• The Plant Pathology Journal
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• 제39권6호
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• pp.600-613
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• 2023

Fusarium oxysporum is the main pathogen causing Fusarium basal rot in onion (Allium cepa L.), which incurs significant yield losses before and after harvest. Among management strategies, biological control is an environmentally safe and sustainable alternative to chemical control. In this study, we isolated and screened bacteria for antifungal activity against the basal rot pathogen F. oxysporum. Isolates 23-045, 23-046, 23-052, 23-055, and 23-056 significantly inhibited F. oxysporum mycelial growth and conidial germination. Isolates 23-045, 23-046, 23-052, and 23-056 suppressed the development of Fusarium basal rot in both onion seedlings and bulbs in pot and spray inoculation assays. Isolate 23-055 was effective in onion seedlings but exhibited weak inhibitory effect on onion bulbs. Based on analyses of the 16S rRNA and rpoB gene sequences together with morphological analysis, isolates 23-045, 23-046, 23-052, and 23-055 were identified as Bacillus thuringiensis, and isolate 23-056 as Bacillus toyonensis. All five bacterial isolates exhibited cellulolytic, proteolytic, and phosphate-solubilizing activity, which may contribute to their antagonistic activity against onion basal rot disease. Taken together B. thuringiensis 23-045, 23-046, 23-052, and 23-055 and B. toyonensis 23-056 have potential for the biological control of Fusarium basal rot in onion.

• 한국작물학회지
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• 제64권4호
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• pp.384-394
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• 2019

국내에서 육성된 파성3으로 분류된 밀의 생장에 대한 고온의 영향을 알아보기 위해 분얼기부터 등숙기까지 일평균 17℃, 20℃, 23℃, 26℃ 온도 처리에 의해 나타나는 밀의 생육 특성과 유전자 발현양의 변이를 분석하였다. 1. 밀의 생산성과 밀접한 연관이 있는 유효분얼수, 건물중은 수안밀과 조은밀은 일평균 온도 23℃ 이상에서 감소하였고, 진품밀은 20℃ 이상에서 감소하였다. 2. 진품밀의 경우 온도 처리 50일 후 온도 조건에 따라 생육상이 뚜렷이 구분되었는데, 17℃에서 영양생장 단계를 보였고, 20℃ 이상에서 출수·개화 단계를 나타냈다. 3. 온도와 관련된 생리대사에 관여한다고 알려진 유전자 16개를 대상으로 RT-qPCR을 진행하여 온도 처리 50일 후 진품밀의 17℃와 23℃ 처리구에서 유전자 발현 수준의 차이를 확인해본 결과, 23℃ 처리구에서 발현이 증가한 유전자에는 HSP70, HSP101, VRN2, ERF1, TAA1, YUCCA2, GolS, MYB73, Histone H2A이 있고, 감소한 유전자에는 VRN-A1, DREB2A, HsfA3, PIF4, PhyB, HSP17.6CII, rbcL이 있다. 4. 16개 유전자 중 MYB73, YUCCA2, HSP101, ERF1, VRNA1이 저온과 고온 조건 사이에서 유전자 발현양에 큰 차이를 보였다. 5. 온도에 의한 진품밀의 출수 표현형은 평균온도 17℃와 20℃ 사이에서 결정적으로 나타나는 것으로 보이며, 온도에 의한 생육상과 형태적 특성의 차이는 단일 유전자 발현이 아닌 고온 스트레스 반응과 관련된 여러 유전자의 복합적인 메커니즘에 의해 영향을 받을 것으로 생각된다.

