• Title/Summary/Keyword: 해양 유전

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Development of Enhanced Data Mining System for the knowledge Management in Shipbuilding (조선기술지식 관리를 위한 개선된 데이터 마이닝 시스템 개발)

  • Lee, Kyung-Ho;Yang, Young-Soon;Oh, June;Park, Jong-Hoon
    • Proceedings of the Korea Committee for Ocean Resources and Engineering Conference
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    • 2006.11a
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    • pp.298-302
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    • 2006
  • As the age of information technology is coming, companies stress the need of knowledge management. Companies construct ERP system including knowledge management. But, it is not easy to formalize knowledge in organization. we focused on data mining system by using genetic programming. But, we don't have enough data to perform the learning process of genetic programming. We have to reduce input parameter(s) or increase number of learning or training data. In order to do this, the enhanced data mining system by using GP combined with SOM(Self organizing map) is adopted in this paper. We can reduce the number of learning data by adopting SOM.

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Structural Health Monitoring of Harbor Caisson-type Structures using Harmony Search Method (최적화 화음탐색법을 이용한 항만 케이슨 구조물의 구조건전성 평가)

  • Lee, So-Young;Kim, Jeong-Tae;Yi, Jin-Hak;Kang, Yoon-Koo
    • Journal of Ocean Engineering and Technology
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    • v.23 no.1
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    • pp.122-128
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    • 2009
  • In this study, damage detection method using harmony search method and frequency response is proposed. In order to verify this method, the following approaches are implemented. Firstly, damage detection method using harmony search was developed. To detect damage, objective functions that minimize difference with natural frequency and modal strain energy from undamaged and damaged model are used. Secondly, efficiency of developed damage detection method was verified by damage detection of beam structure. And results of harmony search and micro genetic algorithm are compared and evaluated. Thirdly, numerical model was implemented for harbor caisson structure and damage scenario was determined. Lastly, damage detection was performed by proposed method and utility of proposed method is verified.

Study on TSD Characteristics of LiF ( Mg , Cu , P ) Single Crystal (LiF ( Mg , Cu , P ) 단결정의 TSD 특성에 관한 연구)

  • 도시홍
    • Journal of the Korean Society of Fisheries and Ocean Technology
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    • v.26 no.1
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    • pp.8-13
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    • 1990
  • The microscopic relaxation parameters for the single crystal were measured by using thermally stimulated depolarization (TSD). Initial rise method, various heating rate method and total glow peak method were used for the determination of the activation energy and Debye relaxation time from TSD glow curves. Activation energy, pre-exponential factor and relaxation time for impurity-vacancy dipole reorientation were 0.55eV, 1.97$\times$10 super(-12) sec and 12.19sec in average, respectively. Dielectric dissipation factor for the crystal was calculated from the measured TSD glow curve, its value being about 3$\times$10 super(-2).

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Multi-floor Layout Model for Topsides of Floating Offshore Plant using the Optimization Technique (최적화 기법을 이용한 부유식 해양 플랜트 상부 구조의 다층 배치 모델)

  • Jeong, Se-Yong;Roh, Myung-Il;Shin, Hyunkyoung
    • Journal of the Society of Naval Architects of Korea
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    • v.52 no.1
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    • pp.77-87
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    • 2015
  • For a floating offshore plant such as FPSO(Floating, Production, Storage, and Off-loading unit), various equipment should be installed in the restricted space, as compared with an onshore plant. The requirement for an optimal layout method of the plant has been increased in these days. Thus, a layout method of the floating offshore plant was proposed in this study. For this, an optimization problem for layout design was mathematically formulated, and then an optimization algorithm based on the genetic algorithm was implemented with C++ language in order to solve it. Finally, the proposed method was applied to an example of FPSO topsides. As a result, it was shown that the proposed method can be applied to layout design of the floating offshore plant such as FPSO.

