoblastic differentiation and mineralized nodule formation was induced by culture of mouse calvarial cells in osteoblast differentiation medium containing ascorbic acid and ${\beta}$-glycerophosphate. Although Ank, PC-1 and osteopontin are well known inhibitors of mineralization, expression of these genes were induced at the later stage of osteoblast differentiation during when expression of osteocalcin, a late marker gene of osteoblast differentiation, was induced and mineralization was actively progressing. High $Ca{^{2+}}_e$(10 mM) treatment highly enhanced mRNA expression of Ank, PC-1 and osteopontin in the late stage of osteoblast differentiation but not in the early stage. Inhibition of p44/42 MAPK activation but not that of protein kinase C suppressed high $Ca{^{2+}}_{e^-}$induced expression of Ank, PC-1 and osteopontin. When high $Ca{^{2+}}_e$(5 mM or 10 mM) was present in culture medium during when mineral deposition was actively progressing, matrix calcifiation was significantly increased by high $Ca{^{2+}}_e$. This stimulatory effect was abolished by pyrophosphate (5 mM) or levamisole (0.1-0.5 mM), an alkaline phosphatase inhibitor. In addition, probenecid (2mM), an inhibitor of Ank, suppressed matrix calcification in both control and high $Ca{^{2+}}_{e^-}$treated group, suggesting the possible role of Ank in matrix calcification by osteoblasts. Taken together, these results showed that high $Ca{^{2+}}_e$ stimulates expression of Ank, PC-1 and osteopontin as well as matrix calcification in late differentiation stage of osteoblasts and that p44/42 MAPK activation is involved in high $Ca{^{2+}}_{e^-}$induced expression of Ank, PC-1 and osteopontin.

• 생물정신의학
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• 제22권4호
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• pp.173-178
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• 2015

Objectives Previous genome-wide association studies have indicated the association between ankyrin 3 (ANK3) and the vulnerability of schizophrenia. We investigated the association between single nucleotide polymorphisms (SNPs) covering the whole ANK3 locus and schizophrenia in the Korean population. Methods The study subjects were 582 patients with schizophrenia and 502 healthy controls. Thirty-eight tag SNPs on ANK3 and five additional SNPs showing significant association with schizophrenia in previous studies were genotyped. Results Three (rs10994181, rs16914791, rs1938526) of 43 SNPs showed a nominally significant association (p < 0.05) with at least one genotype model. But none of these associations remained significant after adjusting for multiple testing errors with Bonferroni's correction. Conclusions We could not identify a significant association between ANK3 and schizophrenia in the Korean population. However, three SNPs showing an association signal with nominal significance need to be investigated in future studies with higher statistical power and more specific phenotype crossing the current diagnostic categories.

• 한국미생물생명공학회:학술대회논문집
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• 한국미생물생명공학회 2003년도 2003 Annual Meeting, BioExhibition and International Symposium
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• pp.201-201
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• 2003

• 대한소아치과학회지
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• 제45권2호
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• pp.144-153
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• 2018

본 연구는 치근 및 치주조직의 형성과정동안 Sonic Hedgehog (SHH) signaling의 역할에 대해 알아보고자 치성간엽에서 조직특이적으로 Smoothened (Smo)가 활성화 또는 차단되는 mouse를 제작하여 분석하였다. 생후 28일경 Smo 활성화모델에서는 H-E 염색 시 얇은 두께의 치근상아질, 넓어진 치수강, 치주인대공간에 느슨하게 배열되어있는 섬유들이 관찰되었다. 면역조직화학염색 시 Smo 활성화모델은 wild type mouse와 비교하여 백악질, 치주인대 그리고/또는 백악모세포의 표식자인 Bsp, Dmp1, Periostin, Ank 같은 기질 단백질들의 발현이 현저히 감소하였다. 그러나 Smo 차단모델은 wild type mouse와 비교하여 이러한 기질 단백질들의 발현에 차이가 보이지 않았다. 본 연구를 통하여 치근 및 치주조직의 정상적인 형성과정에 낮은 수준으로 조절되는 SHH signaling이 필요하다는 것을 확인할 수 있었다.

• Archives of Pharmacal Research
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• 제26권12호
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• pp.1009-1013
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• 2003

A new pterocarpan, (-)-maackiain 3-sulfate (1) was isolated from the methanol extract of roots of Sophora subprostarata together with (-)-maackiain(2), trifolirhizin (3), lupeol (4), ononin (5),7,4'-dihydroxyflavone (5), and (+)-syringaresinol (7). The structure of 1 was determined by analyses of 2D NMR and HRFABMS. Compounds 5-7 were isolated from this plant for the first time.

