• Title/Summary/Keyword: 2b-site

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A Mossbauer Study on Al-Ferrite (Al-Ferrite의 Mossbauer 분광학적 연구)

  • 이충섭;주한식;이찬영;서정철
    • Journal of the Korean Magnetics Society
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    • v.8 no.4
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    • pp.198-202
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    • 1998
  • We have studied $Al_xFe_{3-x}O_4$ produced by direct composition method using X-ray diffraction and Mssbauer spectroscopy. The cation distribution for $Al_xFe_{3-x}O_4$ was determined by the ratio of sub-spectra absorption area. The charge state of Fe atoms in octahedral site(B-site) is $Fe^{2.5+}$ based on electron hopping, $Fe^{2+}$$(Fe^{3+},Al^{3+})$ without dependency of substituted Al amounts.

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Evaluation of reaction site prediction in 3-ring PAHs according to calculation level

  • Lee, Byung-Dae
    • Journal of the Korean Applied Science and Technology
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    • v.39 no.4
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    • pp.535-541
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    • 2022
  • The radical reaction position was calculated by varying the calculation level for ACEL and ANT, which are detected with the highest frequency and concentration in PAHs pollution sites. The results of each calculation level were compared and evaluated with the existing literature. HF, B3LYP, B3LYP-D, and MP2 were used as the method for each level used for calculation. Except for HF, the MK charge by B3LYP, B3LYP-D, and MP2 was consistent with the experimental results. It was found that the dispersion effect was negligible in the calculation of ACEL and ANT because the calculation results by the B3LYP and B3LYP-D methods were the same. In particular, it was found that the MK charge calculation result by MP2 agrees well with the product/PAH ratio obtained as a result of the experiment. Considering the calculation cost, it would be preferable to use B3LYP to predict the radical reaction site of ACEL and ANT. However, considering the product/PAH ratio, it takes more time to calculate, but it is judged that it is better to use the MP2.

Estimation of Pollution Sources of Oenam Watershed in Juam Lake using Nitrogen Concentration and Isotope Analysis (주암호 외남천 유역 하천수의 질소농도와 동위원소비 분석을 이용한 오염원 평가)

  • Choi, Yujin;Jung, Jaewoon;Choi, Woojung;Yoon, Kwangsik;Choi, Dongho;Lim, Sangsun;Jeong, Juhong;Lim, Byungjin;Chang, Namik
    • Journal of Korean Society on Water Environment
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    • v.27 no.4
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    • pp.467-474
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    • 2011
  • In an effort to investigate water pollution characteristics of Juam lake, water samples were collected from three sites (Sites A, B, and C) of Oenam stream which is a typical tributary of rural watershed in the lake and analyzed for N concentration and the corresponding isotope ratio (${\delta}^{15}N$) of ${NO_3}^-$. Concentrations of ${NO_3}^-$ were not dramatically different among the sites; $0.8{\pm}0.2mgNL^{-1}$ (range: $0.0{\sim}4.3mgNL^{-1}$) for Site A, $1.1{\pm}0.2mgNL^{-1}$ ($0.0{\sim}4.3mgNL^{-1}$) for Site B, and $1.1{\pm}0.1mgNL^{-1}$ ($0.1{\sim}2.6mgNL^{-1}$) for Site C. Meanwhile, ${\delta}^{15}N$ tended to decrease with river flow; it was highest for Site A ($45.5{\pm}5.3$‰) followed by Site B ($19.7{\pm}2.0$‰) and Site C ($8.7{\pm}1.5$‰). Such high ${\delta}^{15}N$ values of ${NO_3}^-$ in Site A suggested that ${NO_3}^-$ derived from livestock feedlot (specifically livestock excrete of which ${\delta}^{15}N$ is higher than 10‰) is the predominant pollution sources despite mountainous area occupied the most of land-use in the watershed. Using the two-sources isotope mixing model, it was estimated that the contribution of cropping activities (i.e. fertilization) became greater in down-stream area (Sites B and C) due to the higher agricultural land-use than the up-stream area (Site A). Particularly, during the active cropping season, the low contribution of organic pollution sources indicated that domestic sewage was not the predominant pollution source. Therefore, it was suggested that agricultural sources such as livestock farming and cropping rather than mountainous and residential are the dominant sources of water pollution in the study area. These results could be effectively utilized in elucidating water pollution sources in rural areas and selecting water management practices.