Molecular Analysis and Enzymatic Characterization of Cathepsin B from Olive Flounder (Paralichthys olivaceus) (넙치 카텝신 B의 분자생물학적 분석 및 효소학적 특성 연구)

  • Jo, Hee-Sung;Kim, Na-Young;Lee, Hyung-Ho;Chung, Joon-Ki
    • Journal of Fisheries and Marine Sciences Education
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    • v.26 no.3
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    • pp.543-552
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    • 2014
  • Papain family중 하나인 cysteine protease는 근골격계 질환 치료를 위한target molecule로 인식 되어왔으며 Cathepsin B 는 단백질 분해의 초기과정에 관여하는 cysteine proteases 중 하나이다. 본 연구는 넙치의 cathepsin B 유전자의 발현 양상과 넙치 cathepsin B(PoCtB)의 클로닝, 발현 및 효소특성을 분석하였다. cDNA Library Screening을 이용하여 넙치의 cDNA를 클로닝하였다. 넙치의 동정된 cathepsin B 유전자는 993bp의 open reading frame과 330개의 아미노산으로 이루어져있다. Cathepsin B의 propeptide region 내에 GNFD motif와 occluding loop 가 존재함으로써 이것이 명백하게 cathepsin B group이라는 것을 보여주며, 계통 유전학적 분석 결과 다른 종의 cathepsin B에 비해 초창기에 분화되어 나온 것으로 사료된다. mature enzyme인 maPoCtB은 fusion protein인 glutathione S-transferase를 포함하는 pGEX-4T-1 vector에 삽입하여 E.coli 균주인 $DH5{\alpha}$ 내에 발현시켰다. 재조합 단백질인 PoCtB을 과발현 시킨 결과 53kDa의 분자량을 가진다. 넙치 cathepsin B 활성은 Z-Arg-Arg-AMC와 같은 fluorogenic 펩타이드 기질을 이용하여 측정되었고 적정 pH는 pH.7.5 이다.

The complete genome sequence of a white spot syndrome virus isolated from Litopenaeus vannamei (흰다리새우(Litopenaeus vannamei )에서 분리된 WSSV의 전장유전체 분석)

  • Lee, A-reum;Kong, Kyoung-Hui;Kim, Hwi-Jin;Oh, Myung-Joo;Kim, Do-Hyung;Kim, Jong-Oh;Kim, Wi-Sik
    • Journal of fish pathology
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    • v.35 no.1
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    • pp.129-133
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    • 2022
  • The full genome sequence of a Korean white spot syndrome virus (WSSV, isolate: WSSV-GoC18) is presented here. We obtained a total of 12,320,554 reads with 291,172 bases, 170 gene, and 170 coding DNA sequence, which were assembled in 1 contig. Phylogenetic analysis revealed that the WSSV-GoC18 was closely related to Chinese isolate (WSSV-PC) and distinctly different with previously reported a Korean isolate (WSSV K-LV1). The complete genome sequence of WSSV isolates will be of great help in molecular epidemiological studies, contributing to molecular diagnosis and disease prevention in shrimp aquaculture.

Population genetics of sand crab Ovalipes punctatus in Korean waters (한국 연근해에 출현하는 깨다시꽃게 개체군의 유전학적 분석)

  • Hyeon Gyu LEE;Se Hun MYOUNG;Jeong-Hoon LEE;Youn Hee CHOI
    • Journal of the Korean Society of Fisheries and Ocean Technology
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    • v.59 no.3
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    • pp.253-262
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    • 2023
  • To identify sand crab Ovalipes punctatus populations and establish management units for each population, mtDNA COI regions were analyzed. As a result, the clade of O. punctatus in Korea were separated by two with a genetic distance of 0.17-2.08%, and there was no significant difference in the result of pairwise FST values representing genetic differentiation by sampling areas (p > 0.05). Also, no geographical separation found in the distribution of haplotypes and the results of the haplotype network. This result suggests that O. punctatus larvae were dispersed for a long time by the ocean current by suffering meroplanktonic period for 1 month, and increased the gene flow due to the development of the swimming legs for the increase in mobility. Therefore, in the results of mtDNA COI region analysis of O. punctatus in the East Sea, Yellow Sea, South Sea and East China Sea (Ieodo) of Korea, no clear intra-species differentiation was found.