• 한국작물학회:학술대회논문집
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• 한국작물학회 2017년도 9th Asian Crop Science Association conference
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• pp.104-104
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• 2017

Sorghum (Sorghum bicolor (L.) Moench.) is one of the most important crops for human and animal nutrition. Nonetheless, sorghum has a cyanogenic glucoside compound which can be degraded into hydrogen cyanide, toxic to humans and animals even with tiny amount. In consequence, breeding materials with a low cyanide level has been a top priority in sorghum breeding programs. To fulfill our long-term goal, we are screening sorghum accessions with low cyanide level, which would be an important breeding material for food safety. We collected seeds of various sorghum accessions and analyzed relevant metabolites to find useful breeding materials of sorghum accessions containing low cyanide. Fourteen wild relatives were obtained from the University of Georgia in US, a reference accession BTx623, and three local varieties from National Agrobiodiversity Center of Rural Development Administration in Korea, and one wild species from the Wild Plant Resources Seed Bank of Korea University in Korea. Sorghum plants were grown in plastic greenhouse under natural conditions. After growing, leaf samples were harvested at different developmental stages: seedling phase, vegetative phase (right before flowering), and reproductive phase (ripening). Using collected samples, quantification analysis were performed by an HPLC system for three metabolites (dhurrin, 4-hydroxybenzaldehyde, and 4-hydroxyphenylacetic acid) in sorghum plants. Prior to metabolome analysis, specific experimental condition for HPLC system was set to be able to separate three metabolites simultaneously. Under this condition, these metabolites were quantified in each accession by HPLC system. We observed that the metabolite contents were changed differently by developmental stages and accessions. We clustered these results into five groups as patterns of their contents by developmental stages. Most of accessions showed that 4-hydroxybenzaldehyde content was very high at seedling stage and decreased rapidly at vegetative phase. Interestingly, the patterns of dhurrin content were very different among clusters. However, 4-hydroxyphenylacetic acid content was maintained at low levels by developmental stages in most accessions. The results would demonstrate how dhurrin and alternative degradation pathways are differentiated in each accession.

• 한국육종학회지
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• 제42권5호
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• pp.515-524
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• 2010

본 연구에서는 RNAi 기작을 이용하여 식미에 중요한 영향을 미치는 아밀로스 함량을 다양화하기 위해 GBSSI 유전자의 3'-UTR 부위를 targeting하여 dsRNA를 생성시킬 수 있는 운반체를 제작하고, 벼에 형질전환 하였다. 작성된 형질전환체들을 대상으로 $I_2$-KI 용액 반응과 아밀로스 함량을 분석한 결과, $I_2$-KI 용액에 대한 반응은 waxy 타입으로 나타났으나 아밀로스 함량은 찰벼와 저아밀로스 벼 사이에 해당되는 범위를 보였다. 원품종과 형질전환체 간의 아밀로펙틴 사슬 분포의 차이를 비교한 결과, 단쇄에 해당되는 A1과 B1 사슬의 분포는 감소한 반면, 중쇄에 해당되는 B2와 장쇄인 B3 사슬의 분포는 다소 증가하였으며, B3 사슬의 분포비율은 사용된 품종에 따라 약간의 차이를 보였다. 배유 단면의 전자현미경적 구조를 비교한 결과, 원품종에 비해 형질전환체의 전분립 크기가 작아지고 쪼개짐의 형태가 완만한 굴곡을 보였다. 이러한 결과를 바탕으로, RNAi 기술을 이용하여 다양한 아밀로스 함량이 조절된 형질전환 벼를 개발하기 위해서는 targeting 부위를 결정하는 것이 하나의 중요한 전략이 될 수 있음을 확인하였다.

• 한국환경농학회지
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• 제37권3호
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• pp.229-234
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• 2018

In vitro 소핵시험(vitMNT)은 유전독성의 유망한 대체시험법 중 하나로, OECD에서 TG로 채택되어 화학물질의 등록에 사용되고 있다. 본 시험에서는 CHL cell을 사용한 vitMN test에서 소핵을 판별하기 위한 최적화된 세포질 조건을 찾고자 하였으며, 양성대조물질로 MMC와 Col을 사용하고 세포 염색을 위해 giemza 용액을 사용하였다. 시험결과, 세포현탁을 위해 사용되는 고정액의 acetic acid의 농도는 1%로 하는 것이 band의 두께와 세포질의 퍼짐성 측면에서 적당하였다. 또한 세포의 깨짐을 최소화하는 최종 고정액의 적하시간은 현탁 후 1~4시간이었다. 이러한 결과는 vitMNT에서 소핵관찰의 신속성, 용이성 및 정확성을 확보하는데 도움이 될 것이다.

