• 한국패류학회지
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• 제26권2호
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• pp.185-188
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• 2010

- 본 웹 데이터베이스 서버의 구축을 통해 Haliotis 속간의 염기서열과 일치하는 서열을 자체 BLAST 를 통해 매우 빠른 속도로 추출 할 수 있었다. - Repeat elements, E. coli, vector 등의 서열들과 동시에 BLAST를 시행할 수 있어 cDNA 또는 genomic DNA 라이브러리를 구축할 때 라이브러리의 오염, 삽입체의 길이 등의 상태를 쉽게 확인 할 수 있었다. - Clustering Res. 인터페이스를 통해 SNPs 발굴이 용이하게 되었으며 자체 구축된 primer3 를 통해 실험용 시발체를 제작할 수 있게 되었다 (Evans et al. 2001). - 이러한 SNP 데이터베이스 구축은 SNP 발굴 작업을 극대화 시킬 수 있어 차후 수행될 Haliotis 관련 분자육종 관련연구에 많은 도움이 될 것으로 기대된다.

• 한국자원식물학회지
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• 제21권5호
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• pp.388-394
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• 2008

Arabidopsis thaliana $Ca^{2+}/H^+$ 수송체 유전자인 CAX 1(cation exchanger 1)이 도입된 벼 형질전환체에 대한 연구결과를 요약하면 다음과 같다. Agrobacterium 이용 형질전환 CAX 1 벼 $T_5$ 세대를 대상으로 CAX 1밴드가 도입되었음을 확인하였다. 농업적인 특징인 수장, 수수 및 간장은 모품종(일품)과 유사하였으며, 종자의 칼슘 함량도 높았다. 미립의 크기와 천립중은 모품종보다 약간 크나 거의 일치하고, 저온저항성과 도열병에 대한 내병성이 나타났다. $T_5$ 세대에서 형질이 안정적으로 발현되면서 모품종과 유사하고 농업적 형질이 우수한 3 계통을 선발하였다. 앞으로 $T_6$ 세대에 대한 특성조사를 거쳐 $Ca^{2+}$ 함량이 안정적으로 높게 유지되는 계통을 선발하여 세대육성하면 칼슘과 관련된 유전자의 내재해성 작물의 기초자료 이용되어 질 수 있을 것으로 사료된다.

• Journal of Microbiology and Biotechnology
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• 제16권10호
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• pp.1529-1536
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• 2006

We cloned a gene of ompH(D:4) from pigs infected with P. multocida D:4 in Korea [16]. The gene is composed of 1,026 nucleotides coding 342 amino acids (aa) with a signal peptide of 20 aa (GenBank accession number AY603962). In this study, we analyzed the ability of the ompH(D:4) to induce protective immunity against a wild-type challenge in mice. To determine appropriate epitope(s) of the gene, one full and three different types of truncated genes of the ompH(D:4) were constructed by PCR using pET32a or pRSET B as vectors. They were named ompH(D:4)-F (1,026 bp [1-1026] encoding 342 aa), ompH(D:4)-t1 (693 bp [55-747] encoding 231 aa), ompH(D:4)-t2 (561 bp [187-747] encoding 187 aa), and ompH(D:4)-t3 (540 bp [487-1026] encoding 180 aa), respectively. The genes were successfully expressed in Escherichia coli BL21(DE3). Their gene products, polypeptides, OmpH(D:4)-F, -t1, -t2, and -t3, were purified individually using nickel-nitrilotriacetic acid (Ni-NTA) affinity column chromatography. Their $M_rs$ were determined to be 54.6, 29, 24, and 23.2 kDa, respectively, using SDS-PAGE. Antisera against the four kinds of polypeptides were generated in mice for protective immunity analyses. Some $50{\mu}g$ of the four kinds of polypeptides were individually provided intraperitoneally with mice (n=20) as immunogens. The titer of post-immunized antiserum revealed that it grew remarkably compared with pre-antiserum. The lethal dose of the wild-type pathogen was determined at $10{\mu}l$ of live P. multocida D:4 through direct intraperitoneal (IP) injection, into post-immune mice (n=5, three times). Some thirty days later, the lethal dose ($10{\mu}l$) of live pathogen was challenged into the immunized mouse groups [OmpH(D:4)-F, -t1, -t2, and -t3; n=20 each, two times] as well as positive and negative control groups. As compared within samples, the OmpH(D:4)-F-immunized groups showed lower immune ability than the OmpH(D:4)-t1, -t2, and -t3. The results show that the truncated-OmpH(D:4)-t1, -t2, and -t3 can be used for an effective vaccine candidate against swine atrophic rhinitis caused by pathogenic P. multocida (D:4) isolated in Korea.