First Record of the Smoothtail Mobula, Mobula thurstoni (Myliobatiformes: Myliobatidae) in Southern Korea (한국 여수에서 채집된 매가오리과 (Myliobatidae) 어류 첫기록종, Mobula thurstoni)

  • Myoung, Se Hun;Song, Young Sun;Kang, Chung-Bae;Choi, Hong-In;Kim, Jong-Gwan;Yoon, Moongeun;Im, Jaebok;Han, Dong-Jin
    • Korean Journal of Ichthyology
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    • v.33 no.2
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    • pp.148-154
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    • 2021
  • Two specimens (1770~1850 mm disc width) of Mobula thurstoni, belonging to the family Myliobatidae, order Myliobatiformes, were first collected from the central coast of the Southern Sea of Korea in September 2018. This species is characterized by an anterior margin of disc with double curvature, a white-tipped dorsal fin, and the absence of a caudal spine. This species is morphologically similar to Mobula kuhlii, but has an anterior margin of pectoral fins with a double curvature and the dorsal coloration is bluish black rather than white. In addition, M. thurstoni was well distinguished from M. kuhlii as determined by mitochondrial DNA 16S rRNA sequences with genetic distances ranging from 0.030 to 0.069. The Korean name 'Mae-kkeun-kko-li-jwi-ga-o-li' is proposed for the species M. thurstoni.

A Study on the Cytogenetics and Differentiation of Marine Animals (해양동물의 세포유전과 분화연구)

  • 손진기
    • Development and Reproduction
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    • v.6 no.2
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    • pp.71-76
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    • 2002
  • Present study was aimed to summary the recent reports of chromosomal technology such like a polyploidv, sex differentiation, gynogenesis, transgenic fish and gene manipulation. Triploid cells for rainbow trout and channel catfish were induced through thermal shocks of varying temperature levels and produced as a industrial use. A monosex fish with homogametic females of 15 species of high valued fish were produced by exposing to irradiation. It seemed that different irradiation was suitable to inactivate the sperm and block the formation in producing the gynogenetic diploids. Since 1985, transgenic fish have been successfully produced by microinjecting or electroporating desired foreign DNA into unfertilized or newly fertilized eggs using about 40 fish species. More recently, transgenic fish have also been produced by infecting newly fertilized eggs with pantropic, defective retroviral vectors carrying desired foreign DNA. These transgenic fish can serve as excellent experimental models for basic scientific investigations as well as in marine biotechnological applications.

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Isolation and Characterization of a Marine Derived Bacterium Glaciecola sp. SL-12 Producing β-agarase (한천분해효소를 생산하는 해양유래 세균 Glaciecola sp. SL-12의 분리 및 특성)

  • Lee, Dong-Geun;Lee, Ok-Hee;Jang, Hyo-Jung;Jang, Min-Kyung;Yoo, Ki-Hwan;Lee, Sang-Hyeon
    • Journal of Life Science
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    • v.18 no.1
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    • pp.58-62
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    • 2008
  • A novel agar-degrading bacterium SL-12 was isolated from seashore of Kijang at Busan, Korea, and cultured in marine broth 2216 media. Isolated bacterium SL-12 was identified as Glaciecola genus by 16S rDNA sequencing with 98% identity. The optimum pH of the enzyme activity was 7.0 and the optimum temperature for the reaction was $30^{\circ}C$. The enzyme hydrolyzed neoagarohexaose to yield neoagarobiose as the main product, indicating that the enzyme is ${\beta}$-agarase. Thus, isolated bacterium and the enzyme would be useful for the industrial production of neoagarobiose.