Journal of fish pathology (한국어병학회지)

The Korean Society of Fish Pathology (한국어병학회)
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The complete genome sequence of a white spot syndrome virus isolated from Litopenaeus vannamei

흰다리새우(Litopenaeus vannamei )에서 분리된 WSSV의 전장유전체 분석

  • Lee, A-reum (School of Marine and Fisheries Life Science, Pukyong National University) ;
  • Kong, Kyoung-Hui (Department of Aqualife Medicine, Chonnam National University) ;
  • Kim, Hwi-Jin (Department of Aqualife Medicine, Chonnam National University) ;
  • Oh, Myung-Joo (Department of Aqualife Medicine, Chonnam National University) ;
  • Kim, Do-Hyung (Department of Aquatic life Medicine, Pukyong National University) ;
  • Kim, Jong-Oh (School of Marine and Fisheries Life Science, Pukyong National University) ;
  • Kim, Wi-Sik (Department of Aqualife Medicine, Chonnam National University)
  • 이아름 (부경대학교 해양수산생명과학부) ;
  • 공경희 (전남대학교 수산생명의학과) ;
  • 김휘진 (전남대학교 수산생명의학과) ;
  • 오명주 (전남대학교 수산생명의학과) ;
  • 김도형 (부경대학교 수산생명의학과) ;
  • 김종오 (부경대학교 해양수산생명과학부) ;
  • 김위식 (전남대학교 수산생명의학과)
  • Received : 2022.05.30
  • Accepted : 2022.06.08
  • Published : 2022.06.30
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Abstract

The full genome sequence of a Korean white spot syndrome virus (WSSV, isolate: WSSV-GoC18) is presented here. We obtained a total of 12,320,554 reads with 291,172 bases, 170 gene, and 170 coding DNA sequence, which were assembled in 1 contig. Phylogenetic analysis revealed that the WSSV-GoC18 was closely related to Chinese isolate (WSSV-PC) and distinctly different with previously reported a Korean isolate (WSSV K-LV1). The complete genome sequence of WSSV isolates will be of great help in molecular epidemiological studies, contributing to molecular diagnosis and disease prevention in shrimp aquaculture.

Keywords

Acknowledgement

이 논문은 2019년도 해양수산부 재원으로 해양수산과학기술진흥원의 지원을 받아 수행된 연구임 (20190392, 수산생물 검역용 신속 및 정밀진단기술 개발).

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