• Title/Summary/Keyword: 형태적 유연관계

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Development of EST-SSR Markers and Analysis of Genetic Diversity Using Persimmon (Diospyros kaki Thunb) Cultivars Collecting from Domestic (국내 수집 감 품종을 이용한 EST-SSR marker 개발과 유전적 다양성 분석)

  • Seo, Dong Hywi;Jung, Kyung Mi;Kim, Se Jong;Kim, Kyung-Min
    • Korean Journal of Plant Resources
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    • v.26 no.4
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    • pp.491-502
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    • 2013
  • Persimmon (Diospyros kaki Thunb) fruit is one of the most important fruit and have been cultivated from ancient times in Korea. In this study, we found 16 EST-SSR markers that contained one or more EST-SSR sites from 246 cDNA sequences. The developing of EST-SSR marker analysis from 42 persimmon cultivars was compared by genetic relationships and morphological relationships using 6 qualitative traits (fruit related 6 traits) and 19 quantitative traits (flower related 19 traits). In this study, 25 primer sets were tested to identify PCR polymorphism and 14 potential EST-SSR primer pairs were selected. The result of morphological relationship EST-SSR marker analysis showed that the coefficient 0.02 was difficult to categorize in several groups. And then, coefficient 0.77 of genetic relationship showed that the group was classified as four groups. The result of correlation distance between genetic relationship and morphological relationship were investigated was low significance (-0.03). Our results also provided an optimized method for improvement of breeding efficiency and introduce of superior character at persimmon cultivars using EST-SSR markers which was useful for further investigation.

Genetic and Morphological Relationship among Korean Hylotelephium Species(Crassulaceae) (한국산 꿩의비름속(돌나물과) 식물의 유전적, 형태적 유연관계)

  • Lee, Seung-Hoon;Park, Ki-Ryung
    • Korean Journal of Plant Taxonomy
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    • v.36 no.4
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    • pp.293-308
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    • 2006
  • Genetic and morphological studies using morphological and isozymic data from 20 populations of 6 Korea Hylotelephium were conducted to resolve the species relationships and the origin of polyploid species. The results of morphological studies suggest that triploid H. viviparum is closely related to H. verticillatum, and the high frequency alleles of two species were very similar each other in isozyme analyses. Unique fixation of $PGI-1^b$ in two species supports that H. verticillatum should be the diploid ancestor of H. viviparum. However, a unique $ALD-1^c$ allele is present in H. viviparum, and the lack of the common alleles of H. erythrostictum and H. spectabile in this species eliminated them from the candidates of another tetraploid ancestor of H. viviparum. Based on the high morphological and genetic similarities, our results supported that the Korea endemic H. viridescens might be originated from the H. erythrostictum or share a common ancestor with it. Besides, H. ussuriense is closely related with H. erythrostictum and H. viridescens.

Studies on the Intraspecific Variations on Geological Distributions of Acusta despecta sieboldiana in Korea (한국산 달팽이 ( Acusta despecta sieboldiana) 의 지리적 분포에 따른 종내 변이에 관한 연구)

  • 이준상;권오길
    • The Korean Journal of Malacology
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    • v.12 no.1
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    • pp.19-31
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    • 1996
  • 국내 11개 지역(경기도 옹진군 덕적도, 경기도 의정부시 소요산, 강원도 춘천시, 충청남도 태안군 안홍, 경상북도 울릉군 울릉도, 전라북도 부안군 변산, 전라남도 신안군 홍도, 흑산도 비금도, 진도, 제주도)에서 채집된 달팽이 (A. despecta sieboleiana)를 대상으로 외부형태 분석과 동위효소를 검출하여 각 지역 집단간의 형태적, 유전적 유연관계와 변이 정도를 연구한 결과는 다음과 같다. 외부형태에 의한 집단간 유연관계는 안홍과 덕적도집단(average taxonomic distance, D=0.358)이 형태적으로 가장 유사한 집단으로 나타났다. Polyacrylamide gel을 사용하여 11가지의 동위효소를 검출한 결과 AKP, ACP, AO, EST, GPD, HBDH, LDH, SDH, XDH의 동위효소에서 유전적 다형현상이 나타났다. 전 집단의 평균 다형형의 빈도는 59.19%이며 이형접합자 빈도는 0.263이고 각 집단의 유전적 차이치는 춘천과 울릉도 집단이 0.066(genetic distance)으로 가장 높은 유사성을 보였다. 지리적 분포에 따른 외부형태 변이와 유전적 변이와의 관계는 유의성이 없었다.