Microwave Dielectric Properties of (Pb0.4Ca0.6)[(Fe1/2Nb1/2)1-x(Mg1/3Nb2/3)x]O3 Ceramics

  • Kim, Eung-Soo;Han, Ki-Moon;Kim, Jong-Hee;Yoon, Ki-Hyun
    • Journal of the Korean Ceramic Society
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    • v.40 no.4
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    • pp.323-327
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    • 2003
  • Microwave dielectric properties of (P $b_{0.4}$C $a_{0.6}$)[($Fe_{\frac{1}{2}}$N $b_{\frac{1}{2}}$)$_{1-x}$ (M $g_{1}$ 3/N $b_{2}$ 3/)x] $O_3$ (PCFMN) ceramics were investigated as a function of (M $g_{1}$ 3/N $b_{2}$ 3/)$^{4+}$ content (0.1$\leq$x$\leq$0.8). A single perovskite phase with the cubic structure was obtained through the given composition range. The unit cell volume was increased with (M $g_{1}$ 3/N $b_{2}$ 3/)$^{4+}$, due to the larger average ionic size of (M $g_{1}$ 3/N $b_{2}$ 3/)$^{4+}$ than that of ($Fe_{\frac{1}{2}}$N $b_{\frac{1}{2}}$)$^{4+}$ for B-site ion. Dielectric constant (K) and Temperature Coefficient of Resonant Frequency(TCF) of PCFMN ceramics were dependent on (M $g_{1}$ 3/N $b_{2}$ 3/)$^{4+}$ content due to the decrease of ionic polarizability and B-site bond valence, respectively. Qf value was decreased with (M $g_{1}$ 3/N $b_{2}$ 3/)$^{4+}$ content due to the decrease of grain size. Typically, K of 73.56, Qf of 5,074 GHz and TCF of -6.45 ppm/$^{\circ}C$ were obtained for the specimens with x=0.4 sintered at 125$0^{\circ}C$ for 3 h.125$0^{\circ}C$ for 3 h.

SNR and ADC Changes at Increasing b Values among Patients with Lumbar Vertebral Compression Fracture on 1.5T MR Diffusion Weighted Images (1.5T MR 기기를 이용한 확산강조영상에서 b Value의 증가에 따른 요추압박골절 환자의 신호대 잡음비와 현성 확산 계수의 변화)

  • Cho, Jae-Hwan;Park, Cheol-Soo;Lee, Sun-Yeob;Kim, Bo-Hui
    • Progress in Medical Physics
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    • v.21 no.1
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    • pp.52-59
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    • 2010
  • To examine among patients with vertebral compression fracture the extent to which signal-to-noise ratio (SNR) and Apparent Diffusion Coefficient (ADC) values at the lumbar vertebral compression fracture site vary on diffusion-weighted MR images according to varying b values on the 1.5T MR device. Diffusion-weighted MR images of 30 patients with compression fracture due to chronic osteoporosis who underwent vertebral MRI from Jan. 2008 to Nov. 2009 were respectively obtained using a 1.5-T MR scanner with the b values increased from 400, 600, 800, 1,000 to $1,200\;s/mm^2$. For diffusion-weighted MR images with different b values, the signal-to-noise ratio (SNR) was assessed at three sites: the site of compression fracture of the lumbar vertebral body at L1 to L5, and both the upper and lower discs of the said fracture site, while for ADC map images with different b values, the SNR and ADC were respectively assessed at those three sites. As a quantitative analysis, diffusion-weighted MR images and ADC map images with b value of $400\;s/mm^2$ (the base b values) were respectively compared with the corresponding images with each different b value. As far as qualitative analysis is concerned, for both diffusion-weighted MR and ADC map images with b value of $400\;s/mm^2$, the extent to which signal intensity values obtained at the site of compression fracture of the lumbar vertebral body at L1 to L5 vary according to the increasing b values were examined. The quantitative analysis found that for both diffusion-weighted MR and ADC map images, as the b values increased, the SNR were relatively lowered at all the three sites, compared to the base b value. Also, it was found that as the b values increased, ADC valueswere relatively lowered at all the three sites on ADC map images. On the other hand, the qualitative analysis found that as the b values increased to more than $400\;s/mm^2$, the signal intensity gradually decreased at all the sites, while at the levels of more than $1,000\;s/mm^2$, severe image noises appeared at all of the three sites. In addition, higher signal intensity was found at the site of compression fracture of the lumbar vertebral body than at the discs. Findings showed that with the b value being increased, both the signal-to-noise ratio (SNR) and Apparent Diffusion Coefficient (ADC) values gradually decreased at all the sites of the lumbar vertebral compression fracture and both the upper and lower discs of the fracture site, suggesting that there is a possibility of a wider range of applications to assessment of various vertebral pathologies by utilizing multi b values in the diffusion-weighted MRI examination.