• 식물병연구
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• 제18권2호
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• pp.93-100
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• 2012

농업유전자원센터에 보존하고 있는 896점의 고추(C. annuum 430점, C. baccatum 219점, C. chacoense 14점, C. frutescens 70점, C. pubescens 2점, 미동정 8점)에 C. acutatum을 접종 후 $28^{\circ}C$에서 14일간 배양 후 탄저병 발병 정도를 평가하였다. 무상처 분무 접종에서 총 49점이 C. acutatum에 저항성을 나타내었으며, 그 중 9점은 고도의 저항성을 나타내었다. 고도의 저항성을 나타내는 자원들은 C. baccatum 4점, C. chacoense 1점, C. frutescens 4점이었다. 무상처 분무 접종에서 탄저병 저항성을 나타내는 자원 중 42점을 상처 접종법으로 탄저병균을 접종하였다. 그 중 5점은 접종 5일 후에도 병반의 크기가 3%미만으로 나타나 저항성을 나타내었으며, 이들은 모두 C. baccatum이었다. 저항성을 보이는 5점은 탄저병 저항성 육성을 위한 자원으로 이용가능 할 것이다.

• 생명과학회지
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• 제18권4호
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• pp.435-440
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• 2008

RAPD 분석을 이용하여 지황 육성 계통과 지역 수집종 들을 구분할 수 있는 분자표지자를 선발하고, 집단 간, 집단 내 유전적 다양성을 평가하기 위하여 본 실험을 수행하였다. 총 20개의 임의 primer를 이용하여 PCR 한결과, 육성 계통과 수집종 들을 구별할 수 있는 OPA-1 등 10개의 재현성과 다형성이 좋은 프라이머 들을 선발하였다. 특히 OPA-10, OPA-11 및 OPA-19는 고려지황과 지황1호를 다른 계통 및 수집종 들과 구별할 수 있었으며, 이들 프라이머를 이용하여 0.9 kb, 1.2 kb, 1.3 kb 및 1.4 kb등의 육성계통 특이적인 DNA 밴드들을 확보할 수 있었다. 한편 이들의 결과를 토대로 통계처리에 의한 유전분석 결과, 고려지황, 지황1호 및 일본지황은 집단 내 유사도가 높아 다른 집단들과 구별되었다. 결론적으로, RAPD 분석을 통한 결과는 지황의 유전적 다양성 이해와 특정 계통을 다른 계통 및 수집종 들과 구분할 수 있는 방법으로 이용될 수 있다.

• Molecules and Cells
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• 제27권4호
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• pp.423-428
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• 2009