• 대한의용생체공학회:의공학회지
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• 제17권3호
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• pp.379-386
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• 1996

This paper describes an approach for classifying myoelectric patterns using a multilayer perceptrons (MLP's) and hidden Markov models (HMM's) hybrid classifier. The dynamic aspects of EMG are important for tasks such as continuous prosthetic control or vari- ous time length EMG signal recognition, which have not been successfully mastered by the most neural approaches. It is known that the hidden Markov model (HMM) is suitable for modeling temporal patterns. In contrasts the multilayer feedforward networks are suitable for static patterns. Ank a lot of investigators have shown that the HMM's to be an excellent tool for handling the dynamical problems. Considering these facts, we suggest the combination of MLP and HMM algorithms that might lead to further improved EMG recognition systems.

• International Journal of Industrial Entomology and Biomaterials
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• 제37권2호
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• pp.49-54
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• 2018

To artificially enhance antimicrobial peptide expression in Bombyx mori, we constructed genetically engineered silkworms overexpressing Rel family transcription factor. The truncated BmRelish1 (BmRelish1t) gene contained a Rel homolog domain (RHD), nuclear localization signal (NLS), acidic and hydrophobic amino acid (AHAA)-rich region, and death domain (DD), but no ankyrin-repeat (ANK) domain. The BmRelish1t gene was controlled by B. mori cytoplasmic actin 3 promoter in the PiggyBac transposon vector. Chromosome analysis of G1 generations of a transgenic silkworm with EGFP expression confirmed stable insertion of BmRelish1t. BmRelish1t gene overexpression in transgenic silkworms resulted in higher mRNA expression levels of B. mori antimicrobial peptides such as lebocin(~20.5-fold), moricin(~8.7-fold), and nuecin(~17.4-fold) than those in normal silkworms.

• 국제학술발표논문집
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• The 3th International Conference on Construction Engineering and Project Management
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• pp.1128-1133
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• 2009

Recently super complex culture shopping facility development seeks consumer' convenience present and are coming restaurant neighborhood, cinema, shopping, hotel etc, according to intensive plan. Such as complex culture shopping facility was developed to most subway station area center and have concept that is space for a main facilities or space for environment protection, citizens' a rest in city. Howeve,r space of recently domestic large size complex culture shopping facility that do not plan systematically was lacking and caused result that do not use efficiently space. Limited extent of research that define complex culture shopping equipment and analyze form of space and present space planning with analysis of research connected with complex usage development.

• 생명과학회지
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• 제26권3호
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• pp.331-337
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• 2016

섬유모세포성장인자-23(fibroblast growth factor 23, FGF23)은 뼈를 형성하는 세포에서 주로 생성되지만 그 작용은 신장에서 이루어진다. FGF23은 신장의 나트륨-인산염 공동수송체(Na-phosphate cotransporter)를 억제하여 인산염 재흡수를 감소시킨다. 이렇게 함으로써 인산염 항상성을 조절하는 작용과는 별개로 이것은 in vivo에서 뼈 형성을 억제하는 것으로 알려져 있다. 두개골 조골세포를 이용한 연구에서도 FGF23은 조골세포의 발달, 즉 분화 및 기질의 광화(mineralization)에 악영향을 미쳤다. 본 연구는 FGF23이 골수 유래 간엽줄기세포에서 조골세포로의 발달에 있어서도 유사한 영향을 줄 것인지를 조사한 것이다. 간엽줄기세포주인 D1 세포를 β-glycerophosphate, ascorbic acid, dexamethazone이 포함된 조골배(osteogenic medium)에 배양하여 alkaline phosphatase (Alp) 염색으로 분화를, Alizarin red 염색과 기질의 칼슘 함량의 분석을 통해 광화를 평가하였다. 분화 촉진 유전자인 Runx2, osteocalcin, Alp와 광화 억제 유전자인 Enpp1, Ank의 발현은 RT-PCR로 분석하였다. D1 세포의 증식과 조골세포로의 분화는 생리학적 농도를 훨씬 초과하는 FGF23의 농도에 의해서도 달라지지 않았다. FGF23 처치 1주, 2주, 3주 후 Alizarin red 염색에 의한 광화 정도의 평가에서도 대조군과 실험군의 차이는 발견되지 않았다. 그러나 두 군 모두 시간이 경과함에 따라 광화는 증가되었다. 기질에 침착된 칼슘의 양 또한 차이가 없었다. 분화 촉진 유전자와 광화 억제 유전자의 발현도 양 군 간에 다르지 않았다. 이러한 부정적인(negative) 결과는 FGF23에 의한 세포 내 신호전달의 장애가 아님이 Erk 인산화로 확인되었다. 이상의 결과로 미루어 두개골의 조골세포와 달리 FGF23은 간엽줄기세포에서 조골세포로의 분화와 광화에는 영향을 미치지 않을 것으로 사료된다.