Structure and $Ca^{2+}$-ion effects on the function of $\alpha$-cyclodextrin Glucanotransferase from B. macerans : An X-ray study (Bacillus macerans에서 정제한 $\alpha$-cyclooextrin glucanotransferase의 구조와 칼슘이온이 기능에 미치는 영향 : X-ray 연구)

  • 최희욱;홍순강
    • KSBB Journal
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    • v.19 no.2
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    • pp.159-163
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    • 2004
  • The X-ray structure of the cydodextrin-glucanotransferase of Bacillus macerans was solved by molecular replacement at 2.0 ${\AA}$ resolution. The refined structure has a crystallographic R-factor of 16.6%, (R$\sub$free/ = 20.5%). A new metal binding site occupied by two Ca$\^$2+/-ions was found at an accession channel of the active site. There is a large accumulation of negative charges that bind these Ca$\^$2+/-ions, thereby connecting segment ${\beta}$13-${\alpha}$G (residue 254-276) to the main body of domain A (at ${\alpha}$H, residue 283-297). The segment 313-${\alpha}$G contains the catalytic residue Glu258 between subsite 1 and -1 and Tyr260 (subsite 2) which is located at the entrance of the active site. The Ca$\^$2+/-site 3a,b may have a major role for the activity and specificity of this CGTase, although it is not even conserved for the a-subclass of CGTases.

Genetic Variation and Species Identification of Thai Boesenbergia (Zingiberaceae) Analyzed by Chloroplast DNA Polymorphism

  • Techaprasan, Jiranan;Ngamriabsakul, Chatchai;Klinbunga, Sirawut;Chusacultanachai, Sudsanguan;Jenjittikul, Thaya
    • BMB Reports
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    • v.39 no.4
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    • pp.361-370
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    • 2006
  • Genetic variation and molecular phylogeny of 22 taxa representing 14 extant species and 3 unidentified taxa of Boesenbergia in Thailand and four outgroup species (Cornukaempferia aurantiflora, Hedychium biflorum, Kaempferia parviflora, and Scaphochlamys rubescens) were examined by sequencing of 3 chloroplast (cp) DNA regions (matK, psbA-trnH and petA-psbJ). Low interspecific genetic divergence (0.25-1.74%) were observed in these investigated taxa. The 50% majority-rule consensus tree constructed from combined chloroplast DNA sequences allocated Boesenbergia in this study into 3 different groups. Using psbA-1F/psbA-3R primers, an insertion of 491 bp was observed in B. petiolata. Restriction analysis of the amplicon (380-410 bp) from the remaining species with Rsa I further differentiated Boesenbergia to 2 groupings; I (B. basispicata, B. longiflora, B. longipes, B. plicata, B. pulcherrima, B. tenuispicata, B. thorelii, B. xiphostachya, Boesenbergia sp.1 and Boesenbergia sp.3; phylogenetic clade A) that possesses a Rsa I restriction site and II (B. curtisii, B. regalis, B. rotunda and Boesenbergia sp.2; phylogenetic clade B and B. siamensis; phylogenetic clade C) that lacks a restriction site of Rsa I. Single nucleotide polymorphism (SNP) and indels found can be unambiguously applied to authenticate specie-origin of all investigated samples and revealed that Boesenbergia sp.1, Boesenbergia sp.2 and B. pulcherrima (Mahidol University, Kanchanaburi), B. cf. pulcherrima1 (Prachuap Khiri Khan) and B. cf. pulcherrima2 (Thong Pha Phum, Kanchanaburi) are B. plicata, B. rotunda and B. pulcherrima, respectively. In addition, molecular data also suggested that Boesenbergia sp.3 should be further differentiated from B. longiflora and regarded as a newly unidentified Boesenbergia species.