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Analysis of Morphological and Genetic Relationships amomg Isolates of the Artificially Cultivated Mushroom, Hypsizygusmarmoreus (느티만가닥버섯 균주의 형태 및 유전적 유연관계 분석)

  • Kim, Min-Kyung
    • The Korean Journal of Mycology
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    • v.48 no.3
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    • pp.313-323
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    • 2020
  • To investigate the morphological characteristics and genetic relationships among isolate of the artificially cultivated mushroom Hypsizygus marmoreus, 111 isolates were collected from Korea and other countries. Random amplified polymorphic DNA polymerase chain reaction (RAPD-PCR) and ITS rDNA sequencing were used to confirm the genetic relationships among the collected H. marmoreus isolates. As a result of RAPD analysis using universal rice primer (URP)-PCR, all isolates of H. marmoreus clustered into three groups, which showed high sequence similarity (>90%). In addition, isolates with morphological and geographical differences formed independent clusters. However, it was impossible to distinguish between brown and white strains. Sixteen strains showing morphological and geographic differences were selected, and their ITS region sequences (640 bp) were aligned and compared. The ITS region sequences belonging to these isolates showed 94.8-99.1% similarities to those of publicly available H. marmoreus strains in GenBank. In conclusion, there were differences among isolates in terms of morphology and the area from which they were collected, but all the isolates used in the experiment were classified as H. marmoreus.

Morphological Relationship between Drosophila melanogaster, D. simulans and their Hybrids (Drosophila melanogaster와 D. simulans 및 그들간 잡종의 형태학적 유연관계)

  • 최영현;유미애;이원호
    • Korean journal of applied entomology
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    • v.32 no.2
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    • pp.193-199
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    • 1993
  • The morphological relationship between Drosophila melanogaster and D. simulans, and their hybrids were investigated using comparisons of internal reproductive organs. male sex comb tooth number and male genital discs. InterspecIfic hybrids of all crosses were completely sterile, and had rudImentary gonads. Dysgenic ovaries and testes were morphologically similar to those of gonadal dysgenesis stenlity associated with the PM system in D. melal1ogaster. The mean number of sex comb tooth in D. melrmogaster, D. simulans and their male hybrids were 10.73, 8.35 and 9.97, respectively. The general aspects of the genital disc of the malo hybrid were a mosaic-like structure between D. melanogaster and D. simulans.

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Analysis of Genetic Relation among Collected Landraces of Agrimonsa pilosa L. Using RAPD (RAPD를 이용한 짚신나물(Agrimonia pilosa Ledeb.) 수집종 유연관계 분석)

  • 이용호;최주호;정대수
    • Korean Journal of Plant Resources
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    • v.15 no.3
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    • pp.250-259
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    • 2002
  • Agromonia pilosa Ledeb. has been used as a medicinal plant in traditional folk remedy. There are few reports on classification, physiology, ecology and morphological studies of Agromonia pilosa L. in Korea. Therefore, advanced approaches on study and development with this plant would be done urgently. Present stndy was carried out to gain basic information on genetic resources and variation with collected domestic landraces through RAPD analysis in Agromonia pilosa L. Forty two collections of Agromonia pilosa L. from nation-wide area including USA one were analyzed by RAPD test. Molecular marker size by amplified DNA band pattern ranged from 300 to 2,100bp. Among the collection, two landraces of Hadong and Cheonghak-dong showed close relation in genetic similarity. Minimum and maximum value by matrix of 1-F among 26 collected landraces were figured out as 0.365 and 0.827 showing mean value for 0.624, respectively. Those landraces were classified into two groups with cluster analysis by Nei and Li's formula from RAPD-analyzed values, and considerable genetic differences were recognized between two groups.

Analysis of Genetic Relationship Among Collected Cymbidium goeringii Based on RAPD (RAPD를 이용한 춘란 수집종 20 품종의 유연관계 분석)