• 한국토양비료학회지
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• 제49권1호
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• pp.7-11
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• 2016

Winter crops have been recognized as an alternative to soil management for fertility and crop productivity in paddy soil. Recently, rape has been produced at winter season and there is little research results on reduction of N fertilizer by adding rape residues for rice cultivation. In this study, we investigated the productivity and quality of rice by applying with 0, 27, 63, $90kg\;ha^{-1}$ of N fertilizer after input of rape residues into soil for two years. The highest yield of rice was average $4.68Mg\;ha^{-1}$ at the treatment applied with the $90kg\;N\;ha^{-1}$ with rape residue. It was reduced to N rate from 31.6 to $43.2kg\;N\;ha^{-1}$ in comparison to $4.53Mg\;ha^{-1}$ of maximum yield in treatment added $90kg\;N\;ha^{-1}$ with rape. Amylose content in rice was similar among treatments with/without rape residue, but protein content was lower in treatment with rape residue than in those without rape residue. In conclusion, input of rape residue in rice cultivation could be alternative to reduction of N fertilization and improvement of quality by adjusting rice productivity in paddy soil under cropping system.

• Molecules and Cells
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• 제27권4호
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• pp.467-473
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• 2009

Our previous study suggested that OsBWMK1, a gene which encodes a member of the rice MAP kinase family, generates transcript variants which show distinct expression patterns in response to environmental stresses. The transcript variants are generated by alternative splicing and by use of alternative promoters. To test whether the two alternative promoters, pOsBWMK1L (promoter for the OsBWMK1L splice variant) and pOsBWMK1S (promoter for the OsBWMK1S splice variant), are biologically functional, we analyzed transgenic plants expressing GUS fusion constructs for each promoter. Both pOsBWMK1L and pOsBWMK1S are biologically active, although the activity of pOsBWMK1S is lower than that of pOsBWMK1L. Histochemical analysis revealed that pOsBWMK1L is constitutively active in most tissues at various developmental stages in rice and Arabidopsis, whereas pOsBWMK1S activity is spatially and temporally restricted. Furthermore, the expression of pOsBWMK1S::GUS was upregulated in response to hydrogen peroxide, a plant defense signaling molecule, in both plant species. These results suggest that the differential expression of OsBWMK1 splice variants is the result of alternative promoter usage and, moreover, that the mechanisms controlling OsBWMK1 gene expression are conserved in both monocot and dicot plants.

• 한국초지조사료학회지
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• 제40권3호
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• pp.161-166
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• 2020

Barley is an important cereal gain which is traditionally used in some nations of Asia and North Africa, and there has been growing interest in using barley as an ingredient in food due to their nutritional value and high content of phyto-constituents. However, no study report on comparative feed value between sprouted barley, cornflake and alfalfa hay. Therefore, in this study we aimed to evaluate the chemical composition, amino acid profile and mineral content of 6 day sprouted barley fodder (SBF) compared with cornflake and alfalfa hay using by AOAC method, as an alternative feed ingredient. Results showed that SBF had higher content of crude protein, acid detergent insoluble crude proteins and neutral detergent insoluble crude protein than alfalfa hay and cornflake; cornflake had higher crude fiber, neutral detergent fiber content than SBF and alfalfa hay; alfalfa hay had higher crude fiber, crude ash, acid detergent fiber, neutral detergent fiber and lignin level than SBF and cornflake. Also, significant differences were found on amino acid content among them (p<0.01). The most abundant amino acid in SBF was glutamate (123 g/kg DM), which is higher than in alfalfa hay (1.27%) or cornflake (1.58%). However, methionine (1.33%) and cysteine (1.53%) were the least abundant amino acids in SBF compared with cornflake or alfalfa hay. Furthermore, our study results exhibited that SBE comprise a good sources of minerals including ferrous (90.01 mg/kg) followed by zinc (20.50 mg/kg), magnesium (0.20 mg/kg) and sodium (0.03 mg/kg) as compared to cornflake and alfalfa hay. The present research findings, confirmed that the nutritional values of SBF are comparable to those of cornflake and alfalfa hay. Hence, SBF can be a better alternative feed ingredient for cornflake or alfalfa hay. However, feeding trials will be required to determine acceptability of SBF for ruminant production.