Superoxide dismutases (SODs) constitute the first line of cellular defense against oxidative stress in plants. SODs generally occur in three different forms with Cu/Zn, Fe, or Mn as prosthetic metals. We cloned the full-length cDNA of the Thellungiella halophila Cu/Zn-SOD gene ThCSD using degenerate RT-PCR and rapid amplification of cDNA ends (RACE). Sequence analysis indicated that the ThCSD gene (GenBank accession number EF405867) had an open reading frame of 456 bp. The deduced 152-amino acid polypeptide had a predicted molecular weight of 15.1 kDa, an estimated pI of 5.4, and a putative Cu/Zn-binding site. Recombinant ThCSD protein was expressed in Escherichia coli and assayed for SOD enzymatic activity in a native polyacrylamide gel. The SOD activity of ThCSD was inactivated by potassium cyanide and hydrogen peroxide but not by sodium azide, confirming that ThCSD is a Cu/Zn-SOD. Northern blotting demonstrated that ThCSD is expressed in roots, stems, and leaves. ThCSD mRNA levels increased by about 30-fold when plants were treated with sodium chloride (NaCl), abscisic acid (ABA), and indole-acetic acid (IAA) and by about 50-fold when treated with UVB light. These results indicate that ThCSD is involved in physiological pathways activated by a variety of environmental conditions.

• 한국육종학회지
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• 제41권4호
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• pp.369-376
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• 2009

Cowpea might have been introduced from China to Korea and cultivated for several hundred years but it has never been a staple food crop in Korea. In this study, genetic diversity of 492 Korean cowpea landrace accessions that have passport information was estimated using six SSR markers. The mean of Weir's gene diversity was 0.665 from all accessions investigated in the study. Cowpea gene diversity of six local provinces in Korea was ranged from 0.370 in accessions of Gangwon to 0.680 in Jeonra provinces. Low gene diversity of the cowpea genepool of Gangwon province was probably derived from relatively few introductions. Especially SSR markers VM36 and VM39 seem to be good markers to distinguish the Gangwon accessions from others by occurring at a specific locus with higher than 78% of allele frequency. Except for the Gangwon province with the low genetic diversity, gene diversity of cowpea accessions from other provinces was ranged from 0.600 to 0.680 indicating no big differences among provinces. Distribution pattern of the allele frequencies was similar among the other provinces. This may reveal that Korean farmers might exchange cowpea seeds easily with even their neighbors with geographical barriers. A core collection, 100 landraces, ca. 20% of base collection, was developed at the 70% of a similarity coefficient level using random sampling approaches after stratification of the entire landrace collection based on the phenetic dendrogram. The variability of SSR in the base and core collections of Korean cowpea landrace was compared by calculating Weir's gene diversity. The mean of Weir's gene diversity of the core was 0.707 while that of the base collection was 0.665. The higher diversity index in the core collection indicates that it maintains the initial variability and well represents the base collection. The core collection included one of determinate accession (IT 216155) and two of no branching type accessions (IT 103959 and IT 161024). The core collection could be used to guide more efficient management and utilization of the entire collection. This core collection should be revised periodically as additional accessions are collected and further characterization is conducted.

• 한국자원식물학회지
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• 제32권4호
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• pp.296-302
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• 2019

본 연구는 주요 배유전자원 43 accession을 대상으로 육종소재로 활용할 수 있는 배 유전자원 선발과 종내 또는 종간 5개 교배집단 609 seedling에서 배 검은별무늬병 저항성 발현을 확인하고자 수행하였다. P. pyrifolia, P. bretschneideri, P. ussuriensis는 검은별무늬병 병든 과실률이 각각 59.5, 73.4, 63.0%, P. pyrifolia와 P. bretschneideri 종간 교잡으로 얻어진 품종은 77.7%로 병든 과실률이 비교적 높았으나 P. communis, P. pyrifolia ${\times}$ P. communis종간교잡에 속하는 품종들은 15% 미만의 병든 과실률을 보였다. 검은별무늬병에 대한 저항성을 종별로 구분하여 Duncan 검정한 결과, P. bretschneideri, P. pyrifolia, P. ussuriensis, pyrifolia ${\times}$ P. bretschneideri 종이 P. communis, P. pyrifolia ${\times}$ P. communis두 개 종 그룹보다 검은별무늬병 병든 과실률이 유의하게 높았고 이러한 경향은 교배집단에서도 동일하였다. P. pyrifolia 종내 교배집단은 80% 이상의 검은별무늬병 감염률을 보인 반면, P. pyrifolia ${\times}$ P. communis의종간교배 집단은 2% 수준의 낮은 배 검은별무늬병 감염률을 보였다. P. pyrifolia 와 P. communis를 종간교배 하면 서양배의 저항성 인자가 우성으로 작용하여 그 후대에서 배 검은별무늬병에 강한 개체들이 대부분 얻어지기 때문에 P. communis는 배 검은별무늬병저항성 품종 육종소재로 적합하다.