  • Kim, Tae Bok;Lee, Jin Jae;Song, Young Ju;Choi, Chang Hak;Cheong, Dong Chun;Yu, Young Jin
    • FLOWER RESEARCH JOURNAL
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    • v.19 no.4
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    • pp.225-230
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    • 2011
  • This research was performed for making data-base of cross-breeding between Cymbidium goeringii cultivars. Morphological characteristics were investigated and then genetic relationship was analyzed. Collected 20 Cymbidium goeringii cultivars were clustered into 2 groups. Seven cultivars were clustered into group I, and thirteen cultivars were clustered into group II. Group I doesn't have leaf pattern. Group have leaf pattern. The genetic relationship among collected 20 Cymbidium goeringii cultivars was anaylzed using RAPD with ten 10-mers random primer. Eighty-nine bands were generated by RAPD. Among the rest, three bands were monomorphic and eight-six bands were polymorphic. Overall similarity degree ranged from 0.521 to 0.862. The result of RAPD analysis was clustered into 2 groups, too. Sixteen cultivars were clustered into GroupX, and four cultivars were clustered into GroupY. Result of classification with morphological characteristics and RAPD showed different pattern, but 4 cultivars of GroupY by RAPD analysis were included in groupby morphological characteristics. Crossbreeding combination among low related coltivars in RAPD analysis may get more efficient result.

Seed Morphology of Euphorbia Section Anthacantha (Euphorbiaceae) and Related Taxa (대극속 Anthacantha절(대극과)과 근연분류군의 종자형태)

  • Na, Hee-Jung;Park, Ki-Ryong
    • Applied Microscopy
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    • v.40 no.4
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    • pp.219-228
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    • 2010
  • The seeds of 16 species from sect. Anthacantha and related taxa were examined using light and scanning electron microscopy to illucidate the boundary of the section and their relationship among species. Using six qualitative characters clustering analyses were conducted, and three types were recognized. Type I including species from sect. Anthacantha+sect. Meleuphorbia is characterized by the ovate shape, rounded at base and smooth along the ventral line. Type II including species from sect. Medusae+sect. Treisia-1 is squared in shape and are tuberculate. Tubercles are prominent along the ventral line. Type III (sect. Treisia-2 group) is mostly rounded, and as in type II, tubercles are prominent along the ventral line, but the unique crestae consisting of the grouping testa cells differed from the surface patterns of Types I and II. Based on the seed morphology, sects. Anthacantha and Meleuphorbia are closely related, which is well supported by the results from molecular and pollen morphological studies. Besides, sects. Treisia and Medusae are not closely related in terms of seed characters, and this is not consistent with the results of recent molecular studies.

Phylogenetic Relationships of Morus Species on the Basis of RAPD (RAPD를 이용한 뽕나무속 식물의 유전적 유연관계 분석)

  • 성규병;남학우;구태원
    • Journal of Sericultural and Entomological Science
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    • v.44 no.2
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    • pp.59-63
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    • 2002
  • Phylogenetic relationships among mulberry varieties (Morus species) were analyzed on the basis of RAPD in order to identify the possibility of classification for the species. Polymorphisms under RAPD method were compared among 41 mulberry varieties. From the results of RAPD for 41 mulberry varieties by use of 30 different primers, 151 polymorphic bands were formed out of 201 ones. Under the dendrogram based on cluster analysis with the polymorphic bands, the varieties were classified into 7 groups including two large and five small ones on 0.747 value of genetic similarity coefficient. In the large groups 19 and 16 varieties were belong to group I and III, respectively. On the other hand, relatively high genetic similarity was shown among the varieties belonging to the group I, II and III. While, relatively low similarity were done between them in the group IV-Ⅵ and the other groups, and Mohusang in the group Ⅶ showed the lowest phylogenetic relationship with the other varieties.

Phylogenetic Relationship of the Five Korean Veneridae clams, Bivalvia, Veneroida According to Morphological Characters (형태적 특징에 따른 한국산 백합과 5종의 계통유연관계)

  • Jung, Hyung-Taek;Kim, Jung;Choi, Sang-Duk
    • Journal of Aquaculture
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    • v.17 no.3
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    • pp.197-208
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    • 2004
  • Five commercially valuable Korean Veneroid, Protothaca jedoensis, Ruditapes philippinarum, Saxidomus purpuratus, Cyclina sinensis and Meretrix lusoria were recognized by comparing internal and external morphological characters. As length of the primary tooth was directly grown proportional to shell size but all other characters were not measured according to size of shell. Hence, the morphological characters of these Veneroids may be estimated from the size of the unique primary tooth and it might be enough to be a good criterion for identification of species among Veneriods. Numerical index of hinge plate length of these species was assessed systematically, irrespective of measuring the length, height and width of the shell. The highest internal and external morphological similarity was observed between P. jedoensis and R. philippinarum and the lowest similarity was observed between P. jedoensis and M. lusoria. These similarities may be affected by multiple environmental factors as well as genetic characters. For artificial seed production of P. jedoensis, R. philppinarum, a closest relative among the five species, must be focussed.