• 한국작물학회지
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• 제67권1호
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• pp.41-52
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• 2022

1. 본 연구에서는 우리밀 품종인 금강밀과 염 저항성을 가지는 돌연변이 라인 2020-s1340을 재료로 200 mM 염 스트레스 처리에 따른 전사체 발현을 확인하였다. QuantSeq을 통해 23,634,438개의 reads가 생산되었고 7,331,269개의 reads가 mapping됐다. 2. 염 스트레스 상황에서 총 282개의 DEG가 확인이 되었고 이러한 DEGs는 UDP-glucosyltransferase, receptor kinase-like protein, Lectin receptor-like kinases, cytochrome P450등의 단백질들을 코딩하는 유전자들이다. 이러한 DEGs는 염 저항성과 관련된 후보 유전자들이 될 수 있다. 염 저항성과 관련하여 역할이 밝혀지지 않은 유전자들은 추후 연구를 통해 확인이 필요하다. 3. GO연구에서는 DEGs를 세가지 범주로 분류하였으며 대부분 식물체 내 세포 기초 경로와 관련된 GO term들이 주로 되었으며 각각 범주에 있어서 biological process, molecular process에서는 single-organism process (GO: 0044699), single-organism metabolic process (GO:0044710), oxidation-reduction process (GO:0055114), copper ion transport (GO:0006825), copper ion transmembrane transport (GO:0035434), alternative oxidase activity (GO:0009916) GO term들이 유의성이 높게 나타났다. 4. 이러한 QuantSeq의 분석결과는 밀에 관한 염에 의해 발현되는 전사 발현에 대한 이해를 향상시킬 수 있다. 또한 염 스트레스 반응의 복잡한 분자 메커니즘에 대한 좋은 통찰력을 제공하고 염분 스트레스에 대한 작물 내성의 유전적 개선을 위한 실질적인 토대를 마련할 수 있을 것이다.

• Asian-Australasian Journal of Animal Sciences
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• 제18권2호
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• pp.296-300
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• 2005

Human-induced soil salinity is becoming a major threat to agriculture across the world. This salinisation occurs in both irrigated and rain-fed agricultural zones with the highest proportions in the arid and semi-arid environments. Livestock can play an important role in the management and rehabilitation of this land. There are a range of plants that grow in saline soils and these have been used as animal feed. In many situations, animal production has been poor as a result of low edible biomass production, low nutritive value, depressed appetite, or a reduction in efficiency of energy use. Feeding systems are proposed that maximise the feeding value of plants growing on saline land and integrate their use with other feed resources available within mixed livestock and crop farming systems. Salt-tolerant pastures, particularly the chenopod shrubs, have moderate digestible energy and high crude protein. For this reason they represent a good supplement for poor quality pastures and crop residues. The use of salt-tolerant pasture systems not only provides feed for livestock but also may act as a bio-drain to lower saline water tables and improve the soil for growth of alternative less salt tolerant plants. In the longer term there are opportunities to identify and select more appropriate plants and animals for saline agriculture.