• 한국자원식물학회:학술대회논문집
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• 한국자원식물학회 2019년도 춘계학술대회
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• pp.42-42
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• 2019

This study was carried out to build a database system for amylose and protein contents of rice germplasm based on NIRS (Near-Infrared Reflectance Spectroscopy) analysis data. The average waxy type amylose contents was 8.7% in landrace, variety and weed type, whereas 10.3% in breeding line. In common rice, the average amylose contents was 22.3% for landrace, 22.7% for variety, 23.6% for weed type and 24.2% for breeding line. Waxy type resources comprised of 5% of the total germplasm collections, whereas low, intermediate and high amylose content resources share 5.5%, 20.5% and 69.0% of total germplasm collections, respectively. The average percent of protein contents was 8.2 for landrace, 8.0 for variety, and 7.9 for weed type and breeding line. The average Variability Index Value was 0.62 in waxy rice, 0.80 in common rice, and 0.51 in protein contents. The accession ratio in arbitrary ranges of landrace was 0.45 in amylose contents ranging from 6.4 to 8.7%, and 0.26 in protein ranging from 7.3 to 8.2%. In the variety, it was 0.32 in amylose ranging from 20.1 to 22.7%, and 0.51 in protein ranging from 6.1 to 8.3%. And also, weed type was 0.67 in amylose ranging from 6.6 to 9.7%, and 0.33 in protein ranging from 7.0 to 7.9%, whereas, in breeding line it was 0.47 in amylose ranging from 10.0 to 12.0%, and 0.26 in protein ranging from 7.0 to 7.9%. These results could be helpful to build database programming system for germplasm management.

• 기록학연구
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• 제11호
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• pp.215-254
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• 2005

This thesis aims to study the founding process and operation of the prefectural archives of Japan and to put that knowledge to the founding regional archives in Korea. Now 28 among 47 Prefectural Governments in Japan have founded and operated the prefectural archives. While Kyoto Prefectural Library and Archives, Nagano Prefectural Museum of History, Gifu Prefectural Virtual Museum of History, The Archives of Hyogo Prefectural Government, Ibaraki Prefectural Museum of History and Hukushima Prefectural Archives are on the type of Prefectural Museum of History, the rest of them are on the type of Archives. The Prefectural Museum of History in Japan has a complex function as the museum, the library, and the archives. But the Prefectural Museum of History seems to be a sort of transient phenomenon to Archives. The reason which Prefectural Museum of History can not develop into the Archives is not so much owing to financial difficulties as lack of understanding on the function of Archives. The thesis shows founding process of each prefectural archives. Especially, the case study on the Kanagawa Prefectural Archives, Okinawa Prefectural Archives was arranged by the detailed data investigation. Comparing with other prefectures, these three prefectural archives have a system in the collection and arrangement process of current official records, paleography and many other materials, and construct records management system with institutionalizing accession, arrangement, and opening of official records by regulations, rules and so forth. But because of historical background and character in each region, the difference may exist in the founding process of three prefectural archives. Before central archival institution, National Archives of Japan, is founded, the prefectural archives have been founded at each region and they have gained relatively independent status so that decentralism in the system of managing records could be possible. And the private historical organizations had many influences on the founding process of National Archives of Japan. Of course the Japanese Archives system may have many differences from Korean regional archives. While Japan established Archives institute for itself with localism, Korea has not settled the system of self-government still. Moreover, financial difficulties on founding regional archives and lack of understanding of the Archives remained in Korea. And yet with regard to the founding regional archives in Korea, the case of operation and founding process of prefectural archives of Japan may be of great value.