Estimation of Site Productivity of Pinus densiflora by the Soil Physico-chemical Properties (토양의 물리화학적 성질에 의한 소나무림 임지생산력 추정)

  • Park, Nam-Chang;Lee, Kwang-Soo;Jung, Su-Young
    • Korean Journal of Soil Science and Fertilizer
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    • v.42 no.3
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    • pp.160-166
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    • 2009
  • We estimated site productivity for unstocked land based on the relationship between site index (i.e., average height of dominant trees at fixed age) and soil physico-chemical properties of Pinus densiflora stands. Site index relates to a direct method of determining a tree's response to a specific environment such as forest soil and climate conditions. We selected 78 sites in 22 P. densiflora stands of central temperate forest zone, and sampled soils for physicochemical analyzing. And 13 properties of soils were statistically treated by stepwise regression. In the degree of contribution of the variables to site index, the highly effective variables in A horizon were OM, clay content, sand content, available $P_2O_5$, and Exch. $Ca^{{+}{+}}$ inorder, and in B horizon T.N., O.M., Soil pH, cation exchange capacity(C.E.C.), and sand content in order. In both A and B horizon of the soil for P. densiflora stands, the variables commonly contributed to the site index were sand content and OM. These results may be useful to provide not only important criteria for establishment of Pinus densiflora stand sespecially in unstocked land but also aguidance for reforestation.

Conjugal Transfer of Plasmid DNA from Escherichia coli to Streptomyces lavendulae RFI-5

  • KITANI, SHIGERU;BIBB, MERVYN J.;NIHIRA, TAKUYA;YAMADA, YASUHIRO
    • Journal of Microbiology and Biotechnology
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    • v.10 no.4
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    • pp.535-538
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    • 2000
  • Streptomyces lavendulae FRI-5 produces the ${\gamma}$-butyrolactone autoregulator IM-2, which is required for nucleoside antibiotic producetion. We have developed a system for introducing DNA into S. lavendule FRI-5 via conjugal transfer from Esherichia cole. Conditions were established for conjugation of the oriT-and attP-containing plasmid pSET152 from E. coli ET12567 (pUZ8002) to FRI-5. Conjugation resulted in integration of the plasmid at the chromosomal C31 attB site. The frequency of intergeneric conjugation varied with the medium used. The highest frequency ($1.6\times10-5$ per recipient) was obtained on ISP medium 2 containing 10mM MgCl2. Southern blot and phenotypic analyses of exconjugants revealed that S. lavendulae FRI-5 contains a unique C31 attB site, and that integration of heterologous DNA into the attB site did not interfere with morphological differentiation or IM-2-dependent signal transduction, including the production of a blue pigment. This system will now enable detailed genetic analysis of the regulation of antibiotic production in S. lavendulae FRI-5.

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4-Hydroxy-6-Oxo-6,7-Dihydro-Thieno[2,3-b] Pyrimidine Derivatives : Synthesis and Their Biological Evaluation for the Glycine Site Acting on the N-Methyl-D-Aspartate (NMDA) Receptor

  • Hwang, Ki-Jun;Lee, Tae-Suk;Kim, Ki-Won;Kim, Beam-Tae;Lee, Chul-Min;Park, Eun-Young;Woo, Ran-Sook
    • Archives of Pharmacal Research
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    • v.24 no.4
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    • pp.270-275
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    • 2001
  • Bioisostere approach has been shown to be useful to augment potency or to modify certain physiological properties of a lead compound. Based upon well documented bioisosterism, an isosteric replacement of benzene ring of 4-hydroxy-2-quinolone compound (L-695902) with a thiophene moiety was carried out to prepare the title compounds, 4-hydroxy-6-oxo-6,7-dihydro-thieno[2,3-b] pyrimidines 15. The resulting bioisosteric compounds 15 were evaluated for their antagonistic activity (birding assay) for NMDA receptor glycine site.

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